Query gi|254780605|ref|YP_003065018.1| putative aminopeptidase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 609
No_of_seqs 267 out of 2609
Neff 7.1
Searched_HMMs 23785
Date Tue May 31 20:03:18 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780605.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ctz_A XAA-Pro aminopeptidase 100.0 0 0 1366.6 53.6 591 10-609 2-619 (623)
2 1wy2_A XAA-Pro dipeptidase; st 100.0 0 0 469.5 27.1 344 179-565 4-351 (351)
3 1kp0_A Creatine amidinohydrola 100.0 0 0 455.5 28.2 368 172-565 17-398 (402)
4 1chm_A Creatine amidinohydrola 100.0 0 0 446.5 30.0 365 173-563 17-396 (401)
5 1wn1_A Dipeptidase; prolidase, 100.0 0 0 449.3 26.2 346 182-565 2-354 (356)
6 2zsg_A Aminopeptidase P, putat 100.0 0 0 431.0 25.7 348 181-565 2-357 (359)
7 3biq_A FACT complex subunit SP 100.0 0 0 435.0 19.7 375 177-574 11-454 (467)
8 3l24_A XAA-Pro dipeptidase; PI 100.0 0 0 424.5 23.4 342 180-556 13-434 (517)
9 2iw2_A XAA-Pro dipeptidase; me 100.0 0 0 411.5 24.7 357 174-566 19-477 (494)
10 3cb6_A FACT complex subunit SP 100.0 0 0 420.2 16.1 363 177-566 11-438 (444)
11 2v3z_A XAA-Pro aminopeptidase; 100.0 0 0 404.6 26.0 356 175-570 4-435 (440)
12 3ig4_A XAA-Pro aminopeptidase; 100.0 0 0 374.9 26.5 352 178-569 5-412 (427)
13 3mx6_A Methionine aminopeptida 100.0 0 0 340.0 20.0 231 309-562 4-257 (262)
14 2gg2_A Methionine aminopeptida 100.0 2.9E-43 0 319.8 20.3 231 310-561 1-253 (263)
15 1o0x_A Methionine aminopeptida 100.0 3.2E-42 0 312.5 19.6 228 307-557 10-260 (262)
16 1qxy_A Methionyl aminopeptidas 100.0 2.1E-41 1.4E-45 306.9 16.0 228 312-561 2-252 (252)
17 3iu7_A Methionine aminopeptida 100.0 1.2E-39 5.2E-44 294.5 20.5 234 303-558 34-288 (288)
18 2b3h_A Methionine aminopeptida 100.0 3E-37 1.3E-41 277.9 19.1 224 312-557 74-318 (329)
19 2q8k_A Proliferation-associate 100.0 8.8E-29 3.7E-33 218.9 19.6 205 308-521 14-238 (401)
20 1xgs_A Methionine aminopeptida 100.0 4.2E-28 1.8E-32 214.2 17.4 201 318-538 2-207 (295)
21 2nw5_A Methionine aminopeptida 100.0 2.7E-27 1.2E-31 208.5 15.9 208 308-529 36-256 (360)
22 1b6a_A Methionine aminopeptida 99.9 1.9E-25 8.1E-30 195.6 16.7 206 310-529 157-375 (478)
23 3ovk_A Aminopeptidase P, XAA-P 99.7 3.9E-17 1.6E-21 137.8 11.4 124 14-155 8-131 (132)
24 3il0_A Aminopeptidase P; XAA-P 99.6 2.8E-15 1.2E-19 124.9 10.9 122 14-155 4-127 (131)
25 3o5v_A X-Pro dipeptidase; crea 99.4 7.2E-12 3E-16 101.1 11.7 122 15-154 2-130 (132)
26 3ooo_A Proline dipeptidase; st 99.4 1.9E-11 8.2E-16 98.1 13.4 121 16-154 3-130 (132)
27 3i7m_A XAA-Pro dipeptidase; st 99.2 7.6E-11 3.2E-15 94.0 10.2 113 16-140 4-124 (140)
28 3il0_A Aminopeptidase P; XAA-P 99.2 7.2E-11 3E-15 94.2 7.6 125 177-314 2-131 (131)
29 3ooo_A Proline dipeptidase; st 99.1 8.1E-11 3.4E-15 93.8 7.3 127 180-311 2-132 (132)
30 3o5v_A X-Pro dipeptidase; crea 99.1 1E-10 4.3E-15 93.1 6.8 127 180-311 2-132 (132)
31 3i7m_A XAA-Pro dipeptidase; st 99.1 1.5E-10 6.4E-15 91.9 7.4 130 179-312 2-139 (140)
32 2zsg_A Aminopeptidase P, putat 99.0 2.2E-09 9.2E-14 83.8 10.1 128 16-155 2-130 (359)
33 3ovk_A Aminopeptidase P, XAA-P 99.0 9.3E-10 3.9E-14 86.4 8.1 119 179-311 8-132 (132)
34 3ctz_A XAA-Pro aminopeptidase 98.8 2.1E-08 8.7E-13 77.0 8.7 125 176-310 3-154 (623)
35 1wy2_A XAA-Pro dipeptidase; st 98.6 7.9E-07 3.3E-11 66.0 11.5 119 15-155 5-124 (351)
36 1kp0_A Creatine amidinohydrola 98.4 5.7E-06 2.4E-10 60.1 11.0 129 12-155 22-154 (402)
37 1chm_A Creatine amidinohydrola 98.1 2.9E-05 1.2E-09 55.1 10.5 134 8-156 17-155 (401)
38 1wn1_A Dipeptidase; prolidase, 98.1 4E-06 1.7E-10 61.1 5.3 119 17-155 2-128 (356)
39 3biq_A FACT complex subunit SP 97.0 0.017 7.3E-07 35.8 12.1 141 13-156 12-175 (467)
40 3cb6_A FACT complex subunit SP 96.6 0.043 1.8E-06 33.0 11.2 142 13-156 12-175 (444)
41 3l24_A XAA-Pro dipeptidase; PI 94.4 0.13 5.3E-06 29.8 6.9 70 14-83 12-90 (517)
42 2b3h_A Methionine aminopeptida 93.5 0.38 1.6E-05 26.4 8.0 69 342-414 206-275 (329)
43 2v3z_A XAA-Pro aminopeptidase; 88.7 0.25 1E-05 27.7 2.9 64 13-80 7-81 (440)
44 3ig4_A XAA-Pro aminopeptidase; 87.5 0.21 8.9E-06 28.2 1.9 73 14-90 6-99 (427)
45 3kmh_A D-lyxose isomerase; cup 74.0 2.7 0.00011 20.5 3.6 33 500-532 168-205 (246)
46 1ynf_A Succinylarginine dihydr 59.5 5.4 0.00023 18.4 2.8 64 305-368 373-439 (458)
47 1gxq_A PHOB, phosphate regulon 45.2 13 0.00056 15.7 3.4 69 117-199 22-92 (106)
48 1agx_A Glutaminase-asparaginas 39.3 12 0.00051 16.0 1.9 54 177-243 65-119 (331)
49 2e5q_A PHD finger protein 19; 38.0 1.8 7.7E-05 21.7 -2.5 31 59-90 2-32 (63)
50 2k4j_A Putative transcriptiona 37.5 12 0.00051 16.0 1.7 68 116-197 31-100 (115)
51 2z9m_A Response regulator YYCF 37.3 15 0.00062 15.4 2.1 69 118-200 28-98 (120)
52 1dkg_D Molecular chaperone DNA 36.9 5 0.00021 18.7 -0.4 16 406-425 189-204 (383)
53 1opc_A OMPR, OMPRC; transcript 36.7 17 0.00071 15.0 2.3 71 117-201 22-94 (110)
54 2hwv_A DNA-binding response re 33.8 13 0.00054 15.8 1.3 13 183-195 88-100 (121)
55 1o7j_A L-asparaginase; atomic 33.1 16 0.00069 15.1 1.8 56 174-242 65-121 (327)
56 2v9y_A Phosphoribosylformylgly 32.2 11 0.00044 16.4 0.7 11 400-410 143-153 (334)
57 3i33_A Heat shock-related 70 k 31.1 12 0.00049 16.1 0.7 15 406-424 215-229 (404)
58 2oo3_A Protein involved in cat 30.1 20 0.00085 14.4 1.8 43 432-476 167-217 (283)
59 2jzy_A Transcriptional regulat 27.8 24 0.001 13.9 4.0 68 117-198 19-88 (112)
60 2v7y_A Chaperone protein DNAK; 27.8 16 0.00069 15.1 1.0 40 165-208 111-151 (509)
61 1td9_A Phosphate acetyltransfe 26.2 26 0.0011 13.7 1.9 11 190-200 119-129 (329)
62 2d6f_A Glutamyl-tRNA(Gln) amid 25.6 23 0.00098 14.0 1.5 60 170-243 144-204 (435)
63 2zsh_B Della protein GAI; plan 25.3 24 0.001 13.9 1.6 38 349-396 38-76 (110)
64 3kiz_A Phosphoribosylformylgly 25.1 26 0.0011 13.7 1.6 10 478-487 285-294 (394)
65 4pga_A Glutaminase-asparaginas 24.9 27 0.0012 13.5 1.8 57 174-243 70-127 (337)
66 1wsa_A Asparaginase, asparagin 23.5 25 0.0011 13.8 1.3 54 177-243 66-120 (330)
67 1tf4_A T. fusca endo/EXO-cellu 23.3 29 0.0012 13.3 3.1 25 369-395 355-380 (605)
68 2krx_A ASL3597 protein; struct 23.1 21 0.00088 14.3 0.9 17 516-533 71-87 (94)
69 2hqn_A Putative transcriptiona 22.2 31 0.0013 13.1 3.3 71 117-201 20-92 (109)
70 2wlt_A L-asparaginase; hydrola 21.3 32 0.0013 13.0 1.8 58 173-243 64-122 (332)
71 3mw8_A Uroporphyrinogen-III sy 20.8 33 0.0014 13.0 5.4 36 21-59 16-51 (240)
72 2fsj_A Hypothetical protein TA 20.7 33 0.0014 12.9 1.6 20 402-425 187-206 (346)
No 1
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=0 Score=1366.58 Aligned_cols=591 Identities=36% Similarity=0.579 Sum_probs=545.0
Q ss_pred CCCCHHHHHHHHHHHHHH-----CCCCEEEEECCCCCCCCCCCCHHCHHHHHHCCCCCCEEEEEECCCCEEEECCHHHHH
Q ss_conf 887558999999999997-----499799960888747860667106100441467650077895783679978814899
Q gi|254780605|r 10 SPSKTFERVHNLRSCFDS-----LGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTGSAGIAIVLRQKSVIFVDGRYTLQ 84 (609)
Q Consensus 10 ~~~~~~erL~~LR~~m~~-----~~idayiip~~D~h~sEyv~~~~~rl~~isGFtGSaG~aiIt~~~a~L~tDgRY~lQ 84 (609)
+|..|+|||++||++|++ +||||||||++|+|||||+|++|+||+||||||||||+||||+++|+||||||||+|
T Consensus 2 ~~~~~~~~l~~lr~~m~~~~~~~~~id~yivp~~D~h~sEy~~~~~~r~~~lsgFtGSaG~avit~~~a~l~tDgRY~~Q 81 (623)
T 3ctz_A 2 PPKVTSELLRQLRQAMRNSEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGRYFLQ 81 (623)
T ss_dssp -CBCCHHHHHHHHHHTTCTTTCSSCCSEEEECSCCTTCCSSCCGGGCHHHHHHSCCSSCCEEEEESSCEEEEECGGGHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHCCCHHCCCCCCHHHHHHHHCCEEEEEECCHHHHH
T ss_conf 98618999999999987346666780599968988877804740203041401998465517632887599988619999
Q ss_pred HHHHHCCCCEEEEEC---CCCCHHHHHHHHCCCCCEEEECCEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCC
Q ss_conf 998619671799866---89999998887437998899656341399999999985334761997050011122012763
Q gi|254780605|r 85 VEKEVDTALFTIKNI---AIEPLHAWISEHGFVGLRLGLDSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDSLWKDRPQ 161 (609)
Q Consensus 85 A~~el~~~~~~~~~~---~~~~~~~wl~~~~~~g~~IG~Dp~l~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~iW~~rP~ 161 (609)
|++|+|++| .+++. +.+++.+||.+++++|.+|||||+++|++++++|++.++++++.|++++.||||+||+|||.
T Consensus 82 A~~q~~~~~-~l~~~~~~~~~~~~~wl~~~~~~~~~ig~Dp~l~s~~~~~~l~~~~~~~~~~l~~~~~nliD~iW~~rP~ 160 (623)
T 3ctz_A 82 AAKQMDSNW-TLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHLIPVKENLVDKIWTDRPE 160 (623)
T ss_dssp HHHHBCTTE-EEEETTSTTCCCHHHHHHHHCCTTCEEEECGGGSBHHHHHHHHHHHHHTTCEEEECSSCHHHHHCTTCCC
T ss_pred HHHHCCCCE-EEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCC
T ss_conf 999619980-9996488899899999998646899899888537899999999999877987997441177887630863
Q ss_pred CCCCEEEECCHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCC
Q ss_conf 32200012012335877388999999860233430676028420234432013553778700233220147862000353
Q gi|254780605|r 162 RLYRKVAMQDMAYAGRESQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDK 241 (609)
Q Consensus 162 ~~~~~i~~~~~~~aG~s~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~ 241 (609)
.|.+++|.||.+|+|+|+++||++||+.|+++++|+++||+|||||||||+||+|++|+|+|+||++|+.+ .+.||++.
T Consensus 161 ~~~~~i~~~~~~~~G~s~~~Kl~rlr~~L~~~~~Dallit~~dnIawLlNiRg~di~~~Pv~~s~~iI~~~-~~~lf~~~ 239 (623)
T 3ctz_A 161 RPCKPLLTLGLDYTGISWKDKVADLRLKMAERNVMWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLE-TIMLFIDG 239 (623)
T ss_dssp CCCCCCEECCHHHHSSCHHHHHHHHHHHHHTTTEEEEEECCHHHHHHHHTEECCSSSSSCCCSCEEEEESS-CEEEECCS
T ss_pred CCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEEEECCCC-CCEEEECC
T ss_conf 23432441781014863999999999999876998899934643200245522787877440124330455-41564034
Q ss_pred CCCCHHH-HHHH--------CCCCEEECHHHHHHHHHHCCC---CCCEEEECCCCCCHHHHHHHHHCCCEEECCCCCCHH
Q ss_conf 1121567-8741--------256357074451577863013---574289725317788975312139567515432115
Q gi|254780605|r 242 QYINEQL-KALL--------SAVAIVLDMDMMDSRLVCLAR---TSMPILIDPKWISYRFFKVIAQKNGVMVEGSDPSCL 309 (609)
Q Consensus 242 ~k~~~~~-~~~l--------~~~~~~~~~~~~~~~l~~l~~---~~~~i~id~~~~s~~~~~~l~~~~~~~i~~~~pI~~ 309 (609)
.++.... +.++ .....+.+++.+...+..+.. ...+++++ ..+++++++.+.. +..++...+||..
