HHsearch results for GI: 254780605 and protein with PDBid: 3biq_A
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, activator, chromosomal protein, coiled coil, DNA damage; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=97.04 E-value=0.017 Score=35.80 Aligned_cols=141 Identities=12% Similarity=0.157 Sum_probs=80.6
Q ss_pred CHHHHHHHHHHHHHHC--CCCEEEEE--CCCCCCCCCCCCHHCHHHHHHCCCCCCEEEEEECCCCEEEECCHH---HHHH
Q ss_conf 5589999999999974--99799960--888747860667106100441467650077895783679978814---8999
Q gi|254780605|r 13 KTFERVHNLRSCFDSL--GMDAFLVP--RVDEYRGEFVDKGSERLAWLSGFTGSAGIAIVLRQKSVIFVDGRY---TLQV 85 (609)
Q Consensus 13 ~~~erL~~LR~~m~~~--~idayiip--~~D~h~sEyv~~~~~rl~~isGFtGSaG~aiIt~~~a~L~tDgRY---~lQA 85 (609)
.=.+||++||+.|+++ ++|+.+|- ++|.- +-|. ....-..|+|||.......|++.+..++.++++. +.++
T Consensus 12 ~f~~Rl~~l~~~~~~~~~~~dal~i~~g~~~~d-~~Y~-~~~~~~~yLtG~~~p~t~lvl~~~~~~il~~~~k~~~~~~~ 89 (467)
T 3biq_A 12 VFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAE-NPYQ-KTTILHNWLLSYEFPATLIALVPGKVIIITSSAKAKHLQKA 89 (467)
T ss_dssp HHHHHHHHHHHHGGGSTTCCSEEEEEECSCCTT-STTC-HHHHHHHHHHSSCCSSEEEEEETTEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC-CCCC-CCCCCCEECCCCCCCCEEEEECCCEEEEEECCCCCEEECCC
T ss_conf 999999999998774046999899982899877-3440-26877153268887767999818908999579865122242
Q ss_pred HHHHCCC----CEEEEECCCCCHH-------HHHHHHCCCCCEEEECCEE-CC---HHH-HHHHHHHHHHCCCEEEECCC
Q ss_conf 9861967----1799866899999-------9888743799889965634-13---999-99999985334761997050
Q gi|254780605|r 86 EKEVDTA----LFTIKNIAIEPLH-------AWISEHGFVGLRLGLDSRL-HS---SFE-VDLLQKSLDKIEGVIVDVPY 149 (609)
Q Consensus 86 ~~el~~~----~~~~~~~~~~~~~-------~wl~~~~~~g~~IG~Dp~l-~s---~~~-~~~l~~~l~~~~~~l~~~~~ 149 (609)
....... ...+......... .++..-...+.++|...+- .+ ... ...+...+...++.++.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~d~~~g~~~~~~~~~~~~~~~~~~~~~vd~~- 168 (467)
T 3biq_A 90 IDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAVKENEFNVIDIS- 168 (467)
T ss_dssp HGGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHHHHHTCEEEECH-
T ss_pred CHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECH-
T ss_conf 0344401138625899804774212999999999997447968999434220577889999999986652798288758-
Q ss_pred HHHHHHH
Q ss_conf 0111220
Q gi|254780605|r 150 NPIDSLW 156 (609)
Q Consensus 150 NlVD~iW 156 (609)
.+|+.+.
T Consensus 169 ~~l~~lR 175 (467)
T 3biq_A 169 LGLSKVW 175 (467)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
T ss_conf 9999999