HHsearch results for GI: 254780605 and protein with PDBid: 3mx6_A
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=0 Score=340.00 Aligned_cols=231 Identities=16% Similarity=0.207 Sum_probs=195.0
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 56661999999879999844389999998753321001245301889999999875433027855554100001233543
Q gi|254780605|r 309 LLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAA 388 (609)
Q Consensus 309 ~lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~A 388 (609)
.|+.||++.||+.||+|...-..|+ .++.+.+..|+||.+++..++++..+.++. .......+|++|+++|+|++
T Consensus 4 ~m~~IKs~~EI~~mR~A~~i~~~~~----~~~~~~i~pG~te~el~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~ 78 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETL----DFITDHVKPNVTTNSLNDLCHNFITSHNAI-PAPLNYKGFPKSICTSINHV 78 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHH----HHHGGGCCTTCBHHHHHHHHHHHHHHTTCE-ETTTTGGGCCSSSEEEETTE
T ss_pred CCEEECCHHHHHHHHHHHHHHHHHH----HHHHHHCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCC
T ss_conf 7227789999999999999999999----999987769997999999999999986986-46766656764320567650
Q ss_pred CCCCCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 22224554332050389879983032010561222143210378888843336677888889972178978888999987
Q gi|254780605|r 389 IIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIA 468 (609)
Q Consensus 389 ipHY~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~a 468 (609)
.+|+.+ +++.+++||++++|.|+.|.+|++|+||||++|+|+++++++|+.|++++.++..+..| |+++.++|.++
T Consensus 79 ~~h~~~---~d~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~vg~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~~~dv~~a~ 154 (262)
T 3mx6_A 79 VCHGIP---NDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRP-GAKLGDIGYAI 154 (262)
T ss_dssp EECCCC---CSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCST-TCBHHHHHHHH
T ss_pred CCCCCC---CCCCCCCCCEEEEEEEEEECCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHH
T ss_conf 458989---98365899989998899999999221213664799989999999999999999997139-89999999999
Q ss_pred HHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCC----CCCCCEECCCCEEEECCCEEECC------------------C
Q ss_conf 3667741865-47764323211356077886237----78986005698788468603568------------------7
Q gi|254780605|r 469 RIFLWKYGAD-FAHGVGHGVGSFLPVHEGPQGIS----RTNQEPLLPGMILSNEPGYYRCG------------------A 525 (609)
Q Consensus 469 R~~l~~~g~d-y~HgtGHGVG~~l~VHE~P~~is----~~~~~~l~~Gmv~s~EPG~Y~~g------------------~ 525 (609)
|+++.++|++ +.|++||||| |++||.|. ++ +.++.+|++|||+|+|||+|.++ .
T Consensus 155 ~~~~~~~g~~~~~~~~GHgiG--l~~he~P~-i~~~~~~~~~~~L~~GmV~~iEp~~~~~~~~~~~~~~d~w~~~~~~g~ 231 (262)
T 3mx6_A 155 QSYAEKHNYSVVRDYTGHGIG--RVFHDKPS-ILNYGRNGTGLTLKEGMFFTVEPMINAGNYDTILSKLDGWTVTTRDKS 231 (262)
T ss_dssp HHHHHHTTCEECCSCCEEECS--SSSSEEEE-ECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEECTTTSCCEEETTCC
T ss_pred HHHHHHCCCCCCCCCCCCCCC--CCCCCCCC-CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEEECCC
T ss_conf 999998689428998628788--86068986-577776899978348978998634761777604533789668852687
Q ss_pred CCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCH
Q ss_conf 5215002599972787787766424221011653001
Q gi|254780605|r 526 FGIRIENVLCVSEPETINNGECLMLGFNTLTLCPIDR 562 (609)
Q Consensus 526 ~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~vP~~~ 562 (609)
+|+||||+|+||+. ++|.||..|-+.
T Consensus 232 ~g~riEd~v~VTe~-----------G~E~LT~~p~~L 257 (262)
T 3mx6_A 232 LSAQFEHTIGVTKD-----------GFEIFTLSPKKL 257 (262)
T ss_dssp CEEECBEEEEECSS-----------SEEESCCCTTCC
T ss_pred CEEEEEEEEEECCC-----------CCEECCCCCCCC
T ss_conf 48897309999699-----------377898997645