T Consensus 240 ~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~i~~~-~~~s~~~~~~l~~-~~~ii~~~~pI~~ 317 (623)
T 3ctz_A 240 DRIDAPSVKEHLLLDLGLEAEYRIQVHPYKSILSELKALCADLSPREKVWVS-DKASYAVSETIPK-DHRCCMPYTPICI 317 (623)
T ss_dssp GGGGSHHHHHHTTTTSCCCGGGCEEEECGGGHHHHHHHHHHTCCTTCEEEEE-TTSBHHHHHHSCG-GGEEEESSCHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCEEEEC-CCCHHHHHHHHHC-CCEEEECCCHHHH
T ss_conf 2016777665442101223223233055899999999876521665405415-6223999998631-6717715897899
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 666199999987999984438999999875332100-1245301889999999875433027855554100001233543
Q gi|254780605|r 310 LRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSL-ETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAA 388 (609)
Q Consensus 310 lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~-~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~A 388 (609)
||+|||++||++||+||++||+|+++|++||+.... ..++|.+++.+++.+|++ ++++.++||+||+++|+|||
T Consensus 318 lRaIKn~~EI~~mR~A~~~d~~Al~~~l~~L~~~~~~~~i~e~~~~~~l~~~r~~-----~~~~~~~Sf~tI~asG~n~A 392 (623)
T 3ctz_A 318 AKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQ-----QADFVDLSFPTISSTGPTGA 392 (623)
T ss_dssp HHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCBHHHHHHHHHHHHHT-----STTEEEESSCCEEEEGGGGG
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-----CCCCCCCCCCCCCCCCCCCC
T ss_conf 7744998999999999998889999888887503630568988899999998863-----27754543222235577655
Q ss_pred CCCCCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 22224554332050389879983032010561222143210378888843336677888889972178978888999987
Q gi|254780605|r 389 IIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIA 468 (609)
Q Consensus 389 ipHY~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~a 468 (609)
+|||+|+..+++++++|+++|+|+||||.+|||||||||++|+|+++||++||+||+||++++.++||+|++|.++|++|
T Consensus 393 ~~Hy~~~~~~~~~i~~gd~~liD~G~~y~gy~tDiTRT~~~G~pt~e~k~~y~~vl~~~~~~~~a~~p~g~~g~~~d~~a 472 (623)
T 3ctz_A 393 IIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFA 472 (623)
T ss_dssp CTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHHHHHHHTCCEETTCBGGGGGGGG
T ss_pred CCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 34532110222100168850565546974503662687447889999998899999999999998579998048999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCEECCCCEEEECCCEEECCCCCEEEEEEEEEEECCCC-CCC
Q ss_conf 366774186547764323211356077886237--78986005698788468603568752150025999727877-877
Q gi|254780605|r 469 RIFLWKYGADFAHGVGHGVGSFLPVHEGPQGIS--RTNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSEPETI-NNG 545 (609)
Q Consensus 469 R~~l~~~g~dy~HgtGHGVG~~l~VHE~P~~is--~~~~~~l~~Gmv~s~EPG~Y~~g~~GiRIEn~v~v~~~~~~-~~~ 545 (609)
|.+||++|+||.||||||||+||+|||+|++|+ ..++.+|+||||+|||||||+||+|||||||+|+||+.++. +++
T Consensus 473 r~~l~~~G~~~~hgtGHGvG~~l~VHE~P~~i~~~~~~~~~Le~GMv~siEPG~Y~~g~~GiRiEn~v~Vte~~~~~~~~ 552 (623)
T 3ctz_A 473 RSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFN 552 (623)
T ss_dssp THHHHHTTCCCSSCSEEBCCSSSCSSCCSCEECTTCSCSCBCCTTCEEEECCEEEETTTEEEECBEEEEEEEECCSSCCS
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCEEEECCCEEEEEEEEEEEEECCCCCCCC
T ss_conf 99999809997889986589999888898646657999977489999988998898895899702189999789756678
Q ss_pred CCCEEEEEECCCCCCCHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHCCCC
Q ss_conf 66424221011653001107867789999999999999999997441180---79999999732579
Q gi|254780605|r 546 ECLMLGFNTLTLCPIDRKLILVELLTNEEKKWCNDYHRRVYTSLAPLIED---QEVLSWLFSVTAPI 609 (609)
Q Consensus 546 ~~~fl~Fe~lT~vP~~~~li~~~ll~~~e~~wln~Yh~~v~~~~~p~l~~---~~~~~wl~~~t~~i 609 (609)
+..||+||+||+||||++|||++|||++||+|||+||++|+++|+|+|++ .++++||+++|+||
T Consensus 553 ~~~fl~fe~lT~~P~~~~li~~~ll~~~e~~wln~yh~~v~~~~~~~l~~~~~~~~~~wl~~~t~~i 619 (623)
T 3ctz_A 553 NRGSLTLEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEALEWLIRETQPI 619 (623)
T ss_dssp SSCEEEEEECCCCCCCGGGSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCCC
T ss_pred CCCCCCCCEEEECCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC
T ss_conf 8763355522278662754484549999999999999999999888648232278999999827213
No 2
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/proteomics initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii OT3} PDB: 1pv9_A
Probab=100.00 E-value=0 Score=469.47 Aligned_cols=344 Identities=28% Similarity=0.393 Sum_probs=283.8
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCCCEE
Q ss_conf 38899999986023343067602842023443201355377870023322014786200035311215678741256357
Q gi|254780605|r 179 SQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKALLSAVAIV 258 (609)
Q Consensus 179 ~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~k~~~~~~~~l~~~~~~ 258 (609)
..+|++|+|+.|+++++|++++++++||+|||| |+|++.++++++.+ +..||++...... +... ....+
T Consensus 4 ~~~Rl~rl~~~m~~~~lDalll~~~~ni~YltG-------~~~~~~~~l~i~~~-~~~l~~~~~~~~~-~~~~--~~~~~ 72 (351)
T 1wy2_A 4 MNEKVKKIIEFMDKNSIDAVLIAKNPNVYYISG-------ASPLAGGYILITGE-SATLYVPELEYEM-AKEE--SNIPV 72 (351)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEECSHHHHHHHHS-------CCCSSCCEEEEETT-EEEEEEEHHHHHH-HHHH--CSSCE
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCHHHEECCC-------CCCCCCEEEEEECC-CCEEEECCCCHHH-HHHH--CCCCE
T ss_conf 999999999999888999999788265141239-------49978989999899-6789987730789-9876--29976
Q ss_pred ECHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 07445157786301357428972531778897531213--9567515432115666199999987999984438999999
Q gi|254780605|r 259 LDMDMMDSRLVCLARTSMPILIDPKWISYRFFKVIAQK--NGVMVEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYF 336 (609)
Q Consensus 259 ~~~~~~~~~l~~l~~~~~~i~id~~~~s~~~~~~l~~~--~~~~i~~~~pI~~lRaiKn~~EI~~mr~Ahi~DgvAl~kf 336 (609)
.++....+....+. ..++++++. .+++..++.+... ...++...+++..+|++||+.||+.||+|......|+.+.
T Consensus 73 ~~~~~~~~~~~~l~-~~k~igie~-~~~~~~~~~l~~~~~~~~~vd~~~~i~~lR~iKs~~EI~~~r~a~~i~~~~~~~~ 150 (351)
T 1wy2_A 73 EKFKKMDEFYKALE-GIKSLGIES-SLPYGFIEELKKKANIKEFKKVDDVIRDMRIIKSEKEIKIIEKACEIADKAVMAA 150 (351)
T ss_dssp EEESSHHHHHHHHT-TCSEEEECT-TCBHHHHHHHHHHSCCCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHHHHC-CCCEEEECC-CCCHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98630024677743-676598737-8879999999852788638884899999882199999999999998888988877
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCE
Q ss_conf 87533210012453018899999998754330278555541000012335432222455433205038987998303201
Q gi|254780605|r 337 LFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQY 416 (609)
Q Consensus 337 l~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipHY~~~~~s~~~i~~~~~~LiDsG~qY 416 (609)
+. ...+|+||.+++..+.....+ .+....+|++|+++|+|++.+||.+ +++++++|+++++|+|++|
T Consensus 151 ~~----~i~~G~te~ei~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~gd~v~id~g~~~ 217 (351)
T 1wy2_A 151 IE----EITEGKKEREVAAKVEYLMKM------NGAEKPAFDTIIASGYRSALPHGVA---SDKRIERGDLVVIDLGALY 217 (351)
T ss_dssp HH----HCCTTCBHHHHHHHHHHHHHH------TTCSEESSCCEEEEGGGGGSTTCBC---CSCBCCTTCEEEEEECEEE
T ss_pred HH----HCCCCCEEEHHHHHHHHHHHC------CCCCCCCCCCEEECCCCCCCCCCCC---CCCCCCCCCEEEEEECCCC
T ss_conf 76----415783431133333344420------5763125784030467754532346---6540238998999956735
Q ss_pred ECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCC
Q ss_conf 05612221432103788888433366778888899721789788889999873667741865--4776432321135607
Q gi|254780605|r 417 VNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGAD--FAHGVGHGVGSFLPVH 494 (609)
Q Consensus 417 ~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~d--y~HgtGHGVG~~l~VH 494 (609)
.+|+||+|||+++|+|+++|+++|+.|++++.++..+.+| |+++.+++.++|+++++.|++ |.|++||||| |++|
T Consensus 218 ~gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~~~~~~~~~GHgiG--l~~~ 294 (351)
T 1wy2_A 218 QHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKP-GITAKELDSIARNIIAEYGYGEYFNHSLGHGVG--LEVH 294 (351)
T ss_dssp TTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSS
T ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCC--CCCC
T ss_conf 8863563458990899999999999999999999997689-988999999999999984998537886141128--8878
Q ss_pred CCCCCCCCCCCCEECCCCEEEECCCEEECCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCHHCC
Q ss_conf 78862377898600569878846860356875215002599972787787766424221011653001107
Q gi|254780605|r 495 EGPQGISRTNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSEPETINNGECLMLGFNTLTLCPIDRKLI 565 (609)
Q Consensus 495 E~P~~is~~~~~~l~~Gmv~s~EPG~Y~~g~~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~vP~~~~li 565 (609)
|.| .+++.++.+|+||||+|+|||+|.||.+||||||.|+||+. ++|.||-.| ++||
T Consensus 295 E~p-~i~~~~~~~l~~gmv~~iEp~~~~~~~~g~riEd~v~Vt~~-----------G~e~Lt~~p--~~li 351 (351)
T 1wy2_A 295 EWP-RVSQYDETVLREGMVITIEPGIYIPKIGGVRIEDTILITKN-----------GSKRLTKTE--RELI 351 (351)
T ss_dssp EEE-EESTTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEETT-----------EEEESCCSC--SCCC
T ss_pred CCC-CCCCCCCCEECCCCEEEECCEEEECCCCEEEEEEEEEECCC-----------CCEECCCCC--CCCC
T ss_conf 798-56889997658998899999779799898998779999799-----------257899998--1209
No 3
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=0 Score=455.51 Aligned_cols=368 Identities=14% Similarity=0.101 Sum_probs=289.7
Q ss_pred HHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHH
Q ss_conf 23358773889999998602334306760284202344320135537787002332201478620003531121567874
Q gi|254780605|r 172 MAYAGRESQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKAL 251 (609)
Q Consensus 172 ~~~aG~s~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~k~~~~~~~~ 251 (609)
..|+.+.+++|++|+|+.|+++++|+++|++++||+||+|++ +.|....+++|...++..+++............
T Consensus 17 ~pfs~~E~~~R~~rl~~~m~~~~lDalvi~~~~ni~YlTG~~-----~~~~~~~~~~v~~~~~~~~i~~~~~~~~~~~~~ 91 (402)
T 1kp0_A 17 TPFSZAEMTRRZBRLRAWMAKSBIDAVLFTSYHNINYYSGWL-----YCYFGRKYAZVIBZVKAVTISKGIDGGMPWRRS 91 (402)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCC-----CCCTTCCCEEEECSSCEEEEEEGGGTTHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCC-----CCCCCCCEEEEECCCCEEEEECCHHHHHHHHHC
T ss_conf 995999999999999999998799999879840137102997-----766665069996599339997530056677632
Q ss_pred HCCCCEEEC--HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CCEEECCCCCCHHHHHCCCHHHHHHHHHHHH
Q ss_conf 125635707--445157786301357428972531778897531213--9567515432115666199999987999984
Q gi|254780605|r 252 LSAVAIVLD--MDMMDSRLVCLARTSMPILIDPKWISYRFFKVIAQK--NGVMVEGSDPSCLLRATKNKVEIEGMQTAHI 327 (609)
Q Consensus 252 l~~~~~~~~--~~~~~~~l~~l~~~~~~i~id~~~~s~~~~~~l~~~--~~~~i~~~~pI~~lRaiKn~~EI~~mr~Ahi 327 (609)
........+ .+.+...+........++.++...++......+.+. +..++...+++..+|+|||+.||+.||+|..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vd~~~~i~~~R~iKs~~Ei~~lr~A~~ 171 (402)
T 1kp0_A 92 FGBNIVYTDWKRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRRZLZKALPGTEFVDVGZPVMWZRVIKSSEEZBLIRZGAR 171 (402)
T ss_dssp SSEEEEECSSSTTHHHHHHHHHHTTCSEEEECTTTCBHHHHHHHHHHSTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred CCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 58726972666304999999874203312210003469999999975899867635368999864599999999999789
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCE
Q ss_conf 43899999987533210012453018899999998754330278555541000012335432222455433205038987
Q gi|254780605|r 328 QDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDEL 407 (609)
Q Consensus 328 ~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipHY~~~~~s~~~i~~~~~ 407 (609)
....|+ .++.+....|+||.+++..+.....+.+..........++.+++.+|+|++.+|+.| +++++++|++
T Consensus 172 i~~~a~----~~~~~~~~~G~tE~ev~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~h~~~---~~~~i~~Gd~ 244 (402)
T 1kp0_A 172 ISDIGG----AATAAAISAGVPEYEVAIATTBAMVRZIARBFPYVELMDTWIWFQSGINTDGAHNPV---TBRVVZRGDI 244 (402)
T ss_dssp HHHHHH----HHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEEEEGGGGGSTTCCE---ECCBCCTTCE
T ss_pred HHHHHH----HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCC---CCEEECCCCE
T ss_conf 999999----999998406884779999999999985465788654347653110366656554688---7315418837
Q ss_pred EEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC--CCCCCCC
Q ss_conf 99830320105612221432103788888433366778888899721789788889999873667741865--4776432
Q gi|254780605|r 408 LLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGAD--FAHGVGH 485 (609)
Q Consensus 408 ~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~d--y~HgtGH 485 (609)
+++|+|++|.+|+||+||||++|+|+++++++|+.|++++.++..+..| |+++.+++..+|+++.+.|+. |.|||||
T Consensus 245 v~iD~g~~~~Gy~aD~tRt~~~g~~~~~~~~~~~~~~~~~~a~~~~~kp-G~~~~~v~~~~~~~~~~~g~~~~~~~~~GH 323 (402)
T 1kp0_A 245 LSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLIKP-GARCKDIASELNBMYRZWDLLRYRTFGYGH 323 (402)
T ss_dssp EEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCGGGBCSCSCB
T ss_pred EEEECCCCEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 9983564056763130010013772188999999999999999997269-987999999999999970867426887655
Q ss_pred CCCCCCCCCCCCC----CCCCCCCCEECCCCEEEECCCEE----ECCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCC
Q ss_conf 3211356077886----23778986005698788468603----568752150025999727877877664242210116
Q gi|254780605|r 486 GVGSFLPVHEGPQ----GISRTNQEPLLPGMILSNEPGYY----RCGAFGIRIENVLCVSEPETINNGECLMLGFNTLTL 557 (609)
Q Consensus 486 GVG~~l~VHE~P~----~is~~~~~~l~~Gmv~s~EPG~Y----~~g~~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~ 557 (609)
||| |.+||.|. .+.+.++.+|+||||||+|||+| .+|.|||||||+|+||+. ++|.||-
T Consensus 324 giG--l~~h~~~~~~~~~~~~~~~~~Le~GMv~~iEPg~y~~~~~~g~gGvriEd~v~Vt~~-----------G~e~LT~ 390 (402)
T 1kp0_A 324 SFG--VLBHYYGREAGVELREDIZTVLEPGMVVSMEPMVMBPEGEPGAGGYREHDILVIKEN-----------BTENITG 390 (402)
T ss_dssp BCE--EEETTEECCTTCBCCTTCCCBCCTTCEEEECCEEEECTTSTTCEEEECBEEEEEETT-----------EEEECCC
T ss_pred CCC--CCCCCCCCCCCCCCCCCCCCEECCCCEEEECCEEECCCCCCCEEEEEEEEEEEECCC-----------CCEECCC
T ss_conf 058--778888767887005999978489978999397205876688039999889999699-----------2579989
Q ss_pred CCCCHHCC
Q ss_conf 53001107
Q gi|254780605|r 558 CPIDRKLI 565 (609)
Q Consensus 558 vP~~~~li 565 (609)
.|++.+.+
T Consensus 391 ~P~~~~~~ 398 (402)
T 1kp0_A 391 FPFGPEHN 398 (402)
T ss_dssp SCCSTTTC
T ss_pred CCCCHHHC
T ss_conf 99987881
No 4
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=0 Score=446.49 Aligned_cols=365 Identities=15% Similarity=0.124 Sum_probs=289.1
Q ss_pred HHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHH
Q ss_conf 33587738899999986023343067602842023443201355377870023322014786200035311215678741
Q gi|254780605|r 173 AYAGRESQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKALL 252 (609)
Q Consensus 173 ~~aG~s~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~k~~~~~~~~l 252 (609)
.|+.+.+++|++++|+.|+++++|+++|++++||+||+++.+ .|....+++|..+++..+++.............
