HHsearch results for GI: 254780605 and protein with PDBid: 3ooo_A
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae}
Probab=99.36 E-value=1.9e-11 Score=98.14 Aligned_cols=121 Identities=12% Similarity=0.124 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCHHHHHHCCCCCC-----EEEEEECCCCEEEECCHHHHHHHHHHC
Q ss_conf 999999999997499799960888747860667106100441467650-----077895783679978814899998619
Q gi|254780605|r 16 ERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTGSA-----GIAIVLRQKSVIFVDGRYTLQVEKEVD 90 (609)
Q Consensus 16 erL~~LR~~m~~~~idayiip~~D~h~sEyv~~~~~rl~~isGFtGSa-----G~aiIt~~~a~L~tDgRY~lQA~~el~ 90 (609)
.||++||+.|+++++||+||.+. .-+.|+|||+|+. +.+|...+++.|+||+||..||+++..
T Consensus 3 ~Rl~klr~~m~~~~ld~~lit~~------------~ni~YlTGf~~~~~er~~~l~i~~~~~~~li~~~~~~~~a~~~~~ 70 (132)
T 3ooo_A 3 SKLNRIRHHLHSVQAELAVFSDP------------VTVNYLTGFFCDPHERQMFLFVYEDRDPILFVPALEVSRAKQSVP 70 (132)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHHHHCS
T ss_pred HHHHHHHHHHHHCCCCEEEEECC------------CHHHHHCCCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHCCC
T ss_conf 39999999999869999999253------------132474086678764316778768997689724776888874579
Q ss_pred CCCEEEEECCCCCHHHHHHHHCCC--CCEEEECCEECCHHHHHHHHHHHHHCCCEEEECCCHHHHH
Q ss_conf 671799866899999988874379--9889965634139999999998533476199705001112
Q gi|254780605|r 91 TALFTIKNIAIEPLHAWISEHGFV--GLRLGLDSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDS 154 (609)
Q Consensus 91 ~~~~~~~~~~~~~~~~wl~~~~~~--g~~IG~Dp~l~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~ 154 (609)
..... .. ....+.+.+++.+.. ..+||+|...+|+..++.|++.+ +..++..+ ++|+.
T Consensus 71 ~~i~~-~~-d~~~~~~~l~~~l~~~~~~~igie~~~~t~~~~~~L~~~~---~~~~~d~~-~~i~~ 130 (132)
T 3ooo_A 71 FPVFG-YI-DSENPWQKIASNLPSFSVSKVLAEFDNLNVTKFQGLQTVF---DGHFENLT-PYIQN 130 (132)
T ss_dssp SCEEE-EC-TTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHHHC---CSEEEECC-HHHHT
T ss_pred CCEEE-EE-CCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHC---CCEEEEHH-HHHHH
T ss_conf 76899-80-4768789999999747997599911866999999998627---99597819-99998