HHsearch alignment for GI: 254780604 and conserved domain: pfam01212
>pfam01212 Beta_elim_lyase Beta-eliminating lyase.
Probab=99.85 E-value=1.2e-19 Score=146.35 Aligned_cols=246 Identities=22% Similarity=0.272 Sum_probs=167.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEEEHHHH
Q ss_conf 98899999999999829877641000276402899999888734997337740565201222023467788723421321
Q gi|254780604|r 60 KHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLHGKKAALIFNSGYIANWATIGTLCSQIDNIICFSDSH 139 (401)
Q Consensus 60 ~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~g~e~al~~~SG~~An~~~i~~l~~~~d~ii~~~D~~ 139 (401)
T Consensus 10 ~t~~m~~a~~~a~----~Gdd----~Yg~D~t~~~le~~~a~l~G~eaalfv~sGT~AN~ial~~~~~~g~~vi~--~~~ 79 (288)
T pfam01212 10 PTPAMREAMAAAM----VGDE----VYGGDPTVNRLEDRVAELFGKEAALFVPSGTMANQLALMAHCRRGDEVIC--GEP 79 (288)
T ss_pred CCHHHHHHHHHCC----CCCC----CCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCEEEE--ECC
T ss_conf 9999999998233----5773----22679899999999999869982998688679999999983889988998--357
Q ss_pred HHHHHHH--HH-HHCCCCEEEEC-----CCCHHHHHHHHHHCCC---CCCCEEECCCC-CCCCCCHH---HHHHHHHHHH
Q ss_conf 1167520--14-53165135316-----7998898886740663---35623621674-35677336---8999999840
Q gi|254780604|r 140 NHASIIE--GI-NKARCKKVIWN-----HNDLEDLEKNLAATDL---SIPKIIIFESI-YSMDGDIA---PIKEICDLAD 204 (401)
Q Consensus 140 ~HaSi~~--g~-~l~~a~~~~f~-----HnD~~~Le~~L~~~~~---~~~~iIv~e~v-~Sm~G~~a---pL~~l~~l~~ 204 (401)
T Consensus 80 sHi~~~E~ga~~~~~G~~~~~l~~~~~G~~~~~~l~~~i~~~~~~h~~~~~~v~le~t~n~~gG~~~~~~el~~i~~~a~ 159 (288)
T pfam01212 80 AHIYFDETGGHAELGGAQPVPLPGAEAGKLDLEDLEAAIRPVGDIHFPPTGLISLENTHNSAGGQVVSLEELREIRAIAR 159 (288)
T ss_pred CCCEEECCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEECCHHHHHHHHHHHH
T ss_conf 67654567779998298258447877898299999998764498546765479999554488966557899999999999
Q ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCC-EEEEECCHHHHHHHHCCCCCCCCCCCCCC--
Q ss_conf 147189971211001256025899999720200101101444322223-16875484450000013322233344443--
Q gi|254780604|r 205 QYNAITYIDEVHAVGIHGSCGAGISEREGIMNRITIISGTLAKGFGTF-GGYIAASENLCDFIRSFASGFIFSTSLPP-- 281 (401)
Q Consensus 205 ~~~~~LivDEAH~~Gv~G~~G~G~~~~~g~~~~~di~~~TlsKa~g~~-GG~i~g~~~~~~~l~~~~~~~ifs~~l~p-- 281 (401)
T Consensus 160 ~~gl~lHmDGARl~nA~~a~~~~~~e~~---~~~D~v~~~~sK~lga~~Gavl~g~~~~i~~a~~~rk~--lGg~mrq~g 234 (288)
T pfam01212 160 EHGIPLHLDGARLANAAVALGVIVKEIT---SYADSVSMSLSKGLGAPVGSVLAGSDDFIAYAIRQRKY--LGGGMRQAG 234 (288)
T ss_pred HCCCEEEEHHHHHHHHHHHCCCCHHHHH---CCCCEEEEEEECCCCCCEEEEEEECHHHHHHHHHHHHH--HHCCHHHHH
T ss_conf 8099376308789888876099988985---46888999843578861003898289999999999999--726425667
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 147889987643201201688889999876665664498303
Q gi|254780604|r 282 AIASASVTSIQYIKQHYDERKKYLERVKQLRHSLENKAIPCI 323 (401)
Q Consensus 282 ~~~aa~~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~g~~~~ 323 (401)
T Consensus 235 ~~aaa~~~aL~~---~~~~l~~dh~~A~~La~~l~~~~~~~~ 273 (288)
T pfam01212 235 VLAAAGLRALEE---GVARLGRDHATARRLAEGLELLRGVIP 273 (288)
T ss_pred HHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999980---898888889999999999976899322