T Consensus 17 ~fs~~E~~~R~~rl~~~m~~~~lDalvi~~~~ni~ylTG~~~-----~~~~~~~~lv~~~~~~~~i~~~~~~~~~~~~~~ 91 (401)
T 1chm_A 17 TFSAQEYANRQARLRAHLAAENIDAAIFTSYHNINYYSDFLY-----CSFGRPYALVVTEDDVISISANIDGGQPWRRTV 91 (401)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCC-----CCTTCCCEEEECSSCEEEEEEGGGTTHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCC-----CCCCCEEEEEEECCCEEEEEECCCHHHHHHHCC
T ss_conf 979999999999999999987998999899855154149898-----888860899992897299994532367887502
Q ss_pred CCCCE-EECH--HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH--CCCEEECCCCCCHHHHHCCCHHHHHHHHHHHH
Q ss_conf 25635-7074--4515778630135742897253177889753121--39567515432115666199999987999984
Q gi|254780605|r 253 SAVAI-VLDM--DMMDSRLVCLARTSMPILIDPKWISYRFFKVIAQ--KNGVMVEGSDPSCLLRATKNKVEIEGMQTAHI 327 (609)
Q Consensus 253 ~~~~~-~~~~--~~~~~~l~~l~~~~~~i~id~~~~s~~~~~~l~~--~~~~~i~~~~pI~~lRaiKn~~EI~~mr~Ahi 327 (609)
..... ..+. ................+.++....+...+..+.. .+..++...+++..+|+|||+.||+.||+|..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~~R~iKs~~EI~~mr~A~~ 171 (401)
T 1chm_A 92 GTDNIVYTDWQRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAARYPDAELVDVAAACMRMRMIKSAEEHVMIRHGAR 171 (401)
T ss_dssp SSEEEEECTTSTTHHHHHHHHHCSCCSEEEECTTTCBHHHHHHHHHHCTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 66327852676423999998740123433333343449999998730899678516679999881199999999999899
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCE
Q ss_conf 43899999987533210012453018899999998754330278555541000012335432222455433205038987
Q gi|254780605|r 328 QDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDEL 407 (609)
Q Consensus 328 ~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipHY~~~~~s~~~i~~~~~ 407 (609)
....|+...+ +.+..|+||.+++..+.....+.+.....+....||.+|+++|+|++.+||.+ +++++++|++
T Consensus 172 i~~~a~~~~~----~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~h~~~---~~~~i~~Gd~ 244 (401)
T 1chm_A 172 IADIGGAAVV----EALGDQVPEYEVALHATQAMVRAIADTFEDVELMDTWTWFQSGINTDGAHNPV---TTRKVNKGDI 244 (401)
T ss_dssp HHHHHHHHHH----HHCCTTCBHHHHHHHHHHHHHHHHHHHCSSCCBCCCEEEEEEGGGGGSTTCCE---ESCBCCTTCE
T ss_pred HHHHHHHHHH----HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCE
T ss_conf 9999999999----99871897899999999999884212334334456554135667754554442---2244669988
Q ss_pred EEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC--CCCCCCCC
Q ss_conf 9983032010561222143210378888843336677888889972178978888999987366774186--54776432
Q gi|254780605|r 408 LLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGA--DFAHGVGH 485 (609)
Q Consensus 408 ~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~--dy~HgtGH 485 (609)
+++|+|++|.+|++|+||||++|+|+++++++|+.|++++.+...+..| |+++.+++..++..+++.|+ .+.||+||
T Consensus 245 v~id~g~~~~GY~~d~tRt~~vG~~~~~~~~~~~~~~~~~~~~~~~~rp-G~~~~~i~~~~~~~~~~~g~~~~~~~~~Gh 323 (401)
T 1chm_A 245 LSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKP-GARCSDIARELNEIFLKHDVLQYRTFGYGH 323 (401)
T ss_dssp EEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTCGGGBCSCSCB
T ss_pred EEEECCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 9995030687640463257860334443202357899999999985688-846405999999999976996115777566
Q ss_pred CCCCCCCCCCCCC----CCCCCCCCEECCCCEEEECCCEEE----CCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCC
Q ss_conf 3211356077886----237789860056987884686035----68752150025999727877877664242210116
Q gi|254780605|r 486 GVGSFLPVHEGPQ----GISRTNQEPLLPGMILSNEPGYYR----CGAFGIRIENVLCVSEPETINNGECLMLGFNTLTL 557 (609)
Q Consensus 486 GVG~~l~VHE~P~----~is~~~~~~l~~Gmv~s~EPG~Y~----~g~~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~ 557 (609)
|+| +.+||.|. .+...++.+|+||||||+|||+|. ||.|||||||+|+||+. ++|+||-
T Consensus 324 giG--~~~~~~~~~~~~~~~~~~~~~L~~GMv~siEp~iy~~~~~~g~~gvr~Ed~v~Vt~~-----------G~e~LT~ 390 (401)
T 1chm_A 324 SFG--TLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGLPGAGGYREHDILIVNEN-----------GAENITK 390 (401)
T ss_dssp BCS--BEETTEECCTTSBCCTTCCCBCCTTCEEEECCEEEECTTSTTCEEEECBEEEEEETT-----------EEEECCC
T ss_pred CCC--CCCCCCCCCCCCEECCCCCCEECCCCEEEECCEEECCCCCCCEEEEEEEEEEEECCC-----------CCEECCC
T ss_conf 478--778888766887024899988889978998898674677675128999889999899-----------1678889
Q ss_pred CCCCHH
Q ss_conf 530011
Q gi|254780605|r 558 CPIDRK 563 (609)
Q Consensus 558 vP~~~~ 563 (609)
+|++.+
T Consensus 391 ~P~~~~ 396 (401)
T 1chm_A 391 FPYGPE 396 (401)
T ss_dssp SCCSHH
T ss_pred CCCCHH
T ss_conf 999835
No 5
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii OT3} PDB: 2how_A
Probab=100.00 E-value=0 Score=449.27 Aligned_cols=346 Identities=27% Similarity=0.330 Sum_probs=281.6
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCCCEE---
Q ss_conf 99999986023343067602842023443201355377870023322014786200035311215678741256357---
Q gi|254780605|r 182 KIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKALLSAVAIV--- 258 (609)
Q Consensus 182 Ki~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~k~~~~~~~~l~~~~~~--- 258 (609)
|++++|+.|+++++|+++|++++||.||||+++.+....| ++++|..++++.|++.... ....+. ... ..+
T Consensus 2 Rl~rl~~~m~~~~ldalvi~~~~ni~YltG~~~~~~~~~~---~~lvv~~~g~~~li~~~~~-~~~~~~-~~~-~~~~~~ 75 (356)
T 1wn1_A 2 RLEKFIHLLGERGFDGALISPGTNLYYLTGLRLHEVGERL---AILAVSAEGDYRFLAPSLY-ENVVNN-FPA-TFWHDG 75 (356)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCSCCTTSC---CEEEEETTSCEEEEEEGGG-TTTTTT-SCE-EEECTT
T ss_pred HHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCCE---EEEEEECCCCEEEEECHHH-HHHHHC-CCE-EEEEEC
T ss_conf 7999999999879999997793335587299568888851---9999958998899978777-877632-880-589725
Q ss_pred -ECHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -0744515778630135742897253177889753121-39567515432115666199999987999984438999999
Q gi|254780605|r 259 -LDMDMMDSRLVCLARTSMPILIDPKWISYRFFKVIAQ-KNGVMVEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYF 336 (609)
Q Consensus 259 -~~~~~~~~~l~~l~~~~~~i~id~~~~s~~~~~~l~~-~~~~~i~~~~pI~~lRaiKn~~EI~~mr~Ahi~DgvAl~kf 336 (609)
.+++.+...+..+.....++++|...... ....+.. .+..++...+++..+|+||++.||+.||+|......|+.++
T Consensus 76 ~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~-~~~~~~~l~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~ 154 (356)
T 1wn1_A 76 ENPYAKLREILEELGISKGRILIEDTMRAD-WLIGIMKLGKFTFQPLSSLIKELRMIKDKEEVKMMEHASRIADKVFEEI 154 (356)
T ss_dssp SCHHHHHHHHHHHTTCSSEEEEECTTSBHH-HHHHHGGGSCEEEEETHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCEEEEEECCHHH-HHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 788999999999838667628986120699-9999986689879986799999997399999999999999899999999
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCE
Q ss_conf 87533210012453018899999998754330278555541000012335432222455433205038987998303201
Q gi|254780605|r 337 LFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQY 416 (609)
Q Consensus 337 l~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipHY~~~~~s~~~i~~~~~~LiDsG~qY 416 (609)
+. ....|+||.+++..++.+.+..+ .+.+|++|+++|+|++.+||.| +++++++||++++|+|++|
T Consensus 155 ~~----~i~~G~tE~ei~~~~~~~~~~~~-------~~~~~~~i~~~g~~~~~~h~~~---~~r~~~~Gd~v~id~g~~~ 220 (356)
T 1wn1_A 155 LT----WDLIGMKERELALKIELLIRELS-------DGIAFEPIVASGENAANPHHEP---GERKIRKGDIIILDYGARW 220 (356)
T ss_dssp TT----SCCTTCBHHHHHHHHHHHHHHHS-------SEESSCCEEEEGGGGGCTTCCC---CSCBCCTTCEEEEEECEEE
T ss_pred HH----HHHCCCCHHHHHHHHHHHHHHCC-------CCCCCCCCCCCCCCCCCCEECC---CCCCCCCCCEEEEEEEECC
T ss_conf 99----97639969999888987654033-------3345675114678631000014---3553337975799874012
Q ss_pred ECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCC
Q ss_conf 05612221432103788888433366778888899721789788889999873667741865--4776432321135607
Q gi|254780605|r 417 VNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGAD--FAHGVGHGVGSFLPVH 494 (609)
Q Consensus 417 ~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~d--y~HgtGHGVG~~l~VH 494 (609)
.+|++|+|||+++|+|+++|++.|..+++++.+...+. ++|+++.+++.++|+++++.|++ +.|++||||| +++|
T Consensus 221 ~gY~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~-kpG~~~~~v~~~~~~~~~~~g~~~~~~~~~GHgiG--~~~~ 297 (356)
T 1wn1_A 221 KGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAV-REGIKAKDVDSRAREVISKAGYGEYFIHRTGHGLG--LDVH 297 (356)
T ss_dssp TTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHC-BTTSBHHHHHHHHHHHHHTTTCGGGCCSCSEEECS--SSSS
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECC--CCCC
T ss_conf 33246766320268863888999999999999999867-89989999899887788872677667787377515--8757
Q ss_pred CCCCCCCCCCCCEECCCCEEEECCCEEECCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCHHCC
Q ss_conf 78862377898600569878846860356875215002599972787787766424221011653001107
Q gi|254780605|r 495 EGPQGISRTNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSEPETINNGECLMLGFNTLTLCPIDRKLI 565 (609)
Q Consensus 495 E~P~~is~~~~~~l~~Gmv~s~EPG~Y~~g~~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~vP~~~~li 565 (609)
|.| .|++.++.+|+|||||++|||+|.||.+|+||||.++||+. +.|.||-.| ++|+
T Consensus 298 e~p-~i~~~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~~~Vt~~-----------G~e~Lt~~p--~~l~ 354 (356)
T 1wn1_A 298 EEP-YIGPDGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEG-----------KGRRLTKAE--RELI 354 (356)
T ss_dssp EEE-EESTTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEETT-----------EEEESCCCC--CSCC
T ss_pred CCC-CCCCCCCCEECCCCEEEECCEEEECCCCEEEECCEEEEECC-----------CCEECCCCC--CEEE
T ss_conf 897-22799997878997899979148799886996767999899-----------878898999--7688
No 6
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=0 Score=430.96 Aligned_cols=348 Identities=28% Similarity=0.408 Sum_probs=278.2
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHC--CCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCCCEE
Q ss_conf 89999998602334306760284202344320--1355377870023322014786200035311215678741256357
Q gi|254780605|r 181 EKIRDICKILHQKEVGAVFICDPSSIAWIFNI--RGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKALLSAVAIV 258 (609)
Q Consensus 181 eKi~~ir~~L~~~~~daliit~~d~IaWLlNi--RG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~k~~~~~~~~l~~~~~~ 258 (609)
+|++||++.|+++++|++++++++|++|+++. .|.+-+ .+ ++|..+++..++++.... ...+.........
T Consensus 2 ~R~~rl~~~m~~~~iDa~ll~~~~n~~~~~~~~~tg~~~~-----~~-~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 74 (359)
T 2zsg_A 2 DRSERLIQLISEEGIDAFLIMNIENSARASSVYFSGFTGS-----FS-IILISENTRLLITDSRYT-VQAKQETDFEVRE 74 (359)
T ss_dssp CCHHHHHHHHHTTTCCEEEEEESTTTTHHHHHHHHCCCSS-----CE-EEEEETTEEEEEECTTTH-HHHHHHCCSEEEE
T ss_pred CHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCCC-----CE-EEEEECCCEEEEECCCCH-HHHHHHCCCCEEE
T ss_conf 3899999999877999999906056403227323698746-----68-999959937999887347-9997525983799
Q ss_pred ECHHHHHHHHHHCCC--CCCEEEECCCCCCHHHHHHHHHC--CCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 074451577863013--57428972531778897531213--95675154321156661999999879999844389999
Q gi|254780605|r 259 LDMDMMDSRLVCLAR--TSMPILIDPKWISYRFFKVIAQK--NGVMVEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMV 334 (609)
Q Consensus 259 ~~~~~~~~~l~~l~~--~~~~i~id~~~~s~~~~~~l~~~--~~~~i~~~~pI~~lRaiKn~~EI~~mr~Ahi~DgvAl~ 334 (609)
....++...+..... ..++++++...+++..++.+.+. +..++...+++..+|+||++.||+.||+|......|+.
T Consensus 75 ~~~~~~~~~l~~~l~~~~~~~igv~~~~~~~~~~~~l~~~l~~~~~vd~~~~~~~~R~iKs~~Ei~~~r~A~~i~~~~~~ 154 (359)
T 2zsg_A 75 VKGGDFIDVLKKTVNDLKIKTIALEEERVSLSLFRRISSAFGDRKFIGIDDEVKQMRMVKDEGEIEKIKQAIEISERAFL 154 (359)
T ss_dssp C---CCHHHHHHHHHHTTCCEEEECGGGSBHHHHHHHHHHTTTCEEEECHHHHHHHHHBCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 61489899999998760476499841325489997763228984684171699997707999999999999999999999
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCC
Q ss_conf 99875332100124530188999999987543302785555410000123354322224554332050389879983032
Q gi|254780605|r 335 YFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGA 414 (609)
Q Consensus 335 kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipHY~~~~~s~~~i~~~~~~LiDsG~ 414 (609)
+++. ....|+||.+++..+.....+ .+..+++|++++++|+|++.+|+.+ +++.+++|+++++|+|+
T Consensus 155 ~~~~----~~~~G~te~ei~~~~~~~~~~------~g~~~~~~~~~v~~g~~~~~~~~~~---~~~~~~~gd~v~~d~g~ 221 (359)
T 2zsg_A 155 ETVQ----QIRAGMTEKEIAALLEYTMRK------EGAEGVAFDTIVASGCRSALPHGKA---SDKVVERGDVIVIDFGA 221 (359)
T ss_dssp HHHT----TCCTTCBHHHHHHHHHHHHHH------TTCSEESSCCEEEEGGGGGSTTCCC---CSCBCCTTCEEEEEECE
T ss_pred HHHH----HHCCCCCHHHHHHHHHHHHHH------CCCCCCCCCCEECCCCCCCCCCCCC---CCCEECCCCEEEEEECC
T ss_conf 9887----523788577877666667775------1764224661431467744443554---44320136669994033
Q ss_pred CEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCC
Q ss_conf 0105612221432103788888433366778888899721789788889999873667741865--47764323211356
Q gi|254780605|r 415 QYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGAD--FAHGVGHGVGSFLP 492 (609)
Q Consensus 415 qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~d--y~HgtGHGVG~~l~ 492 (609)
.|.+|+||+|||+++|+|++++++.|+.|++++-+... .+++|+++.++|.++|+++++.|++ |.|++||||| |+
T Consensus 222 ~~~gY~~d~~Rt~~~G~p~~~~~~~~~~~~~~~~~~~~-~~kpG~~~~~v~~~~~~~~~~~g~~~~~~~~~GHgiG--l~ 298 (359)
T 2zsg_A 222 TYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALK-IAKAGVTGKLLDSVAREFIREKGYGEFFGHSLGHGIG--LE 298 (359)
T ss_dssp EETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHH-HCCTTCBHHHHHHHHHHHHHHTTCGGGBCSCSEEECS--SS
T ss_pred CCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCC--CC
T ss_conf 03871233023204687407899999999999999999-7179995331589999999972887635551655107--87
Q ss_pred CCCCCCCCCCCCCCEECCCCEEEECCCEEECCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCHHCC
Q ss_conf 0778862377898600569878846860356875215002599972787787766424221011653001107
Q gi|254780605|r 493 VHEGPQGISRTNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSEPETINNGECLMLGFNTLTLCPIDRKLI 565 (609)
Q Consensus 493 VHE~P~~is~~~~~~l~~Gmv~s~EPG~Y~~g~~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~vP~~~~li 565 (609)
+||+| .|+..++.+|+||||||+|||+|.||.+||||||.++||+. ++|.||-.| ++|+
T Consensus 299 ~~e~P-~i~~~~~~~L~~gmv~~iEp~~~~~~~~g~r~ed~~~Vt~~-----------G~e~lt~~p--~~l~ 357 (359)
T 2zsg_A 299 VHEGP-AISFRNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQ-----------GCEILTTLP--RSIF 357 (359)
T ss_dssp SSEEE-EESTTCCCBCCTTBEEEECCEEEETTTEEEECBEEEEEETT-----------EEEECCCSC--CSCE
T ss_pred CCCCC-CCCCCCCCCCCCCCEEEECCCEEECCCCEEEEEEEEEECCC-----------CCEECCCCC--CCEE
T ss_conf 78898-21689897569980999899188299778998359999499-----------247897969--8358
No 7
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, activator, chromosomal protein, coiled coil, DNA damage; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=0 Score=435.04 Aligned_cols=375 Identities=14% Similarity=0.159 Sum_probs=268.1
Q ss_pred CCHHHHHHHHHHHHCCC--CCEEEEECCC----CCH--------HHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCC
Q ss_conf 77388999999860233--4306760284----202--------344320135537787002332201478620003531
Q gi|254780605|r 177 RESQEKIRDICKILHQK--EVGAVFICDP----SSI--------AWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQ 242 (609)
Q Consensus 177 ~s~~eKi~~ir~~L~~~--~~daliit~~----d~I--------aWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~ 242 (609)
+.+.+|+++|++.|+++ ++|+++|..+ |+. .||| |.+.|- +.+++..+ .+.++++.+
T Consensus 11 ~~f~~Rl~~l~~~~~~~~~~~dal~i~~g~~~~d~~Y~~~~~~~~yLt---G~~~p~-----t~lvl~~~-~~~il~~~~ 81 (467)
T 3biq_A 11 DVFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAENPYQKTTILHNWLL---SYEFPA-----TLIALVPG-KVIIITSSA 81 (467)
T ss_dssp HHHHHHHHHHHHHGGGSTTCCSEEEEEECSCCTTSTTCHHHHHHHHHH---SSCCSS-----EEEEEETT-EEEEEEEHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEECC---CCCCCC-----EEEEECCC-EEEEEECCC
T ss_conf 999999999999877404699989998289987734402687715326---888776-----79998189-089995798
Q ss_pred CCC---HHHHHHH---CCC-CEEECH---------HHHHHHHHHCCCCCCEEEECC-CCCCH--------HHHHHHHHCC
Q ss_conf 121---5678741---256-357074---------451577863013574289725-31778--------8975312139
Q gi|254780605|r 243 YIN---EQLKALL---SAV-AIVLDM---------DMMDSRLVCLARTSMPILIDP-KWISY--------RFFKVIAQKN 297 (609)
Q Consensus 243 k~~---~~~~~~l---~~~-~~~~~~---------~~~~~~l~~l~~~~~~i~id~-~~~s~--------~~~~~l~~~~ 297 (609)
+.. +.....- ... ..+..+ ..+...+..+...+..+++.. +.... .+...+...+
T Consensus 82 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~d~~~g~~~~~~~~~~~~~~~~~~ 161 (467)
T 3biq_A 82 KAKHLQKAIDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAVKENE 161 (467)
T ss_dssp HHHHHHHHHGGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHHHHHT
T ss_pred CCEEECCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 65122242034440113862589980477421299999999999744796899943422057788999999998665279
Q ss_pred CEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCHHHHHHHHHHHHHHH---------
Q ss_conf 567515432115666199999987999984438999999875332100--124530188999999987543---------
Q gi|254780605|r 298 GVMVEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSL--ETITEIDIIKKLERCREEIGC--------- 366 (609)
Q Consensus 298 ~~~i~~~~pI~~lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~--~~iTE~~ia~~Le~~R~~~~~--------- 366 (609)
..++.....+..+|+||++.||+.||+|......||.+++.+++..+. ..++|.++++.++....+.+.
