HHsearch alignment for GI: 254780604 and conserved domain: cd00616

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.84  E-value=1.7e-18  Score=138.94  Aligned_cols=284  Identities=19%  Similarity=0.212  Sum_probs=183.3

Q ss_pred             CCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCC-CCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEECC------
Q ss_conf             64028999998887349973377405652012220234-67788723421321116752014531651353167------
Q gi|254780604|r   88 TNYYHVMLEKELATLHGKKAALIFNSGYIANWATIGTL-CSQIDNIICFSDSHNHASIIEGINKARCKKVIWNH------  160 (401)
Q Consensus        88 ~~~~~~~LE~~la~~~g~e~al~~~SG~~An~~~i~~l-~~~~d~ii~~~D~~~HaSi~~g~~l~~a~~~~f~H------  160 (401)
T Consensus        16 ~G~~v~~fE~~~~~~~g~k~~v~~~sgt~Al~lal~~l~~~~gdeVi~p~--~t~~at~~ai~~~G~~pv~~Di~~~t~~   93 (352)
T cd00616          16 LGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPS--FTFVATANAILLLGATPVFVDIDPDTYN   93 (352)
T ss_pred             CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECC--CCCHHHHHHHHHCCCEEEEEECCCCCCC
T ss_conf             98769999999999978593999768899999999986978839999899--7639899999985998998407778577


Q ss_pred             CCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCH
Q ss_conf             99889888674066335623621674356773368999999840147189971211001256025899999720200101
Q gi|254780604|r  161 NDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAPIKEICDLADQYNAITYIDEVHAVGIHGSCGAGISEREGIMNRITI  240 (401)
Q Consensus       161 nD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~apL~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~~~~~g~~~~~di  240 (401)
T Consensus        94 id~~~l~~~i~---~~tkaIi~vh----~~G~~~d~~~i~~~~~~~~i~lIeDaA~a~Gs~~-~~~----~~G~~g--d~  159 (352)
T cd00616          94 IDPELIEAAIT---PRTKAIIPVH----LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATY-KGR----KVGTFG--DA  159 (352)
T ss_pred             CCHHHHHHHCC---CCCCEEEEEC----CCCCCCCHHHHHHHHHHCCCEEEEHHHHHCCCCC-CCE----ECCCCC--CC
T ss_conf             58899997628---6870999968----9898668899999999779899802200216834-671----256643--42


Q ss_pred             HHCCC--CCCCCC-CEEEEECC-HHHHHH---HHCCCCC-----C-----CCCCCCCCHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             10144--432222-31687548-445000---0013322-----2-----333444431478899876432012016888
Q gi|254780604|r  241 ISGTL--AKGFGT-FGGYIAAS-ENLCDF---IRSFASG-----F-----IFSTSLPPAIASASVTSIQYIKQHYDERKK  303 (401)
Q Consensus       241 ~~~Tl--sKa~g~-~GG~i~g~-~~~~~~---l~~~~~~-----~-----ifs~~l~p~~~aa~~~al~~l~~~~~~~~~  303 (401)
T Consensus       160 ~~fSF~~~K~it~geGG~i~tn~~~~~~~~~~lr~~G~~~~~~~~~~~~~G~N~rmsel~Aaigl~qLk~ld~---~~~~  236 (352)
T cd00616         160 GAFSFHPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDE---IIAR  236 (352)
T ss_pred             CCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH---HHHH
T ss_conf             5344787756767773499969999999999999659669988524673683422588899999999998899---9999


Q ss_pred             HHHHHHHHHHHHHHCC-CCCCC--CC----CCEEEEEECCHH--HHHHHHHHHHHHCCEEEEEECCCCCCC---------
Q ss_conf             8999987666566449-83037--89----865999968979--999999999973790998404888888---------
Q gi|254780604|r  304 YLERVKQLRHSLENKA-IPCIP--NE----SHIIPIMVGDSH--KCTQISNILLKEFGIYIQPINYPTVAK---------  365 (401)
Q Consensus       304 l~~~~~~l~~~L~~~g-~~~~~--~~----s~Ivpi~~g~~~--~~~~~~~~lL~e~Gi~v~~i~~PtVp~---------  365 (401)
T Consensus       237 R~~i~~~Y~~~L~~~~~i~~~~~~~~~~~~~~~~~i~l~~~~~~~R~~l~~~-L~~~gI~~~~~y~p~~~~~~~~~~~~~  315 (352)
T cd00616         237 RREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEA-LKEAGIETRVHYPPLHHQPPYKKLLGY  315 (352)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHH-HHHCCCCEEEECCCHHHCHHHHHHCCC
T ss_conf             9999999999837899816166699983355799999865021059999999-998799858028333338498972599


Q ss_pred             --C---------CCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             --8---------7218996185799999999999999
Q gi|254780604|r  366 --K---------KERLRVTLTPLHTDSDIEHLVSSLE  391 (401)
Q Consensus       366 --g---------~~rlRi~l~a~ht~edid~~~~~l~  391 (401)
T Consensus       316 ~~~~~pna~~i~~~~l~LP~~~~Lt~~di~~I~~~IK  352 (352)
T cd00616         316 PPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             CCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf             8899989999984979898999879999999999749