HHsearch alignment for GI: 254780604 and conserved domain: pfam01276
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=99.88 E-value=3e-21 Score=156.61 Aligned_cols=225 Identities=18% Similarity=0.111 Sum_probs=157.9
Q ss_pred CCCHHHHHHHHHHHHCCCCCEEEEECCC-CCHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEECC------
Q ss_conf 6402899999888734997337740565-201222023467788723421321116752014531651353167------
Q gi|254780604|r 88 TNYYHVMLEKELATLHGKKAALIFNSGY-IANWATIGTLCSQIDNIICFSDSHNHASIIEGINKARCKKVIWNH------ 160 (401)
Q Consensus 88 ~~~~~~~LE~~la~~~g~e~al~~~SG~-~An~~~i~~l~~~~d~ii~~~D~~~HaSi~~g~~l~~a~~~~f~H------ 160 (401)
T Consensus 64 p~g~I~eAq~~aA~~fga~~t~flvnGsT~g~~a~i~a~~~~Gd~Vlv--~RN~HkSv~~al~l~g~~Pvyl~p~~~~~g 141 (417)
T pfam01276 64 HSGPIKEAQKYAARVFGADKSYFVVNGTSGANKTVGMAVCTPGDTVLI--DRNCHKSIHHALMMSGATPVYLEPTRNAYG 141 (417)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEE--ECCCHHHHHHHHHHCCCEEEEECCCCCCCC
T ss_conf 763999999999998399936998468309999999974389998997--164189999999986985899536424346
Q ss_pred ---------CCHHHHHHHHHHCCCCCC--CEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCC-CCCHHHHH
Q ss_conf ---------998898886740663356--236216743567733689999998401471899712110012-56025899
Q gi|254780604|r 161 ---------NDLEDLEKNLAATDLSIP--KIIIFESIYSMDGDIAPIKEICDLADQYNAITYIDEVHAVGI-HGSCGAGI 228 (401)
Q Consensus 161 ---------nD~~~Le~~L~~~~~~~~--~iIv~e~v~Sm~G~~apL~~l~~l~~~~~~~LivDEAH~~Gv-~G~~G~G~ 228 (401)
T Consensus 142 i~~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~PtY--~G~~~di~~i~~~~h~~~~~llvDEAhGah~~F~plp~~a 219 (417)
T pfam01276 142 IIGGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGTY--DGTIYNAKEIVDTLGHLSDYILFDSAWVGYEQFIPIYADA 219 (417)
T ss_pred CCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCC--CEEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHH
T ss_conf 61588825459999999998587656850899989998--7065289999999863398799978875202468783346
Q ss_pred HHHHHCC---CCCCHHHCCCCCCCCC--CEEEEECC-HHHHH--HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH--CCH
Q ss_conf 9997202---0010110144432222--31687548-44500--0001332223334444314788998764320--120
Q gi|254780604|r 229 SEREGIM---NRITIISGTLAKGFGT--FGGYIAAS-ENLCD--FIRSFASGFIFSTSLPPAIASASVTSIQYIK--QHY 298 (401)
Q Consensus 229 ~~~~g~~---~~~di~~~TlsKa~g~--~GG~i~g~-~~~~~--~l~~~~~~~ifs~~l~p~~~aa~~~al~~l~--~~~ 298 (401)
T Consensus 220 -~~~gad~~~~~~~~vvqS~HKtL~altQ~s~Lh~~~~~~~~~~~~~-~~l~~~qTTSPsY~lmASLD~ar~~m~~~~G~ 297 (417)
T pfam01276 220 -SPMGGDNVNDPGIIVTQSVHKLLAAFSQASQIHKKDSHIVNHKRFN-EAFMMHTSTSPFYPIVASLDVAAAMMEGNSGR 297 (417)
T ss_pred -HHCCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCCCCHHHHH-HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -6567886667722798611113543043432121678778999999-99997738874899999999999997535549
Q ss_pred HHHHHHHHHHHHHHHHHHHC
Q ss_conf 16888899998766656644
Q gi|254780604|r 299 DERKKYLERVKQLRHSLENK 318 (401)
Q Consensus 299 ~~~~~l~~~~~~l~~~L~~~ 318 (401)
T Consensus 298 ~l~~~~i~~a~~~R~~i~~l 317 (417)
T pfam01276 298 RLWQESLERAIEFRKEIKTL 317 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999864