T Consensus 162 ~~~vd~~~~l~~lR~vKs~~Ei~~ir~A~~i~~~~~~~~~~~i~~gi~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~ 241 (467)
T 3biq_A 162 FNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKLSDKIENKIDDVKFLKQLSPDLS 241 (467)
T ss_dssp CEEEECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHHHHHHHHGGGCHHHHHHHHHHHH
T ss_pred CEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 82887589999999629999999999999999999999998765554355664699999999999986323320230110
Q ss_pred -------HHCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHH
Q ss_conf -------30278555541000012335432-2224554332050389879983032010561222143210378888843
Q gi|254780605|r 367 -------KMRNPLRDIAFNTIAASGPHAAI-IHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKY 438 (609)
Q Consensus 367 -------~~~~~~~~~SF~TIva~G~N~Ai-pHY~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~ 438 (609)
....+..++||+|||++|+|+|+ |||.+ ++++|++|+++|+|+|+.|.+|||||||||++ .|+++|++
T Consensus 242 ~~~~~~~~~~~~~~~~~y~~IvasG~n~~~~~h~~~---~~~~l~~gd~vlvD~G~~y~gY~sDitRT~~v-~~~~~~~~ 317 (467)
T 3biq_A 242 ALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARS---TNDQLYGNGCILASCGIRYNNYCSNITRTFLI-DPSEEMAN 317 (467)
T ss_dssp TTSCTTCCCCGGGEEESSCCEEECTTCCCCSTTCCC---CSSBCCCSEEEEEEECEEETTEECCEEEEEEE-SCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCEEEEEECEEECCCCCCCEEEEEE-ECCHHHHH
T ss_conf 023432223678777665751156776565677689---98632459989998355999561574379985-07589999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC----CCCCCCCCCCCCCCCCCCCCCCCC-CCCCCEECCCCE
Q ss_conf 336677888889972178978888999987366774186----547764323211356077886237-789860056987
Q gi|254780605|r 439 YFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGA----DFAHGVGHGVGSFLPVHEGPQGIS-RTNQEPLLPGMI 513 (609)
Q Consensus 439 ~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~----dy~HgtGHGVG~~l~VHE~P~~is-~~~~~~l~~Gmv 513 (609)
.|..|++++.+...+..++|+++.++|..||++|.++|. .|.|+|||||| |+|||.|..++ +++..+|+||||
T Consensus 318 ~y~~v~~~~~~~~~~~~kpG~~~~~v~~~~~~~i~~~g~~~~~~f~h~~GHgiG--l~~hE~p~~~~~~~~~~~L~~GMv 395 (467)
T 3biq_A 318 NYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIG--LEFRDSNFILNVKNDYRKIQRGDC 395 (467)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECS--SSSCCGGGBSSTTCCSCCCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCEECCCCE
T ss_conf 999999999999999976399599999999999997294544329999878257--866799986688999888799999
Q ss_pred EEECCCEEE------CCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCHHCCCHHHCCHHH
Q ss_conf 884686035------6875215002599972787787766424221011653001107867789999
Q gi|254780605|r 514 LSNEPGYYR------CGAFGIRIENVLCVSEPETINNGECLMLGFNTLTLCPIDRKLILVELLTNEE 574 (609)
Q Consensus 514 ~s~EPG~Y~------~g~~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~vP~~~~li~~~ll~~~e 574 (609)
||+|||||. ++.|||||||+|+||+.+.. .-+-+|-+|-+.+-|...|-.++|
T Consensus 396 ~tiepGiy~~~~~~~~~~~girieD~vlvt~~g~~--------~~~llt~~pk~~~~I~~~~~~~~~ 454 (467)
T 3biq_A 396 FNISFGFNNLKDSQSANNYALQLADTVQIPLDETE--------PPRFLTNYTKAKSQISFYFNNEEE 454 (467)
T ss_dssp EEEEEEEEEECCSSCSSCEEEEEEEEEECCSSTTS--------CCEESCCSCCCHHHHEECC-----
T ss_pred EEECCEECCCCCCCCCCCEEEEECCEEEEECCCCC--------CCEECCCCCCCHHHHHHHHCCCCC
T ss_conf 99838556688887668628995127999429985--------616886799539997456468566
No 8
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=100.00 E-value=0 Score=424.51 Aligned_cols=342 Identities=17% Similarity=0.142 Sum_probs=231.2
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCC----CCHHHHHH----------HHCCCCCC-EEECCCCCC
Q ss_conf 8899999986023343067602842023443201355377----87002332----------20147862-000353112
Q gi|254780605|r 180 QEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPC----SPYPLSRA----------ILYADGKA-EIFFDKQYI 244 (609)
Q Consensus 180 ~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~----tPv~~a~a----------iI~~~~~~-~Lfvd~~k~ 244 (609)
.+.-+|+|+.|+++++|+++|++++++.|++| |++| +|.|+.|+ ++..+++. .+|+.+...
T Consensus 13 ~~lq~R~r~lm~~~~lDalll~sg~~~~~~~~----D~~ypFrq~s~F~~YLtg~~~p~~~lvi~~~~~~~ll~~~~~d~ 88 (517)
T 3l24_A 13 ATLQKRTREIIERENLDGVVFHSGQAKRQFLD----DMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDF 88 (517)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCCCBCTTS----SCBCCCCCCHHHHTTSSCCSCSSCEEEECSSSCCEEEEECCCCS
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCEEEECC----CCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCEEEEEECCCCH
T ss_conf 99999999998526989899977962267059----86688656898775743789898899997899879999377402
Q ss_pred C----HHHHHHHCCCCEEECHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCEEECCCCCCHHHHHCCCHHHHH
Q ss_conf 1----567874125635707445157786301357428972531778897531213956751543211566619999998
Q gi|254780605|r 245 N----EQLKALLSAVAIVLDMDMMDSRLVCLARTSMPILIDPKWISYRFFKVIAQKNGVMVEGSDPSCLLRATKNKVEIE 320 (609)
Q Consensus 245 ~----~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~i~id~~~~s~~~~~~l~~~~~~~i~~~~pI~~lRaiKn~~EI~ 320 (609)
- .........................+......+.+-...........+ .........+++..+|+||++.||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~i~~lR~IKs~~EI~ 166 (517)
T 3l24_A 89 WHKVPDEPNEYWADYFDIELLVKPDQVEKLLPYDKARFAYIGEYLEVAQALGF--ELMNPEPVMNFYHYHRAYKTQYELA 166 (517)
T ss_dssp SSCCCCCCCSGGGGGSEEEEESSGGGCGGGSCSCCTTEEEESSCHHHHHHHTC--CCBSCHHHHHHHHHHHTSCCHHHHH
T ss_pred HHCCCCCCHHHHHHHCCHHHCCCHHHHHHHHHHCCCEEEEECCHHHHHHHCCC--CCCCCHHHHHHHHHHHCCCCHHHHH
T ss_conf 30377675688865416443037789998753336358980513556564464--3138077888999988379999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 79999844389999998753321001245301889999999875433027855554100001233543222245543320
Q gi|254780605|r 321 GMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNR 400 (609)
Q Consensus 321 ~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipHY~~~~~s~~ 400 (609)
.||+|....+.|+.+.+.++ ..|+||.+++..++...+. +..+.||++|+++|+|+|++||.++ +++
T Consensus 167 ~mR~A~~i~~~a~~~~~~~i----~pG~tE~ei~~~~~~~~~~-------~~~~~~~~~ivasG~n~a~~H~~~~--~~~ 233 (517)
T 3l24_A 167 CMREANKIAVQGHKAARDAF----FQGKSEFEIQQAYLLATQH-------SENDNPYGNIVALNENCAILHYTHF--DRV 233 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----HTTCCHHHHHHHHHHHHTC-------CGGGSSSCCEEEEGGGGGCTTCCCC--CSS
T ss_pred HHHHHHHHHHHHHHHHHHHC----CCCCCHHHHHHHHHHHHHC-------CCCCCCCCCEECCCCCCCCCCCCCC--HHC
T ss_conf 99999999999999877506----8987499999999999971-------7976887875525788667664651--002
Q ss_pred EECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH------
Q ss_conf 50389879983032010561222143210378888843336677888889972178978888999987366774------
Q gi|254780605|r 401 LLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWK------ 474 (609)
Q Consensus 401 ~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~------ 474 (609)
.+++|+++|+|+|++|.+||||+||||++|.++ +|+++|..|++++.++..+..| |++..++...+.+.+.+
T Consensus 234 ~~~~gdlvliD~G~~~~GY~sDitRT~~vg~~~-e~~~~y~~v~~a~~~~i~~~kp-G~~~~~i~~~~~~~i~~~l~~~g 311 (517)
T 3l24_A 234 APATHRSFLIDAGANFNGYAADITRTYDFTGEG-EFAELVATMKQHQIALMNQLAP-GKLYGELHLDCHQRVAQTLSDFN 311 (517)
T ss_dssp CCSSCCEEEEEEEEEETTEEEEEEEEEESSSCS-HHHHHHHHHHHHHHHHHTTCCT-TCBHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCEECCCCCCCEEEEEECCCH-HHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 356764389842620065124531899978604-5779999999999999998547-87288889999999999886568
Q ss_pred ------------CCC--CCCCCCCCCCCCCCCCCCCCCCCCC----------------CCCCEECCCCEEEECCCEEEC-
Q ss_conf ------------186--5477643232113560778862377----------------898600569878846860356-
Q gi|254780605|r 475 ------------YGA--DFAHGVGHGVGSFLPVHEGPQGISR----------------TNQEPLLPGMILSNEPGYYRC- 523 (609)
Q Consensus 475 ------------~g~--dy~HgtGHGVG~~l~VHE~P~~is~----------------~~~~~l~~Gmv~s~EPG~Y~~- 523 (609)
.|+ .|.|||||||| |+|||.|. ++. +++.+|+||||||||||||++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~H~~GHgiG--l~vHE~p~-~~~~~~~~~~~~~~~~~~~~~~~~Le~GMV~TIEPGIY~~~ 388 (517)
T 3l24_A 312 IVDLSADEIVAKGITSTFFPHGLGHHIG--LQVHDVGG-FMADEQGAHQEPPEGHPFLRCTRKIEANQVFTIEPGLYFID 388 (517)
T ss_dssp SBSSCHHHHHHTTCGGGTCCSCSCCBCS--SSSSCCCC-TTC---------------CCTTCBCCTTEEEEECCEEECCH
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 7304599999715545679999758888--66567866-55566555556654555445687328998998899727472
Q ss_pred ------------------------CCCCEEEEEEEEEEECCCCCCCCCCEEEEEECC
Q ss_conf ------------------------875215002599972787787766424221011
Q gi|254780605|r 524 ------------------------GAFGIRIENVLCVSEPETINNGECLMLGFNTLT 556 (609)
Q Consensus 524 ------------------------g~~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT 556 (609)
|.+||||||+|+||+. +.|.||
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~gGvRIED~VlVTed-----------G~E~LT 434 (517)
T 3l24_A 389 SLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHED-----------SLENMT 434 (517)
T ss_dssp HHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSS-----------CEEEHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCEEEECCC-----------CCEECC
T ss_conf 2001124655441014321466537884332748999899-----------576899
No 9
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, acetylation, peptidase D, polymorphism, collagen degradation, metalloaminopeptidase; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=100.00 E-value=0 Score=411.52 Aligned_cols=357 Identities=22% Similarity=0.296 Sum_probs=247.5
Q ss_pred HCCCCHHHHHHHHHHHHCCCCC----EEEEE-CCCC----------------CHHHHHHCCCCCCCCCCHHHHHHHHCC-
Q ss_conf 3587738899999986023343----06760-2842----------------023443201355377870023322014-
Q gi|254780605|r 174 YAGRESQEKIRDICKILHQKEV----GAVFI-CDPS----------------SIAWIFNIRGFDIPCSPYPLSRAILYA- 231 (609)
Q Consensus 174 ~aG~s~~eKi~~ir~~L~~~~~----dalii-t~~d----------------~IaWLlNiRG~Di~~tPv~~a~aiI~~- 231 (609)
+.-.-+++++++|.+.|+++.+ ..+++ +... +..||| |.+.|. ++++|..
T Consensus 19 ~p~~~~~~rR~~L~~~l~~~~~~~~~~~vvl~~~~~~~r~~~D~~y~FrQ~s~F~YLT---G~~~p~-----~~lvl~~~ 90 (494)
T 2iw2_A 19 VPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAF---GVTEPG-----CYGVIDVD 90 (494)
T ss_dssp EETHHHHHHHHHHHHHHHHCTTCCTTCEEEEECCCCEESTTSCCEECCCCCHHHHHHH---CCCSSS-----CEEEEETT
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECC---CCCCCC-----EEEEEECC
T ss_conf 8999999999999997144215578858999588424015899888766689735747---989888-----79999858
Q ss_pred CCCCEEECCCCCCC-----------HHHHHHHCCCCEEECHHHHHHHHHHCCCCCCEEEECCCCCCH--------HHHHH
Q ss_conf 78620003531121-----------567874125635707445157786301357428972531778--------89753
Q gi|254780605|r 232 DGKAEIFFDKQYIN-----------EQLKALLSAVAIVLDMDMMDSRLVCLARTSMPILIDPKWISY--------RFFKV 292 (609)
Q Consensus 232 ~~~~~Lfvd~~k~~-----------~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~i~id~~~~s~--------~~~~~ 292 (609)
.++.+||+...... +....... ...+.+.+.+...+..... .+......... ..+..
T Consensus 91 ~~~~~Lfv~~~d~~~~~w~g~~~~~e~a~~~~g-vd~v~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 166 (494)
T 2iw2_A 91 TGKSTLFVPRLPASHATWMGKIHSKEHFKEKYA-VDDVQYVDEIASVLTSQKP---SVLLTLRGVNTDSGSVCREASFDG 166 (494)
T ss_dssp TCCEEEEECCCCGGGTTTTCCCCCHHHHHHHHT-CSEEEEGGGHHHHHHHTCC---SCEECCCCBCTTTCCBCCCCCCTT
T ss_pred CCCEEEEECCCCHHHCEECCCCCCHHHHHHHHC-CCCCCCHHHHHHHHHHHCC---CCEEECCCCCCCHHHHHHHHHHCC
T ss_conf 994899973798788143167789999999869-7744668999999986163---306413564510678888876403
Q ss_pred HHHCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 12139567515432115666199999987999984438999999875332100124530188999999987543302785
Q gi|254780605|r 293 IAQKNGVMVEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPL 372 (609)
Q Consensus 293 l~~~~~~~i~~~~pI~~lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~ 372 (609)
+.............+..+|+||++.||+.||+|....+.|+...+ +....+++|.+++..++....+.+ ..
