HHsearch alignment for GI: 254780605 and conserved domain: cd01091
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=1.3e-39 Score=295.97 Aligned_cols=215 Identities=20% Similarity=0.284 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHH--CCCCCCCHHHHHHHHHHH---HHHHHHCCCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 98799998443899999987-533210--012453018899999998---754330278555541000012335-43222
Q gi|254780605|r 319 IEGMQTAHIQDGVAMVYFLF-WFYSQS--LETITEIDIIKKLERCRE---EIGCKMRNPLRDIAFNTIAASGPH-AAIIH 391 (609)
Q Consensus 319 I~~mr~Ahi~DgvAl~kfl~-wL~~~~--~~~iTE~~ia~~Le~~R~---~~~~~~~~~~~~~SF~TIva~G~N-~AipH 391 (609)
T Consensus 1 l~~ik~as~~s~~~~~~~~~~~~~~iiD~e~k~~h~~l~~~~e~~i~d~kk~~~~~d~~~vd~~Y~PIVqSGg~y~~~~~ 80 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLDWCYPPIIQSGGNYDLLKS 80 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCHHCCCCCCHHHCCEECCCCEEECCCCCCCCC
T ss_conf 93789999999999999999999988401212139999999999862702203789978875324564148876235757
Q ss_pred CCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 24554332050389879983032010561222143210378888843336677888889972178978888999987366
Q gi|254780605|r 392 YQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIF 471 (609)
Q Consensus 392 Y~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~ 471 (609)
T Consensus 81 ~~~---~d~~~~~~g~Il~d~G~rYk~YcSditRT~~v-~pt~~q~~~Y~~vl~aq~~~i~~~kp-G~~~~~v~~~a~~~ 155 (243)
T cd01091 81 SSS---SDKLLYHFGVIICSLGARYKSYCSNIARTFLI-DPTSEQQKNYNFLLALQEEILKELKP-GAKLSDVYQKTLDY 155 (243)
T ss_pred CCC---CCCCCCCCCEEEEECCCCCCCEECCCEEEEEE-CCCHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHH
T ss_conf 788---75423779989998691357780265658985-79999999999999999999999726-99689999999999
Q ss_pred HHHCC--C--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCEE----------ECCCCCEEEEEEEEEE
Q ss_conf 77418--6--54776432321135607788623778986005698788468603----------5687521500259997
Q gi|254780605|r 472 LWKYG--A--DFAHGVGHGVGSFLPVHEGPQGISRTNQEPLLPGMILSNEPGYY----------RCGAFGIRIENVLCVS 537 (609)
Q Consensus 472 l~~~g--~--dy~HgtGHGVG~~l~VHE~P~~is~~~~~~l~~Gmv~s~EPG~Y----------~~g~~GiRIEn~v~v~ 537 (609)
T Consensus 156 I~~~~~~l~~~f~h~~GhgiG--lE~hE~~~~l~~kn~~~lk~GMvftV~~Gf~nl~~~~~~~~~~k~yal~I~DtV~Vt 233 (243)
T cd01091 156 IKKKKPELEPNFTKNLGFGIG--LEFRESSLIINAKNDRKLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVT 233 (243)
T ss_pred HHHHHHHHHHHCCCCCCCEEC--EEECCCCCCCCCCCCEECCCCCEEEEECCEEECCCCCCCCCCCCEEEEEEEEEEEEC
T ss_conf 998778887257667623225--575246654489974041799789996550555687666766773699996489985
Q ss_pred ECC
Q ss_conf 278
Q gi|254780605|r 538 EPE 540 (609)
Q Consensus 538 ~~~ 540 (609)
T Consensus 234 e~g 236 (243)
T cd01091 234 EDE 236 (243)
T ss_pred CCC
T ss_conf 899