HHsearch results for GI: 254780605 and protein with PDBid: 1xgs_A

>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=99.96  E-value=4.2e-28  Score=214.21  Aligned_cols=201  Identities=16%  Similarity=0.127  Sum_probs=158.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99879999844389999998753321001245301889999999875433027855554100001233543222245543
Q gi|254780605|r  318 EIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQ  397 (609)
Q Consensus       318 EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipHY~~~~~  397 (609)
                      ||+.||+|-..-..|+    ..+.+.+..|+||.|+++.++.+..+.++       .+||+++++.|.++  .||.|.+.
T Consensus         2 EIe~~r~Ag~Ia~~~~----~~~~~~ikpG~te~el~~~~~~~i~~~G~-------~~afp~~is~n~~~--~h~~P~~~   68 (295)
T 1xgs_A            2 DTEKLMKAGEIAKKVR----EKAIKLARPGMLLLELAESIEKMIMELGG-------KPAFPVNLSINEIA--AHYTPYKG   68 (295)
T ss_dssp             CHHHHHHHHHHHHHHH----HHHHHHCCTTCBHHHHHHHHHHHHHHTTC-------EESSCCEEEETTEE--ECCCCCTT
T ss_pred             HHHHHHHHHHHHHHHH----HHHHHHCCCCCCHHHHHHHHHHHHHHCCC-------CCCCCEEEECCCCC--CCCCCCCC
T ss_conf             1899999999999999----99998786899499999999999998799-------27787058818752--57678888


Q ss_pred             CCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             32050389879983032010561222143210378888843336677888889972178978888999987366774186
Q gi|254780605|r  398 SNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGA  477 (609)
Q Consensus       398 s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~  477 (609)
                      ++++|++||+++||.|++|.||++|+|||+.+|++.++.   +..++.+.-+..++.. +|++..+++.++++++.++|+
T Consensus        69 ~~~~l~~GDiV~iD~g~~~~GY~aD~arT~~vg~~~~~l---~~a~~~al~~ai~~ik-pG~~~~eI~~~i~~~~~~~g~  144 (295)
T 1xgs_A           69 DTTVLKEGDYLKIDVGVHIDGFIADTAVTVRVGMEEDEL---MEAAKEALNAAISVAR-AGVEIKELGKAIENEIRKRGF  144 (295)
T ss_dssp             CCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTSCCCHH---HHHHHHHHHHHHHHCS-TTCBTHHHHHHHHHHHHTTTC
T ss_pred             CCEEECCCCEEEEEECEEECCEEECCEEEEECCCCCHHH---HHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHCCC
T ss_conf             885723899999972314773873034177614320789---9999999999888745-997212677999999998187


Q ss_pred             C-CCCCCCCCCCCCCCCCCCCCCC----CCCCCCEECCCCEEEECCCEEECCCCCEEEEEEEEEEE
Q ss_conf             5-4776432321135607788623----77898600569878846860356875215002599972
Q gi|254780605|r  478 D-FAHGVGHGVGSFLPVHEGPQGI----SRTNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSE  538 (609)
Q Consensus       478 d-y~HgtGHGVG~~l~VHE~P~~i----s~~~~~~l~~Gmv~s~EPG~Y~~g~~GiRIEn~v~v~~  538 (609)
                      . +.+.+|||+|.+ .+||+|. |    .+..+..|+||||+|+||.+. .|.+.++-.+...+..
T Consensus       145 ~~~~~~~gH~ig~~-~~h~~~~-i~~~~~~~~~~~l~~GmV~aIEP~~s-~G~g~v~~~~~~~~~~  207 (295)
T 1xgs_A          145 KPIVNLSGHKIERY-KLHAGIS-IPNIYRPHDNYVLKEGDVFAIEPFAT-IGAGQVIEVPPTLIYM  207 (295)
T ss_dssp             EECTTCCEEECBTT-BSSCSCE-ECSSCCTTCCCBCCTTCEEEECCEEE-SSCSCEEEEEEEEEEE
T ss_pred             CCCCCCCCCCCCCC-CCCCCCE-ECCCCCCCCCCEEEECEEEEEEEEEE-CCCCEEEECCCCCEEE
T ss_conf             62235368762575-5658987-63643589997888880898740686-4898078779976899