T Consensus 167 ~~~~~~~~~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~----~~~~~G~~E~ei~~~~~~~~~~~g-----~~ 237 (494)
T 2iw2_A 167 ISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVM----KAVKVGMKEYELESLFEHYCYSRG-----GM 237 (494)
T ss_dssp GGGSCEECSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHH----HHCCTTCBHHHHHHHHHHHHHHHH-----CC
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH----HHCCCCCCHHHHHHHHHHHHHHCC-----CC
T ss_conf 210246510456999998755999999999999999999999988----744689989999998888987427-----87
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-CCCCCEEECCCCEEEEECCCCEECCCCCCEEEEE-ECCCCHHHHHHHHHHHHHHHHH
Q ss_conf 5554100001233543222245-5433205038987998303201056122214321-0378888843336677888889
Q gi|254780605|r 373 RDIAFNTIAASGPHAAIIHYQA-TVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIA-IGDVDYEKKYYFTLVLKGMISV 450 (609)
Q Consensus 373 ~~~SF~TIva~G~N~AipHY~~-~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~-~G~~~~e~k~~yt~VLk~~ial 450 (609)
.+++|++|+|+|+|++++||.+ ...+|+++++|+++|+|.|+.|.+|+||+|||++ .|++|++|+++|.+|+.++.+.
T Consensus 238 ~~~~~~~iv~~g~n~~~~H~~~~~~~~~~~l~~Gd~vl~D~g~~~~gY~sDitRT~~~~G~~s~~~~~~~~~v~~~~~~~ 317 (494)
T 2iw2_A 238 RHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAV 317 (494)
T ss_dssp CEESSCCEEEEGGGGGCSSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEETTSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 76776655544656544333454578864334898688753222488856777587530467788889999999999999
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHCC-----------------C---CCCCCCCCCCCCCCCCCCCCCCCC---------
Q ss_conf 97217897888899998736677418-----------------6---547764323211356077886237---------
Q gi|254780605|r 451 STARFPQRTRGCDLDSIARIFLWKYG-----------------A---DFAHGVGHGVGSFLPVHEGPQGIS--------- 501 (609)
Q Consensus 451 ~~a~fp~g~~g~~lD~~aR~~l~~~g-----------------~---dy~HgtGHGVG~~l~VHE~P~~is--------- 501 (609)
..+..| |++..+++..+++.+.+.+ . .|.|||||||| |+|||.|. +.
T Consensus 318 ~~~~kp-G~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~H~~GH~iG--l~vHd~p~-~~~~~~~~~~~ 393 (494)
T 2iw2_A 318 MGAMKP-GVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLG--IDVHDVGG-YPEGVERIDEP 393 (494)
T ss_dssp HHHCCT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCS--SSSSCSCS-SCTTCCCCCST
T ss_pred HHHHCC-CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEECCCCCCCCCC--CCCCCCCC-CCCCCCCCCCC
T ss_conf 986178-985110127889999986421476530289998753683232469888777--63567766-57654334565
Q ss_pred ----CCCCCEECCCCEEEECCCEEEC--------------------------CCCCEEEEEEEEEEECCCCCCCCCCEEE
Q ss_conf ----7898600569878846860356--------------------------8752150025999727877877664242
Q gi|254780605|r 502 ----RTNQEPLLPGMILSNEPGYYRC--------------------------GAFGIRIENVLCVSEPETINNGECLMLG 551 (609)
Q Consensus 502 ----~~~~~~l~~Gmv~s~EPG~Y~~--------------------------g~~GiRIEn~v~v~~~~~~~~~~~~fl~ 551 (609)
.++..+|+||||||||||+|++ |.+||||||+|+||+. +
T Consensus 394 ~~~~~~~~~~L~~GMV~tiEPGiY~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gGiRiED~vlVTe~-----------G 462 (494)
T 2iw2_A 394 GLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGGVRIEEDVVVTDS-----------G 462 (494)
T ss_dssp TGGGCSCCCBCCTTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHHTTCCEEECBEEEEECSS-----------S
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCEEEECEEEEECCC-----------C
T ss_conf 65567789754899999889963657542100136775255237531434248872242318999799-----------6
Q ss_pred EEECCCCCCCHHCCC
Q ss_conf 210116530011078
Q gi|254780605|r 552 FNTLTLCPIDRKLIL 566 (609)
Q Consensus 552 Fe~lT~vP~~~~li~ 566 (609)
.|+||-+|-+.+-|.
T Consensus 463 ~e~LT~~p~~~~eIE 477 (494)
T 2iw2_A 463 IELLTCVPRTVEEIE 477 (494)
T ss_dssp EEECCCCCCSHHHHH
T ss_pred CEECCCCCCCHHHHH
T ss_conf 785888999999999
No 10
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H3/H4 chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=100.00 E-value=0 Score=420.25 Aligned_cols=363 Identities=13% Similarity=0.164 Sum_probs=260.6
Q ss_pred CCHHHHHHHHHHHHCCC--------CCEEEEECCC----CCH--------HHHHHCCCCCCCCCCHHHHHHHHCCCCCCE
Q ss_conf 77388999999860233--------4306760284----202--------344320135537787002332201478620
Q gi|254780605|r 177 RESQEKIRDICKILHQK--------EVGAVFICDP----SSI--------AWIFNIRGFDIPCSPYPLSRAILYADGKAE 236 (609)
Q Consensus 177 ~s~~eKi~~ir~~L~~~--------~~daliit~~----d~I--------aWLlNiRG~Di~~tPv~~a~aiI~~~~~~~ 236 (609)
..+..||++|++.+++. ++|++++... |+. .||| |.+.|-| .++++++ +++
T Consensus 11 ~~F~~Rl~~l~~~~~~~~~~~~~~~~~d~i~~~~g~~~~~~~y~k~~~~~~wL~---G~e~pdt-----~lvl~~~-~~~ 81 (444)
T 3cb6_A 11 ITFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQKSTALHTWLL---GYEFPST-----LILLEKH-RIT 81 (444)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCCTTCCCCHHHHHHHHHH---SSCCSSE-----EEEEETT-EEE
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCCCEECCHHHEHHH---CCCCCCE-----EEEECCC-CEE
T ss_conf 999999999999976345640344389989994388776764211220101231---7877566-----9998389-389
Q ss_pred EECCCCCCC--HHHHHHHCCC---CEEE---CH----HHHHHHHHHCCCCCCEEEECC-CCCCH----HHHHHHHH--CC
Q ss_conf 003531121--5678741256---3570---74----451577863013574289725-31778----89753121--39
Q gi|254780605|r 237 IFFDKQYIN--EQLKALLSAV---AIVL---DM----DMMDSRLVCLARTSMPILIDP-KWISY----RFFKVIAQ--KN 297 (609)
Q Consensus 237 Lfvd~~k~~--~~~~~~l~~~---~~~~---~~----~~~~~~l~~l~~~~~~i~id~-~~~s~----~~~~~l~~--~~ 297 (609)
+++...|.. ..+....... .++. +. ..+...+..+...+.++++-. +...- .+...+.. .+
T Consensus 82 ~l~~~kk~~~l~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~i~~~~~~vG~~~kd~~~g~~~~~~~~~l~~~~~~ 161 (444)
T 3cb6_A 82 ILTSVNKANMLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVFPKDKTQGKFINEWDSIFEPVKSE 161 (444)
T ss_dssp EEEEHHHHTTTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHHHHHTTTSEEEECTTCCCCSHHHHHHHHHHTTTGGG
T ss_pred EEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 98167368888877521256887489970466422577999999997632660899713355545799999999860599
Q ss_pred CEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--CCCCCCCHHHHHHHHHHHHHHHH-------
Q ss_conf 567515432115666199999987999984438999999-87533210--01245301889999999875433-------
Q gi|254780605|r 298 GVMVEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYF-LFWFYSQS--LETITEIDIIKKLERCREEIGCK------- 367 (609)
Q Consensus 298 ~~~i~~~~pI~~lRaiKn~~EI~~mr~Ahi~DgvAl~kf-l~wL~~~~--~~~iTE~~ia~~Le~~R~~~~~~------- 367 (609)
..++....++..+|+||++.||+.||+|......||.++ ..|++..+ ..++||.+++++++......+..
T Consensus 162 ~~~vD~s~~l~~lR~iKs~~EI~~mr~Aa~i~~~~~~~~~~~~i~~~i~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ 241 (444)
T 3cb6_A 162 FNLVDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFFQTKSLKL 241 (444)
T ss_dssp SEEEECHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCBHHHHHHHHHGGGGCHHHHTCGGGCC
T ss_pred CEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 85996789999998569999999999999989999999999999997502676019999999999998614566544202
Q ss_pred --HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHH
Q ss_conf --027855554100001233543222245543320503898799830320105612221432103788888433366778
Q gi|254780605|r 368 --MRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLK 445 (609)
Q Consensus 368 --~~~~~~~~SF~TIva~G~N~AipHY~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk 445 (609)
...+..++||+||+++|+|++++||.+ +++.+..||++|+|+|++|.+||||+||||++| |+++|+++|+.|++
T Consensus 242 ~~~~~~~~~~~y~piv~sG~~~~~~h~~~---s~~~~~~gd~vlid~G~~y~gY~sditRT~~v~-ps~e~~~~y~~~~~ 317 (444)
T 3cb6_A 242 GDIDLDQLEWCYTPIIQSGGSYDLKPSAI---TDDRNLHGDVVLCSLGFRYKSYCSNVGRTYLFD-PDSEQQKNYSFLVA 317 (444)
T ss_dssp TTCCGGGEEESSCCEEECTTCCCCSTTCC---CCSSBCCSSEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCC---CCCCCCCCCEEEEEEEECCCCEEEECCCCCCCC-CCHHHHHHHHHHHH
T ss_conf 56577766566686544468666777889---987213588799998131088865411035678-86899999999999
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC--C--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCE-
Q ss_conf 8888997217897888899998736677418--6--5477643232113560778862377898600569878846860-
Q gi|254780605|r 446 GMISVSTARFPQRTRGCDLDSIARIFLWKYG--A--DFAHGVGHGVGSFLPVHEGPQGISRTNQEPLLPGMILSNEPGY- 520 (609)
Q Consensus 446 ~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g--~--dy~HgtGHGVG~~l~VHE~P~~is~~~~~~l~~Gmv~s~EPG~- 520 (609)
+|.++..+..| |+++.+++..+|+++.+.+ + .|.|++||||| |++||.|..+++.++.+|++|||||+|||+
T Consensus 318 ~~~~~i~~lkp-G~~~~~v~~~~~~~i~~~~~~~~~~~~h~~GHgiG--l~~hE~p~~~~~~~~~~l~~GMv~~iepGi~ 394 (444)
T 3cb6_A 318 LQKKLFEYCRD-GAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGIG--IEFRESSLLVNAKNPRVLQAGMTLNLSIGFG 394 (444)
T ss_dssp HHHHHHHHCST-TCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECS--SSSCBGGGCCSTTCCCBCCTTCEEEEEEEEE
T ss_pred HHHHHHHHCCC-CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCEECCCCEEEECCCCC
T ss_conf 99987864479-99089987999999998377730368998255278--8778998766899998889997999868536
Q ss_pred ---------EECCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCHHCCC
Q ss_conf ---------3568752150025999727877877664242210116530011078
Q gi|254780605|r 521 ---------YRCGAFGIRIENVLCVSEPETINNGECLMLGFNTLTLCPIDRKLIL 566 (609)
Q Consensus 521 ---------Y~~g~~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~vP~~~~li~ 566 (609)
|.+|.|||||||+|+||+. +.|.||-+|-+.+-|.
T Consensus 395 ~l~~~~~~~~~~~~~gi~ieDtv~Vt~~-----------g~e~LT~~pk~~~~i~ 438 (444)
T 3cb6_A 395 NLINPHPKNSQSKEYALLLIDTIQITRS-----------DPIVFTDSPKAQGDIS 438 (444)
T ss_dssp EEECSSCCTTSCSEEEEEEEEEEECCSS-----------SCEETTCCCCSHHHHE
T ss_pred CCCCCCCCCCCCCCEEEEEEEEEEECCC-----------CCEECCCCCCCHHHCC
T ss_conf 6666666644167147999889999799-----------4776989999778827
No 11
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidase P, manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=100.00 E-value=0 Score=404.59 Aligned_cols=356 Identities=19% Similarity=0.254 Sum_probs=252.1
Q ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEECCCC---------------CHHHHHHCCCCCCCCCCHHHHHHHHCC----CCCC
Q ss_conf 587738899999986023343067602842---------------023443201355377870023322014----7862
Q gi|254780605|r 175 AGRESQEKIRDICKILHQKEVGAVFICDPS---------------SIAWIFNIRGFDIPCSPYPLSRAILYA----DGKA 235 (609)
Q Consensus 175 aG~s~~eKi~~ir~~L~~~~~daliit~~d---------------~IaWLlNiRG~Di~~tPv~~a~aiI~~----~~~~ 235 (609)
+-+.+++++++|++.|+++.+ +++++++. |+.||+++. .|. +++++.+ .+..
T Consensus 4 s~~Ef~~Rr~~L~~~m~~~~~-~il~s~~~~~r~~D~~y~Frq~snf~YLTG~~---~p~-----~~lvi~~~~~~~~~~ 74 (440)
T 2v3z_A 4 SRQEFQRRRQALVEQMQPGSA-ALIFAAPEVTRSADSEYPYRQNSDFWYFTGFN---EPE-----AVLVLIKSDDTHNHS 74 (440)
T ss_dssp CHHHHHHHHHHHHHHSCSSEE-EEEECCCCCEEETTEECCCCCCHHHHHHHCCC---CSS-----CEEEEEECSSSCEEE
T ss_pred CHHHHHHHHHHHHHHCCCCCE-EEEECCCCCCCCCCCCCCCCCCCCEEEECCCC---CCC-----EEEEEEECCCCCCEE
T ss_conf 989999999999974866888-99968974324788877766777735305989---988-----799998348998649
Q ss_pred EEECCCCCCCHH-----------HHHHHCCCCEEECHHHHHHHHHHCCCCCCEEEECCCCCCHHH------------HHH
Q ss_conf 000353112156-----------787412563570744515778630135742897253177889------------753
Q gi|254780605|r 236 EIFFDKQYINEQ-----------LKALLSAVAIVLDMDMMDSRLVCLARTSMPILIDPKWISYRF------------FKV 292 (609)
Q Consensus 236 ~Lfvd~~k~~~~-----------~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~i~id~~~~s~~~------------~~~ 292 (609)
+||+...-...+ ........ .....+............. .+........... ...
T Consensus 75 ~Lf~~~~d~~~~iw~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (440)
T 2v3z_A 75 VLFNRVRDLTAEIWFGRRLGQDAAPEKLGVD-RALAFSEINQQLYQLLNGL-DVVYHAQGEYAYADVIVNSALEKLRKGS 152 (440)
T ss_dssp EEEECCCCHHHHHHHCCCCHHHHHHHHHTCS-EEEEGGGHHHHHHHHHTTC-SEEECCTTSCHHHHHHHHHHHHHHHTCG
T ss_pred EEEECCCCHHHCEECCCCCCHHHHHHHCCCC-CCCCCCHHHHHHHHHHCCC-CEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9995799967701316645656543213654-0001101233456663154-2144225543100023444455665544
Q ss_pred HH--HCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH-HHHHHHHHHC
Q ss_conf 12--13956751543211566619999998799998443899999987533210012453018899999-9987543302
Q gi|254780605|r 293 IA--QKNGVMVEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLER-CREEIGCKMR 369 (609)
Q Consensus 293 l~--~~~~~~i~~~~pI~~lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~-~R~~~~~~~~ 369 (609)
.. .....++.....+..+|+||++.||+.||+|...-..|+ ..+......|+||.+++..++. +++.
