HHsearch results for GI: 254780605 and protein with PDBid: 3cb6_A
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H3/H4 chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=96.58 E-value=0.043 Score=33.02 Aligned_cols=142 Identities=13% Similarity=0.140 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHHH--------CCCCEEEEECC-CCCCCCCCCCHHCHHHHHHCCCCCCEEEEEECCCCEEEECCHHH-
Q ss_conf 558999999999997--------49979996088-87478606671061004414676500778957836799788148-
Q gi|254780605|r 13 KTFERVHNLRSCFDS--------LGMDAFLVPRV-DEYRGEFVDKGSERLAWLSGFTGSAGIAIVLRQKSVIFVDGRYT- 82 (609)
Q Consensus 13 ~~~erL~~LR~~m~~--------~~idayiip~~-D~h~sEyv~~~~~rl~~isGFtGSaG~aiIt~~~a~L~tDgRY~- 82 (609)
.=.+||++|++.+++ .++|+.+|... -..-+.|. ....-..||+||.-..-..|+++++.++.|..+..
T Consensus 12 ~F~~Rl~~l~~~~~~~~~~~~~~~~~d~i~~~~g~~~~~~~y~-k~~~~~~wL~G~e~pdt~lvl~~~~~~~l~~~kk~~ 90 (444)
T 3cb6_A 12 TFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQ-KSTALHTWLLGYEFPSTLILLEKHRITILTSVNKAN 90 (444)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCCTTCCCC-HHHHHHHHHHSSCCSSEEEEEETTEEEEEEEHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCCCE-ECCHHHEHHHCCCCCCEEEEECCCCEEEEECCCHHH
T ss_conf 9999999999997634564034438998999438877676421-122010123178775669998389389981673688
Q ss_pred -HHHHHHHCCCCEE--EEECCCC------CHHHHHHHHCCCCCEEEECCE-ECCHHHHHHHHHHHHH--CCCEEEECCCH
Q ss_conf -9999861967179--9866899------999988874379988996563-4139999999998533--47619970500
Q gi|254780605|r 83 -LQVEKEVDTALFT--IKNIAIE------PLHAWISEHGFVGLRLGLDSR-LHSSFEVDLLQKSLDK--IEGVIVDVPYN 150 (609)
Q Consensus 83 -lQA~~el~~~~~~--~~~~~~~------~~~~wl~~~~~~g~~IG~Dp~-l~s~~~~~~l~~~l~~--~~~~l~~~~~N 150 (609)
++-..+....... +...... .....+......+.+||+-++ .........+.+.+++ .+..++..+ +
T Consensus 91 ~l~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~i~~~~~~vG~~~kd~~~g~~~~~~~~~l~~~~~~~~~vD~s-~ 169 (444)
T 3cb6_A 91 MLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVFPKDKTQGKFINEWDSIFEPVKSEFNLVDAS-L 169 (444)
T ss_dssp TTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHHHHHTTTSEEEECTTCCCCSHHHHHHHHHHTTTGGGSEEEECH-H
T ss_pred HHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECH-H
T ss_conf 888775212568874899704664225779999999976326608997133555457999999998605998599678-9
Q ss_pred HHHHHH
Q ss_conf 111220
Q gi|254780605|r 151 PIDSLW 156 (609)
Q Consensus 151 lVD~iW 156 (609)
++.++.
T Consensus 170 ~l~~lR 175 (444)
T 3cb6_A 170 GLAKCL 175 (444)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999998