T Consensus 153 ~~~~~~~~~~vd~~~~l~~~R~iKs~~Ei~~~r~a~~i~~~~~----~~~~~~~~~G~tE~ei~a~~~~~~~~~------ 222 (440)
T 2v3z_A 153 RQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAH----TRAMEKCRPGMFEYHLEGEIHHEFNRH------ 222 (440)
T ss_dssp GGTCCCCSEEECCHHHHHHHHHSCCHHHHHHHHHHHHHHHHHH----HHHHHHCCTTCBHHHHHHHHHHHHHHT------
T ss_pred HHCCCCCCCEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH----HHHHHHCCCCCCHHHHHHHHHHHHHHH------
T ss_conf 4225886415315999999983599999999999999999999----988876468988999999999999984------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEE-CCCCHHHHHHHHHHHHHHH
Q ss_conf 785555410000123354322224554332050389879983032010561222143210-3788888433366778888
Q gi|254780605|r 370 NPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAI-GDVDYEKKYYFTLVLKGMI 448 (609)
Q Consensus 370 ~~~~~~SF~TIva~G~N~AipHY~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~-G~~~~e~k~~yt~VLk~~i 448 (609)
+...+||++|+++|+|++.+||.+ +++++++|+++++|+|+.|.+|+||+||||++ |+|+++|+++|++|+.++-
T Consensus 223 -g~~~~~~~~i~~~g~~~~~~h~~~---~~~~~~~gd~v~~D~g~~~~gY~sD~tRt~~v~G~~~~~~~~~~~~~~~~~~ 298 (440)
T 2v3z_A 223 -GARYPSYNTIVGSGENGCILHYTE---NECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLE 298 (440)
T ss_dssp -TCCEESSCCEEEEGGGGGSTTCCC---CCSBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHH
T ss_pred -HHCCCCCCCEECCCCCCCCCCCCC---CCCCCCCCCEEEEEEEEEECCEECCCEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf -311246785542688655422467---7331448987999812499978636636999799289999999987668999
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHCCC--------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 89972178978888999987366774186--------------------5477643232113560778862377898600
Q gi|254780605|r 449 SVSTARFPQRTRGCDLDSIARIFLWKYGA--------------------DFAHGVGHGVGSFLPVHEGPQGISRTNQEPL 508 (609)
Q Consensus 449 al~~a~fp~g~~g~~lD~~aR~~l~~~g~--------------------dy~HgtGHGVG~~l~VHE~P~~is~~~~~~l 508 (609)
+...+..| |+++.+++..+++++.+.+. .|.||+|||+| |++||.| .+++.++.+|
T Consensus 299 ~~~~~~~p-G~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~Gh~~G--l~~he~p-~~~~~~~~~L 374 (440)
T 2v3z_A 299 TSLRLYRP-GTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLG--LDVHDVG-VYGQDRSRIL 374 (440)
T ss_dssp HHHHHCCT-TCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCS--SSSSCCS-CCCGGGCCCC
T ss_pred HHHHHHCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC--CCCCCCC-CCCCCCCCEE
T ss_conf 99987247-982899999999999975454175444322321046545652168668689--8888788-5679999875
Q ss_pred CCCCEEEECCCEEECCCC---------CEEEEEEEEEEECCCCCCCCCCEEEEEECCC-CCCCHHCCCHHHC
Q ss_conf 569878846860356875---------2150025999727877877664242210116-5300110786778
Q gi|254780605|r 509 LPGMILSNEPGYYRCGAF---------GIRIENVLCVSEPETINNGECLMLGFNTLTL-CPIDRKLILVELL 570 (609)
Q Consensus 509 ~~Gmv~s~EPG~Y~~g~~---------GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~-vP~~~~li~~~ll 570 (609)
+||||||+|||+|+++.. ||||||+|+||+. ++|+||. +|.+.+-|+.=|+
T Consensus 375 ~~gMv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVte~-----------G~e~LT~~~pk~~~eie~~m~ 435 (440)
T 2v3z_A 375 EPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVITET-----------GNENLTASVVKKPEEIEALMV 435 (440)
T ss_dssp CTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEEETT-----------EEEESSTTSCCSHHHHHHHHH
T ss_pred CCCCEEEECCEEEECCCCEECCCCCEEEEEECCEEEECCC-----------CCEECCCCCCCCHHHHHHHHH
T ss_conf 8997899899768689850412277379997238999799-----------573489999999999999999
No 12
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, structural genomics, center for structural genomics of infectious diseases; HET: SO4; 2.89A {Bacillus anthracis}
Probab=100.00 E-value=0 Score=374.86 Aligned_cols=352 Identities=22% Similarity=0.309 Sum_probs=244.7
Q ss_pred CHHHHHHHHHHHHCCCCCEEEEECCCC---------------CHHHHHHCCCCCCCCCCHHHHHHHHCCCC---CCEEEC
Q ss_conf 738899999986023343067602842---------------02344320135537787002332201478---620003
Q gi|254780605|r 178 ESQEKIRDICKILHQKEVGAVFICDPS---------------SIAWIFNIRGFDIPCSPYPLSRAILYADG---KAEIFF 239 (609)
Q Consensus 178 s~~eKi~~ir~~L~~~~~daliit~~d---------------~IaWLlNiRG~Di~~tPv~~a~aiI~~~~---~~~Lfv 239 (609)
-+++++++|++.|+++++ +++.+.+. |+.||| |.+-|. +++++..++ +.+||+
T Consensus 5 ~f~~Rr~rL~~~m~~~~i-~il~~~~~~~~~~D~~~pFrq~snf~YlT---G~~~p~-----~~lvl~~~~~~~~~iLfv 75 (427)
T 3ig4_A 5 FFAQNRERLVNTLPDESI-TILFAGQAPHMSADAHYKFVPNRNFYYVT---GIDEPN-----VIFMLKKFGNSVEETLFI 75 (427)
T ss_dssp HHHHHHHHHHTTSCSSEE-EEEECCCCCEEETTEECCCCCCHHHHHHH---CCCSTT-----CEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCCE-EEEECCCCEEECCCCCCCCCCCCCEEEEC---CCCCCC-----EEEEEEECCCCCEEEEEE
T ss_conf 999999999975856889-99947973341699887766679757846---889989-----799998469985489996
Q ss_pred CCCCC----------CHHHHHHHCCCCEEECHHHHHHHHHHCC--CCCCEEEECCC--------CCCHHHHHHHHH--CC
Q ss_conf 53112----------1567874125635707445157786301--35742897253--------177889753121--39
Q gi|254780605|r 240 DKQYI----------NEQLKALLSAVAIVLDMDMMDSRLVCLA--RTSMPILIDPK--------WISYRFFKVIAQ--KN 297 (609)
Q Consensus 240 d~~k~----------~~~~~~~l~~~~~~~~~~~~~~~l~~l~--~~~~~i~id~~--------~~s~~~~~~l~~--~~ 297 (609)
..... +................+.......... .....+.++.. .....+...+.. ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 155 (427)
T 3ig4_A 76 EKSDPVMEKWVGKTVSNEEAEKISGIKKVIYLDSFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVREQYPH 155 (427)
T ss_dssp CCCCTTGGGTTCCCCCHHHHHHHHCCSEEEEGGGHHHHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHHHCTT
T ss_pred CCCCHHHHHHHCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 78897786663553011223330476424334665444456653035314552034200011026778999998740787
Q ss_pred CEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 56751543211566619999998799998443899999987533210012453018899999998754330278555541
Q gi|254780605|r 298 GVMVEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAF 377 (609)
Q Consensus 298 ~~~i~~~~pI~~lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF 377 (609)
..++.....+..+|+||++.||+.||+|......|+ ..+...+..|+||.+++..++....+. +....||
T Consensus 156 ~~~~d~~~~~~~lR~iKs~~Ei~~lr~a~~i~~~~~----~~~~~~~~~G~te~e~~a~~~~~~~~~------g~~~~~~ 225 (427)
T 3ig4_A 156 VTIGNVYPNICELRVFKTDEEIEIIKEAIAVTKDGI----YNVLKHAKADMMEYELEAQFDFTLKSS------GIKHHAF 225 (427)
T ss_dssp CEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHH----HHHHHHCCSSEEHHHHHHHHHHHHHHT------TCCEESS
T ss_pred CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH----HHHHHCCCCCCCHHHHHHHHHHHHHHC------CCCCCCC
T ss_conf 642244899999970799999999999999999999----997651578984899999986678743------9855665
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEE-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 0000123354322224554332050389879983032010561222143210-378888843336677888889972178
Q gi|254780605|r 378 NTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAI-GDVDYEKKYYFTLVLKGMISVSTARFP 456 (609)
Q Consensus 378 ~TIva~G~N~AipHY~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~-G~~~~e~k~~yt~VLk~~ial~~a~fp 456 (609)
++|+++|+|++.+||.+ ++++|++|+++++|.|++|.+|++|+|||+++ |+|+++|+++|..+++++-++..+..
T Consensus 226 ~~~~~~g~~~~~~h~~~---~~~~i~~gd~v~~d~g~~~~gY~~d~~RT~~v~G~~~~~~~~~~~~~~~~~~~~~~~~k- 301 (427)
T 3ig4_A 226 NTILASGKNATVLHYED---NDAQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYNIVLNALKETTEIIK- 301 (427)
T ss_dssp CCEEEEGGGGGSTTCCC---CCSEECTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHTCC-
T ss_pred CCCCCCCCCCCCCCCCC---CCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC-
T ss_conf 65312478875653588---87615799889998334324543476179998878359999999999999999998717-
Q ss_pred CCCCHHHHHHHHHHHHHHC----CC-----C----CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCEEEC
Q ss_conf 9788889999873667741----86-----5----477643232113560778862377898600569878846860356
Q gi|254780605|r 457 QRTRGCDLDSIARIFLWKY----GA-----D----FAHGVGHGVGSFLPVHEGPQGISRTNQEPLLPGMILSNEPGYYRC 523 (609)
Q Consensus 457 ~g~~g~~lD~~aR~~l~~~----g~-----d----y~HgtGHGVG~~l~VHE~P~~is~~~~~~l~~Gmv~s~EPG~Y~~ 523 (609)
+|+++.+++.++|+.+.+. |+ + |+||+||++| +++||.| ..++.+|+||||||+|||+|.|
T Consensus 302 pG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~Hg~G~~~g--~~~~~~~----~~~~~~Le~GMv~~vEP~iy~~ 375 (427)
T 3ig4_A 302 PGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLG--LDTHDVG----TYKDRVLEEGMVITIEPGLYIE 375 (427)
T ss_dssp TTCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCS--SSSSCCC----CCTTCBCCTTCEEEECCEEEEG
T ss_pred CCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCC----CCCCCEECCCCEEEECCEEEEC
T ss_conf 998589918888999998776548553565556786888778789--9888678----9999876898489996977856
Q ss_pred CC-CCEEEEEEEEEEECCCCCCCCCCEEEEEECC-CCCCCHHCCCHHH
Q ss_conf 87-5215002599972787787766424221011-6530011078677
Q gi|254780605|r 524 GA-FGIRIENVLCVSEPETINNGECLMLGFNTLT-LCPIDRKLILVEL 569 (609)
Q Consensus 524 g~-~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT-~vP~~~~li~~~l 569 (609)
|. +||||||+|+||+. ++|.|| -+|-+..-|+-=|
T Consensus 376 ~~~~Gvried~v~VT~~-----------G~e~LT~~~p~~~~~ie~~~ 412 (427)
T 3ig4_A 376 EESIGIRIEDDILVTKD-----------GHENLSKDIIREVEEIEEFM 412 (427)
T ss_dssp GGTEEEECBEEEEECSS-----------SEEETTTTSCCSHHHHHHHH
T ss_pred CCCEEEEEEEEEEECCC-----------CCEECCCCCCCCHHHHHHHH
T ss_conf 98179995029999899-----------78368889999999999999
No 13
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=0 Score=340.00 Aligned_cols=231 Identities=16% Similarity=0.207 Sum_probs=195.0
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 56661999999879999844389999998753321001245301889999999875433027855554100001233543
Q gi|254780605|r 309 LLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAA 388 (609)
Q Consensus 309 ~lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~A 388 (609)
.|+.||++.||+.||+|...-..|+ .++.+.+..|+||.+++..++++..+.++. .......+|++|+++|+|++
T Consensus 4 ~m~~IKs~~EI~~mR~A~~i~~~~~----~~~~~~i~pG~te~el~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~ 78 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETL----DFITDHVKPNVTTNSLNDLCHNFITSHNAI-PAPLNYKGFPKSICTSINHV 78 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHH----HHHGGGCCTTCBHHHHHHHHHHHHHHTTCE-ETTTTGGGCCSSSEEEETTE
T ss_pred CCEEECCHHHHHHHHHHHHHHHHHH----HHHHHHCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCC
T ss_conf 7227789999999999999999999----999987769997999999999999986986-46766656764320567650
Q ss_pred CCCCCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 22224554332050389879983032010561222143210378888843336677888889972178978888999987
Q gi|254780605|r 389 IIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIA 468 (609)
Q Consensus 389 ipHY~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~a 468 (609)
.+|+.+ +++.+++||++++|.|+.|.+|++|+||||++|+|+++++++|+.|++++.++..+..| |+++.++|.++
T Consensus 79 ~~h~~~---~d~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~vg~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~~~dv~~a~ 154 (262)
T 3mx6_A 79 VCHGIP---NDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRP-GAKLGDIGYAI 154 (262)
T ss_dssp EECCCC---CSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCST-TCBHHHHHHHH
T ss_pred CCCCCC---CCCCCCCCCEEEEEEEEEECCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHH
T ss_conf 458989---98365899989998899999999221213664799989999999999999999997139-89999999999
Q ss_pred HHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCC----CCCCCEECCCCEEEECCCEEECC------------------C
Q ss_conf 3667741865-47764323211356077886237----78986005698788468603568------------------7
Q gi|254780605|r 469 RIFLWKYGAD-FAHGVGHGVGSFLPVHEGPQGIS----RTNQEPLLPGMILSNEPGYYRCG------------------A 525 (609)
Q Consensus 469 R~~l~~~g~d-y~HgtGHGVG~~l~VHE~P~~is----~~~~~~l~~Gmv~s~EPG~Y~~g------------------~ 525 (609)
|+++.++|++ +.|++||||| |++||.|. ++ +.++.+|++|||+|+|||+|.++ .
T Consensus 155 ~~~~~~~g~~~~~~~~GHgiG--l~~he~P~-i~~~~~~~~~~~L~~GmV~~iEp~~~~~~~~~~~~~~d~w~~~~~~g~ 231 (262)
T 3mx6_A 155 QSYAEKHNYSVVRDYTGHGIG--RVFHDKPS-ILNYGRNGTGLTLKEGMFFTVEPMINAGNYDTILSKLDGWTVTTRDKS 231 (262)
T ss_dssp HHHHHHTTCEECCSCCEEECS--SSSSEEEE-ECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEECTTTSCCEEETTCC
T ss_pred HHHHHHCCCCCCCCCCCCCCC--CCCCCCCC-CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEEECCC
T ss_conf 999998689428998628788--86068986-577776899978348978998634761777604533789668852687
Q ss_pred CCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCH
Q ss_conf 5215002599972787787766424221011653001
Q gi|254780605|r 526 FGIRIENVLCVSEPETINNGECLMLGFNTLTLCPIDR 562 (609)
Q Consensus 526 ~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~vP~~~ 562 (609)
+|+||||+|+||+. ++|.||..|-+.
T Consensus 232 ~g~riEd~v~VTe~-----------G~E~LT~~p~~L 257 (262)
T 3mx6_A 232 LSAQFEHTIGVTKD-----------GFEIFTLSPKKL 257 (262)
T ss_dssp CEEECBEEEEECSS-----------SEEESCCCTTCC
T ss_pred CEEEEEEEEEECCC-----------CCEECCCCCCCC
T ss_conf 48897309999699-----------377898997645
No 14
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=2.9e-43 Score=319.84 Aligned_cols=231 Identities=16% Similarity=0.162 Sum_probs=192.1
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66619999998799998443899999987533210012453018899999998754330278555541000012335432
Q gi|254780605|r 310 LRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAI 389 (609)
Q Consensus 310 lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~Ai 389 (609)
.|+|||+.||+.||+|...-..| +..+.+.+.+|+||.+++..+.....+.+..........+|++|+++|+|++.
T Consensus 1 a~~IKs~~EI~~~r~A~~i~~~~----~~~~~~~i~~G~te~ei~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~ 76 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEV----LEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVV 76 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHH----HHHHGGGCSTTCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSEEEETTEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH----HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCE
T ss_conf 96368999999999999999999----99999877489989999999999999856865456566688963665575340
Q ss_pred CCCCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 22245543320503898799830320105612221432103788888433366778888899721789788889999873
Q gi|254780605|r 390 IHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIAR 469 (609)
Q Consensus 390 pHY~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR 469 (609)
+||.|+ +++.+++||++++|.|+.|.+|++|+|||+++|+|++++++.|..|++++.+...+..| |+++.++|.++|
T Consensus 77 ~~~~~~--~~~~l~~Gd~v~~D~g~~~~GY~~d~~Rt~~~G~~~~~~~~~~~~~~~a~~~~~~~ikp-G~~~~dv~~a~~ 153 (263)
T 2gg2_A 77 CHGIPD--DAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKP-GINLREIGAAIQ 153 (263)
T ss_dssp ECCCCC--TTCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHHHH
T ss_pred ECCCCC--CCCCCCCCCEEEEEEEEEECCEEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHH
T ss_conf 666579--98366899989999788899999650010111774211114458999999999988438-991899999999
Q ss_pred HHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCC----CCCCEECCCCEEEECCCEEEC-----------------CCCC
Q ss_conf 667741865-477643232113560778862377----898600569878846860356-----------------8752
Q gi|254780605|r 470 IFLWKYGAD-FAHGVGHGVGSFLPVHEGPQGISR----TNQEPLLPGMILSNEPGYYRC-----------------GAFG 527 (609)
Q Consensus 470 ~~l~~~g~d-y~HgtGHGVG~~l~VHE~P~~is~----~~~~~l~~Gmv~s~EPG~Y~~-----------------g~~G 527 (609)
+++.++|++ +.|.+||||| +++||+|. ++. ..+.+|+||||+|+|||+|.+ |.+|
T Consensus 154 ~~~~~~g~~~~~~~~GHgiG--~~~he~p~-~~~~~~~~~~~~L~~gmv~~iEp~~~~~~~~~~~~~d~~~v~~~~~~~g 230 (263)
T 2gg2_A 154 KFVEAEGFSVVREYCGHGIG--RGFHEEPQ-VLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLS 230 (263)
T ss_dssp HHHHHTTCEECSSCCEEECS--SSSSEEEE-ECSSCCTTCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCE
T ss_pred HHHHHCCCCCCCCCCCCCCC--CCCCCCCC-CCCCCCCCCCEECCCCCEEEEECCEECCCCCEEECCCCCEEEEECCCCE
T ss_conf 99998499436774016878--73358974-3544354320134799889984847617773377278865885268628
Q ss_pred EEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 1500259997278778776642422101165300
Q gi|254780605|r 528 IRIENVLCVSEPETINNGECLMLGFNTLTLCPID 561 (609)
Q Consensus 528 iRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~vP~~ 561 (609)
+|+||+|+||+. +.|.||.-|-+
T Consensus 231 ~~~Ed~v~VTe~-----------G~e~LT~~~~~ 253 (263)
T 2gg2_A 231 AQYEHTIVVTDN-----------GCEILTLRKDD 253 (263)
T ss_dssp EECBEEEEEETT-----------EEEESSCCTTC
T ss_pred EEECCEEEECCC-----------CCEECCCCCCC
T ss_conf 996328999499-----------67778998963
No 15
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=3.2e-42 Score=312.53 Aligned_cols=228 Identities=20% Similarity=0.195 Sum_probs=180.8
Q ss_pred CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCC
Q ss_conf 115666199999987999984438999999875332100124530188999999987543302-7855554100001233
Q gi|254780605|r 307 SCLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMR-NPLRDIAFNTIAASGP 385 (609)
Q Consensus 307 I~~lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~-~~~~~~SF~TIva~G~ 385 (609)
-..||.|||+.||+.||+|...- .+.+.++.+.+.+|+||.+++..+.++..+.+.... .++. ++++++..+.
T Consensus 10 ~~~m~~VKs~~EI~~~R~A~~ia----~~~~~~~~~~i~pG~te~ev~~~~~~~~~~~g~~~~~~g~~--~~~~~~~~~~ 83 (262)
T 1o0x_A 10 HHHMIRIKTPSEIEKMKKAGKAV----AVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYG--GYKYATCVSV 83 (262)
T ss_dssp ---CCCCCCHHHHHHHHHHHHHH----HHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGG--GCCCSEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHH----HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCEEECC
T ss_conf 54305629899999999999999----99999999877689979999999999999828853236767--7776568536
Q ss_pred CCCCCCCCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 54322224554332050389879983032010561222143210378888843336677888889972178978888999
Q gi|254780605|r 386 HAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLD 465 (609)
Q Consensus 386 N~AipHY~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD 465 (609)
+.+..|+.+. +++.++.|+++++|.|++|.+|++|+|||+++|+|+++++++|+.|++++-+...+.. +|+++.+++
T Consensus 84 ~~~~~~~~~~--~~~~~~~gd~v~id~g~~~~gy~~d~tRT~~~G~~~~~~~~~~~~~~~a~~~~~~~~k-pG~~~~~v~ 160 (262)
T 1o0x_A 84 NEEVVHGLPL--KEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIK-PGIRLGDVS 160 (262)
T ss_dssp TTBCSCCCCC--TTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCC-TTSBHHHHH
T ss_pred CCCCCCCCCC--CCCCCCCCCCEEEEECEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHH
T ss_conf 7553332357--7501016983389822224777266654203078788999999999999999998747-998999999
Q ss_pred HHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCC----CCCCCEECCCCEEEECCCEEEC-----------------
Q ss_conf 9873667741865-47764323211356077886237----7898600569878846860356-----------------
Q gi|254780605|r 466 SIARIFLWKYGAD-FAHGVGHGVGSFLPVHEGPQGIS----RTNQEPLLPGMILSNEPGYYRC----------------- 523 (609)
Q Consensus 466 ~~aR~~l~~~g~d-y~HgtGHGVG~~l~VHE~P~~is----~~~~~~l~~Gmv~s~EPG~Y~~----------------- 523 (609)
.++|+++++.|++ +.|++||||| |++||+|. ++ +.++.+|+||||+|+|||+|.+
T Consensus 161 ~~~~~~~~~~g~~~~~~~~GHgiG--l~~he~p~-~~~~~~~~~~~~le~Gmv~tvEp~~~~~~~~~~~~~d~~~~~~~~ 237 (262)
T 1o0x_A 161 HCIQETVESVGFNVIRDYVGHGVG--RELHEDPQ-IPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVD 237 (262)
T ss_dssp HHHHHHHHHTTCEECCSSCEEECS--SSSSEEEE-ECSCCCTTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETT
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCC--CCCCCCCC-CCCCCCCCCCCCCCCCCEEEECCEEECCCCCEEECCCCCEEEECC
T ss_conf 999999998299978687407357--81678864-356567999878658968997773541787337726887798228
Q ss_pred CCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCC
Q ss_conf 8752150025999727877877664242210116
Q gi|254780605|r 524 GAFGIRIENVLCVSEPETINNGECLMLGFNTLTL 557 (609)
Q Consensus 524 g~~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~ 557 (609)
|.+|+||||+|+||+. +.|.||-
T Consensus 238 g~~g~~iEd~vlVTe~-----------G~E~LT~ 260 (262)
T 1o0x_A 238 GSRCAHFEHTILITEN-----------GAEILTK 260 (262)
T ss_dssp CCCEEECBEEEEECSS-----------SEEESSC
T ss_pred CCCEEEECEEEEECCC-----------CCEECCC
T ss_conf 9517775509999599-----------6856599
No 16
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=2.1e-41 Score=306.90 Aligned_cols=228 Identities=18% Similarity=0.204 Sum_probs=185.3
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 61999999879999844389999998753321001245301889999999875433027855554100001233543222
Q gi|254780605|r 312 ATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIH 391 (609)
Q Consensus 312 aiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipH 391 (609)
+|||+.||+.||+|...-..|+ .++.+.+..|+||.+++..++++..+.++.. ......+|++|+++|+|++.+|
T Consensus 2 ~IKs~~Ei~~~R~A~~i~~~a~----~~~~~~i~pG~se~El~~~~~~~~~~~~a~~-~~~~~~~~~~~~~~g~~~~~~h 76 (252)
T 1qxy_A 2 IVKTEEELQALKEIGYICAKVR----NTMQAATKPGITTKELDNIAKELFEEYGAIS-APIHDENFPGQTCISVNEEVAH 76 (252)
T ss_dssp BCCSHHHHHHHHHHHHHHHHHH----HHHHHHCCTTCBHHHHHHHHHHHHHHHTCEE-HHHHHHCCSSSSEEEETTEEEC
T ss_pred EECCHHHHHHHHHHHHHHHHHH----HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCEEEECCCCCCCC
T ss_conf 8288999999999999999999----9999867589969999999999999847736-7667778686579754323357
Q ss_pred CCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 2455433205038987998303201056122214321037888-884333667788888997217897888899998736
Q gi|254780605|r 392 YQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDY-EKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARI 470 (609)
Q Consensus 392 Y~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~-e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~ 470 (609)
|.+ ++++|++|+++++|+|++|.+|++|+|||+++|+|++ +++++|..++.++-+...+. .+|+++.+++.++|.
T Consensus 77 ~~~---~~~~i~~Gd~v~~d~g~~~~gY~~D~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-kpG~~~~~v~~~~~~ 152 (252)
T 1qxy_A 77 GIP---SKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKV-KPGTKLSNIGKAVHN 152 (252)
T ss_dssp CCC---CSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHHHHHTTC-CTTCBTHHHHHHHHH
T ss_pred CCC---CCCCCCCCCEEEEECCEEECCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHH
T ss_conf 999---9742468998998625189989740056223588862025789999999999999872-799844268999999
Q ss_pred HHHHCCCC-CCCCCCCCCCCCCCCCCCCCC----CCCCCCCEECCCCEEEECCCEEECC-----------------CCCE
Q ss_conf 67741865-477643232113560778862----3778986005698788468603568-----------------7521
Q gi|254780605|r 471 FLWKYGAD-FAHGVGHGVGSFLPVHEGPQG----ISRTNQEPLLPGMILSNEPGYYRCG-----------------AFGI 528 (609)
Q Consensus 471 ~l~~~g~d-y~HgtGHGVG~~l~VHE~P~~----is~~~~~~l~~Gmv~s~EPG~Y~~g-----------------~~Gi 528 (609)
.+.+.++. |.|++|||+| +.+||.|.. +.+.++.+|++|||+|+|||+|.++ .+|+
T Consensus 153 ~~~~~~~~~~~~~~Gh~~G--~~~~~~p~~~~~~~~~~~~~~le~GMV~~iEP~i~~~~~~~~~~~~~w~~~~~~g~~g~ 230 (252)
T 1qxy_A 153 TARQNDLKVIKNLTGHGVG--LSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVA 230 (252)
T ss_dssp HHHHTTCEECTTCCEEECS--SSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESSCSSCEECSSSSCEECTTCCCEE
T ss_pred HHHHCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCEEECCCCCEEEEECCCEEE
T ss_conf 9985387512555577677--74023763223556666676588973999899564388641434888669850796388
Q ss_pred EEEEEEEEEECCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 500259997278778776642422101165300
Q gi|254780605|r 529 RIENVLCVSEPETINNGECLMLGFNTLTLCPID 561 (609)
Q Consensus 529 RIEn~v~v~~~~~~~~~~~~fl~Fe~lT~vP~~ 561 (609)
||||+|+||+. +-|.||-.|-|
T Consensus 231 r~Ed~vlVTe~-----------G~e~LT~~~~e 252 (252)
T 1qxy_A 231 QIEHTVIVTKD-----------GPILTTKIEEE 252 (252)
T ss_dssp EEEEEEECCTT-----------CCEETTCC---
T ss_pred EEEEEEEECCC-----------CCEECCCCCCC
T ss_conf 85309999399-----------42879899999
No 17
>3iu7_A Methionine aminopeptidase; enzyme-inhibitor complex, cobalt, hydrolase, metal-binding, protease; HET: FCD; 1.40A {Mycobacterium tuberculosis} PDB: 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A
Probab=100.00 E-value=1.2e-39 Score=294.52 Aligned_cols=234 Identities=16% Similarity=0.168 Sum_probs=193.0
Q ss_pred CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 54321156661999999879999844389999998753321001245301889999999875433027855554100001
Q gi|254780605|r 303 GSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAA 382 (609)
Q Consensus 303 ~~~pI~~lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva 382 (609)
...+....|.|||+.||+.||+|......|+... ...+..|+||.+++..+.++..+.+... ..+....|.++++
T Consensus 34 ~~~~~~~~r~IKs~~EI~~mR~A~~i~~~a~~~~----~~~i~pG~tE~ei~~~~~~~~~~~g~~~-~~~~~~~~~~~~~ 108 (288)
T 3iu7_A 34 PAAQEGSEPWVQTPEVIEKMRVAGRIAAGALAEA----GKAVAPGVTTDELDRIAHEYLVDNGAYP-STLGYKGFPKSCC 108 (288)
T ss_dssp SSCSCSSSCSBCCHHHHHHHHHHHHHHHHHHHHH----HHHCCTTCBHHHHHHHHHHHHHHTTCEE-TTTTGGGCCSSEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH----HHHCCCCCCHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCC
T ss_conf 9876566786699999999999999999999999----9877589999999999999999869966-5456568875200
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 23354322224554332050389879983032010561222143210378888843336677888889972178978888
Q gi|254780605|r 383 SGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGC 462 (609)
Q Consensus 383 ~G~N~AipHY~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~ 462 (609)
+|.|++.+|+.+ +++.++.|+++++|.|+.|.+|++|+|||+++|+|++++++.|..+++++-+...+..| |+++.
T Consensus 109 ~~~~~~~~~~~~---~~~~~~~Gd~v~vD~g~~~~GY~~D~~RT~~~g~~~~~~~~~~~~~~e~~~~~i~~~rP-G~~~~ 184 (288)
T 3iu7_A 109 TSLNEVICHGIP---DSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKP-GRALS 184 (288)
T ss_dssp EEETTEEECCCC---SSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TSBTH
T ss_pred CCCCEEECCCCC---CCCCCCCCCEEEEEEEEEECCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC-CCCHH
T ss_conf 345326337899---87342566679985115899898413530462464421005899999999999987059-98999
Q ss_pred HHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCC---CCCCCCEECCCCEEEECCCEEEC---------------
Q ss_conf 9999873667741865-4776432321135607788623---77898600569878846860356---------------
Q gi|254780605|r 463 DLDSIARIFLWKYGAD-FAHGVGHGVGSFLPVHEGPQGI---SRTNQEPLLPGMILSNEPGYYRC--------------- 523 (609)
Q Consensus 463 ~lD~~aR~~l~~~g~d-y~HgtGHGVG~~l~VHE~P~~i---s~~~~~~l~~Gmv~s~EPG~Y~~--------------- 523 (609)
+++..+++.+.++|+. +.|.+|||+| +.+||+|... .+.++.+|+||||||+|||+|.+
T Consensus 185 dv~~a~~~~~~~~g~~~~~~~~ghg~g--~~~~~~p~~~~~~~~~~~~~Le~GMV~tiEP~iy~~~~~~~~~~d~w~~~t 262 (288)
T 3iu7_A 185 VIGRVIESYANRFGYNVVRDFTGHGIG--TTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVT 262 (288)
T ss_dssp HHHHHHHHHHHHTTCEECSSSCEEBCS--SSSSCSCEECSSCCTTCCCBCCTTBEEEECCEEESSCSCEEECTTSCCEEE
T ss_pred HHHHHHHHHHHHCCCCEEECEEECCCC--CCCCCCCCCCCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEE
T ss_conf 987999999998499742030351687--765558743434667778772799689989964318876155268863785
Q ss_pred --CCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCC
Q ss_conf --87521500259997278778776642422101165
Q gi|254780605|r 524 --GAFGIRIENVLCVSEPETINNGECLMLGFNTLTLC 558 (609)
Q Consensus 524 --g~~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~v 558 (609)
|.+|+||||+|+||+. ++|.||.+
T Consensus 263 ~~g~~gvriEd~vlVTe~-----------G~E~LT~l 288 (288)
T 3iu7_A 263 KDRKWTAQFEHTLLVTDT-----------GVEILTCL 288 (288)
T ss_dssp TTCCCEEECBEEEEECSS-----------SEEESSCC
T ss_pred ECCCCEEEECCEEEECCC-----------CCEEECCC
T ss_conf 269757885618999499-----------37770779
No 18
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitabread fold; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=3e-37 Score=277.93 Aligned_cols=224 Identities=19% Similarity=0.181 Sum_probs=184.0
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 61999999879999844389999998753321001245301889999999875433027855554100001233543222
Q gi|254780605|r 312 ATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIH 391 (609)
Q Consensus 312 aiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipH 391 (609)
.|||+.||+.||+|...-..| +..+.+.+..|+||.+++..++.+-.+.++.. ......+|+.+++++.|.+++|
T Consensus 74 ~IKs~~EI~~mR~A~~ia~~a----l~~a~~~ikpGvte~Ei~~~~~~~~~~~ga~~-s~~~y~~fp~s~~~s~n~~~~h 148 (329)
T 2b3h_A 74 KLLSSEDIEGMRLVCRLAREV----LDVAAGMIKPGVTTEEIDHAVHLACIARNCYP-SPLNYYNFPKSCCTSVNEVICH 148 (329)
T ss_dssp CCCCHHHHHHHHHHHHHHHHH----HHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEE-TTTTGGGCCSSSEEEETTEEEC
T ss_pred EECCHHHHHHHHHHHHHHHHH----HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEE-CCCCCCCCCCEEECCCCEEECC
T ss_conf 788999999999999999999----99999878589979999999999999866973-5656667786446788716317
Q ss_pred CCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 24554332050389879983032010561222143210378888843336677888889972178978888999987366
Q gi|254780605|r 392 YQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIF 471 (609)
Q Consensus 392 Y~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~ 471 (609)
+.| +++.+++|+++++|.|+.|.+|++|+||||++|++++++++.|..+++++-+...+.. +|++..+++.++++.
T Consensus 149 ~~p---~~r~l~~GDiv~iD~~~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~k-PG~~~~dI~~ai~~~ 224 (329)
T 2b3h_A 149 GIP---DRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVK-PGVRYRELGNIIQKH 224 (329)
T ss_dssp CCC---CSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCC-TTCBTTHHHHHHHHH
T ss_pred CCC---CCCCCCCCCEEEEECCEEECCEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHH
T ss_conf 899---8745468988998434512999641241567678899999999999999999999726-998899999999999
Q ss_pred HHHCCCC-CCCCCCCCCCCCCCCCCCCCCCC---CCCCCEECCCCEEEECCCEEE-----------------CCCCCEEE
Q ss_conf 7741865-47764323211356077886237---789860056987884686035-----------------68752150
Q gi|254780605|r 472 LWKYGAD-FAHGVGHGVGSFLPVHEGPQGIS---RTNQEPLLPGMILSNEPGYYR-----------------CGAFGIRI 530 (609)
Q Consensus 472 l~~~g~d-y~HgtGHGVG~~l~VHE~P~~is---~~~~~~l~~Gmv~s~EPG~Y~-----------------~g~~GiRI 530 (609)
+.++||. +.|.+|||+| ...|++|.... .....+|+||||||+|||+|. +|.+|+|+
T Consensus 225 ~~~~G~~~~~~~~ghgiG--~~~~~~~~~~~~~~~~~~~~Le~GMVftIEP~i~~~~~~~~~~~d~wt~~t~dg~~gar~ 302 (329)
T 2b3h_A 225 AQANGFSVVRSYCGHGIH--KLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQF 302 (329)
T ss_dssp HHHTTCEECCSCCEEECS--SSSSEEEEECCSSSCCCCCBCCTTCEEEECCEEESSCCCEEECTTSCCEEETTCCCEEEC
T ss_pred HHHCCCCEEECCCCCCCC--CCCCCCCCCCCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEEECCCCEEEE
T ss_conf 998699542042465776--743468743665544678884698089989951038875144378865997379767996
Q ss_pred EEEEEEEECCCCCCCCCCEEEEEECCC
Q ss_conf 025999727877877664242210116
Q gi|254780605|r 531 ENVLCVSEPETINNGECLMLGFNTLTL 557 (609)
Q Consensus 531 En~v~v~~~~~~~~~~~~fl~Fe~lT~ 557 (609)
|++|+||+. +.|.||-
T Consensus 303 EdtvlVTe~-----------G~EvLT~ 318 (329)
T 2b3h_A 303 EHTLLVTDT-----------GCEILTR 318 (329)
T ss_dssp BEEEEECSS-----------SEEETTC
T ss_pred CCEEEECCC-----------CCEECCC
T ss_conf 529999799-----------5777789
No 19
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcription; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=99.97 E-value=8.8e-29 Score=218.95 Aligned_cols=205 Identities=10% Similarity=0.065 Sum_probs=162.3
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH----CCCCCCCCCCCCCCC
Q ss_conf 1566619999998799998443899999987533210012453018899999998754330----278555541000012
Q gi|254780605|r 308 CLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKM----RNPLRDIAFNTIAAS 383 (609)
Q Consensus 308 ~~lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~----~~~~~~~SF~TIva~ 383 (609)
...|+|||+.||+.+|+|-..-..+ +..+...+.+|+||.|++...+++..+.+++. .....|++|||.+
T Consensus 14 ~~~~~i~~d~~i~KyR~Aa~Ia~~~----l~~v~~~ikpG~s~~El~~~~~~~i~e~gak~~~~~~~~~~G~afPtci-- 87 (401)
T 2q8k_A 14 QQEQTIAEDLVVTKYKMGGDIANRV----LRSLVEASSSGVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTSI-- 87 (401)
T ss_dssp CCCCCTTSHHHHHHHHHHHHHHHHH----HHHHHHHCC-CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEEEE--
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHH----HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE--
T ss_conf 7775038999999999999999999----9999977769997999999999999972585336665546777767361--
Q ss_pred CCCCCCCCCCCCCC-CCEEECCCCEEEEECCCCEECCCCCCEEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 33543222245543-32050389879983032010561222143210378-----8888433366778888899721789
Q gi|254780605|r 384 GPHAAIIHYQATVQ-SNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDV-----DYEKKYYFTLVLKGMISVSTARFPQ 457 (609)
Q Consensus 384 G~N~AipHY~~~~~-s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~-----~~e~k~~yt~VLk~~ial~~a~fp~ 457 (609)
..|..+.||.|... +++.|++||++.||.|++|.||++|+||||++|.+ ++++++++..+.+|.-+..+++. +
T Consensus 88 SvN~~v~H~~P~~~~~~~~Lk~GDvVkID~G~~~dGY~aD~arT~~vG~~~~~~~s~~~~~l~~aa~~a~~~ai~~vk-P 166 (401)
T 2q8k_A 88 SVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVK-P 166 (401)
T ss_dssp EETTEEECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHCS-T
T ss_pred CCCCEEECCCCCCCCCCEECCCCCEEEEEEEEEECCEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-C
T ss_conf 136664236788888771626999899973112388300325999988704455799999999999998764454137-8
Q ss_pred CCCHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCC---------CCCCEECCCCEEEECCCEE
Q ss_conf 788889999873667741865-477643232113560778862377---------8986005698788468603
Q gi|254780605|r 458 RTRGCDLDSIARIFLWKYGAD-FAHGVGHGVGSFLPVHEGPQGISR---------TNQEPLLPGMILSNEPGYY 521 (609)
Q Consensus 458 g~~g~~lD~~aR~~l~~~g~d-y~HgtGHGVG~~l~VHE~P~~is~---------~~~~~l~~Gmv~s~EPG~Y 521 (609)
|++..++..++++++.++|+. +.+.+|||+| ..+||+|..|-. .....|++|||++|||++.
T Consensus 167 G~~~~ei~~ai~~v~~~~g~~~v~~~~gH~ig--~~~~~~~~~I~~~p~~~~~~~~~~~~le~G~V~aIEp~vs 238 (401)
T 2q8k_A 167 GNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLK--QHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVS 238 (401)
T ss_dssp TCBHHHHHHHHHHHHHTTTCEECTTCEEEEEB--TTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC--CEEECCCCEECCCCCCCCCCCCCCCEEEECCEEEEEEEEC
T ss_conf 84034058999887885598433476556652--2672698663568986545789873899681887875430
No 20
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=99.96 E-value=4.2e-28 Score=214.21 Aligned_cols=201 Identities=16% Similarity=0.127 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99879999844389999998753321001245301889999999875433027855554100001233543222245543
Q gi|254780605|r 318 EIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQ 397 (609)
Q Consensus 318 EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipHY~~~~~ 397 (609)
||+.||+|-..-..|+ ..+.+.+..|+||.|+++.++.+..+.++ .+||+++++.|.++ .||.|.+.
T Consensus 2 EIe~~r~Ag~Ia~~~~----~~~~~~ikpG~te~el~~~~~~~i~~~G~-------~~afp~~is~n~~~--~h~~P~~~ 68 (295)
T 1xgs_A 2 DTEKLMKAGEIAKKVR----EKAIKLARPGMLLLELAESIEKMIMELGG-------KPAFPVNLSINEIA--AHYTPYKG 68 (295)
T ss_dssp CHHHHHHHHHHHHHHH----HHHHHHCCTTCBHHHHHHHHHHHHHHTTC-------EESSCCEEEETTEE--ECCCCCTT
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHCCCCCCHHHHHHHHHHHHHHCCC-------CCCCCEEEECCCCC--CCCCCCCC
T ss_conf 1899999999999999----99998786899499999999999998799-------27787058818752--57678888
Q ss_pred CCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 32050389879983032010561222143210378888843336677888889972178978888999987366774186
Q gi|254780605|r 398 SNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGA 477 (609)
Q Consensus 398 s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~ 477 (609)
++++|++||+++||.|++|.||++|+|||+.+|++.++. +..++.+.-+..++.. +|++..+++.++++++.++|+
T Consensus 69 ~~~~l~~GDiV~iD~g~~~~GY~aD~arT~~vg~~~~~l---~~a~~~al~~ai~~ik-pG~~~~eI~~~i~~~~~~~g~ 144 (295)
T 1xgs_A 69 DTTVLKEGDYLKIDVGVHIDGFIADTAVTVRVGMEEDEL---MEAAKEALNAAISVAR-AGVEIKELGKAIENEIRKRGF 144 (295)
T ss_dssp CCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTSCCCHH---HHHHHHHHHHHHHHCS-TTCBTHHHHHHHHHHHHTTTC
T ss_pred CCEEECCCCEEEEEECEEECCEEECCEEEEECCCCCHHH---HHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHCCC
T ss_conf 885723899999972314773873034177614320789---9999999999888745-997212677999999998187
Q ss_pred C-CCCCCCCCCCCCCCCCCCCCCC----CCCCCCEECCCCEEEECCCEEECCCCCEEEEEEEEEEE
Q ss_conf 5-4776432321135607788623----77898600569878846860356875215002599972
Q gi|254780605|r 478 D-FAHGVGHGVGSFLPVHEGPQGI----SRTNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSE 538 (609)
Q Consensus 478 d-y~HgtGHGVG~~l~VHE~P~~i----s~~~~~~l~~Gmv~s~EPG~Y~~g~~GiRIEn~v~v~~ 538 (609)
. +.+.+|||+|.+ .+||+|. | .+..+..|+||||+|+||.+. .|.+.++-.+...+..
T Consensus 145 ~~~~~~~gH~ig~~-~~h~~~~-i~~~~~~~~~~~l~~GmV~aIEP~~s-~G~g~v~~~~~~~~~~ 207 (295)
T 1xgs_A 145 KPIVNLSGHKIERY-KLHAGIS-IPNIYRPHDNYVLKEGDVFAIEPFAT-IGAGQVIEVPPTLIYM 207 (295)
T ss_dssp EECTTCCEEECBTT-BSSCSCE-ECSSCCTTCCCBCCTTCEEEECCEEE-SSCSCEEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCC-CCCCCCE-ECCCCCCCCCCEEEECEEEEEEEEEE-CCCCEEEECCCCCEEE
T ss_conf 62235368762575-5658987-63643589997888880898740686-4898078779976899
No 21
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=99.95 E-value=2.7e-27 Score=208.52 Aligned_cols=208 Identities=15% Similarity=0.143 Sum_probs=149.7
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 15666199999987999984438999999875332100124530188999999987543302785555410000123354
Q gi|254780605|r 308 CLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHA 387 (609)
Q Consensus 308 ~~lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~ 387 (609)
..+|++|++.||+.||+|-.. ..+.+.++...+.+|+||+|+++.++++.++.+.. ..+.+.+|||+++ .|.
T Consensus 36 ~~~~~~~~~d~i~~~r~A~~I----~~~~~~~~~~~ikpG~t~~el~~~ie~~i~~~~~~--~~~~g~aFP~~is--vN~ 107 (360)
T 2nw5_A 36 MEIENFTESDILQDARRAAEA----HRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKG--ERNNGIGFPAGMS--MNS 107 (360)
T ss_dssp CEECCCCCCHHHHHHHHHHHH----HHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTT--SGGGGEEEEEEEE--ETT
T ss_pred HHHHCCCCHHHHHHHHHHHHH----HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC--CCCCCCCCCEEEE--ECC
T ss_conf 665505889999999999999----99999999976779994999999999999984687--7666888881677--678
Q ss_pred CCCCCCCCC-CCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 322224554-3320503898799830320105612221432103788888433366778888899721789788889999
Q gi|254780605|r 388 AIIHYQATV-QSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDS 466 (609)
Q Consensus 388 AipHY~~~~-~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~ 466 (609)
.+.||.|.+ .+++.|++||+++||.|++|.||++|+||||++|++.++..++ +..+..+...+.. +|++..++..
T Consensus 108 ~v~H~~P~~~~~~~~lk~GDlV~ID~G~~~dGY~sD~trT~~vg~~~~~~~~~---~~~a~~aa~~~~~-~g~~~~~ig~ 183 (360)
T 2nw5_A 108 CAAHYTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKENLEPLLVA---AREGTETGIKSLG-VDVRVCDIGR 183 (360)
T ss_dssp EEECCCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCGGGHHHHHH---HHHHHHHHHHHCC-TTCBHHHHHH
T ss_pred EEEECCCCCCCCCCCCCCCCEEEEECCEEECCEEEEEEEEEEECCCCHHHHHH---HHHHHHHHHHHHC-CCCEECCCCH
T ss_conf 87726888886554534899899951508998985323687613332067889---9999999998653-4854124334
Q ss_pred HHHHHHHHCCCC----------CCCCCCCCCCCCCCCCCCCC--CCCCCCCCEECCCCEEEECCCEEECCCCCEE
Q ss_conf 873667741865----------47764323211356077886--2377898600569878846860356875215
Q gi|254780605|r 467 IARIFLWKYGAD----------FAHGVGHGVGSFLPVHEGPQ--GISRTNQEPLLPGMILSNEPGYYRCGAFGIR 529 (609)
Q Consensus 467 ~aR~~l~~~g~d----------y~HgtGHGVG~~l~VHE~P~--~is~~~~~~l~~Gmv~s~EPG~Y~~g~~GiR 529 (609)
.++....+.+.+ +.+-+|||+|+++ +|+.|. .++......|+||||+|+||-+. .|.+-++
T Consensus 184 ~i~~v~~~~~~~~~~~~~~~~~v~~~~gHgiG~~~-~~~~~~ip~~~~~~~~~le~GmV~tIEp~~s-~g~g~i~ 256 (360)
T 2nw5_A 184 DINEVISSYEVEIGGRMWPIRPISDLHGHSISQFR-IHGGISIPAVNNRDTTRIKGDSFYAVETFAT-TGKGSID 256 (360)
T ss_dssp HHHHHHTTCEEECSSSEEECEECTTCCEEEEBTTB-SCCSCEECSSCCCCCCBCCSSEEEEEEEEEE-SSCSCCE
T ss_pred HHEEEHHHCCEECCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCEEECCEEEEEEEECC-CCCCEEE
T ss_conf 11010121011013330210100364355556520-2378875753689988896362887653304-7884478
No 22
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=99.94 E-value=1.9e-25 Score=195.65 Aligned_cols=206 Identities=17% Similarity=0.192 Sum_probs=152.1
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66619999998799998443899999987533210012453018899999998754330278555541000012335432
Q gi|254780605|r 310 LRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAI 389 (609)
Q Consensus 310 lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~Ai 389 (609)
.+-.+|+.||+.||+|-.. ..+.+.++...+..|+|++|+++.++.+-++.+.. .....+++|||.++ .|..+
T Consensus 157 ~~~~~~ed~l~~~RkAaeI----~~~vl~~~~~~IKPGmt~~EI~e~iE~~ir~~~~~-~g~~~GiaFPt~iS--vN~~a 229 (478)
T 1b6a_A 157 ALDQASEEIWNDFREAAEA----HRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKE-NGLNAGLAFPTGCS--LNNCA 229 (478)
T ss_dssp HHHHHTHHHHHHHHHHHHH----HHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTC-BTTTEEEEEEEEEE--ETTEE
T ss_pred HHHHCCHHHHHHHHHHHHH----HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC-CCCCCCCCCCEEEE--CCCEE
T ss_conf 5432699999999999999----99999999976779997999999999999986576-77655788772753--36775
Q ss_pred CCCCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 22245543320503898799830320105612221432103788888433366778888899721789788889999873
Q gi|254780605|r 390 IHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIAR 469 (609)
Q Consensus 390 pHY~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR 469 (609)
.||.|++..+++|+.||+++||.|++|.||++|+||||++|...+ +.+..|..+.-+...+.. +|++..++...++
T Consensus 230 aHytP~~~d~~vLk~GDvVkID~Gv~idGYisD~ArTv~VG~~~~---~L~~av~eAl~aaIkaak-pGvr~~dIg~aI~ 305 (478)
T 1b6a_A 230 AHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFNPKYD---TLLKAVKDATNTGIKCAG-IDVRLCDVGEAIQ 305 (478)
T ss_dssp ECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSSGGGH---HHHHHHHHHHHHHHHHCC-TTCBHHHHHHHHH
T ss_pred ECCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEEEEEECCCHHH---HHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHH
T ss_conf 557888877714679998999860798999876667885260133---689999999999998642-6982767789999
Q ss_pred HHHHHCCC-----CC-----CCCCCCCCCCCCCCCCCCCCC---CCCCCCEECCCCEEEECCCEEECCCCCEE
Q ss_conf 66774186-----54-----776432321135607788623---77898600569878846860356875215
Q gi|254780605|r 470 IFLWKYGA-----DF-----AHGVGHGVGSFLPVHEGPQGI---SRTNQEPLLPGMILSNEPGYYRCGAFGIR 529 (609)
Q Consensus 470 ~~l~~~g~-----dy-----~HgtGHGVG~~l~VHE~P~~i---s~~~~~~l~~Gmv~s~EPG~Y~~g~~GiR 529 (609)
.++...++ .| .+-+|||||.| .+|++| .| .......|++|||++||| +--.|.+-||
T Consensus 306 ev~es~~~ei~~k~yg~k~I~nl~GHgIG~~-~ih~~k-~Ip~~k~~~~~kLeeGmVfAIEP-f~StG~G~v~ 375 (478)
T 1b6a_A 306 EVMESYEVEIDGKTYQVKPIRNLNGHSIGQY-RIHAGK-TVPIVKGGEATRMEEGEVYAIET-FGSTGKGVVH 375 (478)
T ss_dssp HHHHTCEEEETTEEEECEECTTCEEEEEBTT-BSCCSC-EEESSSSCCCCBCCTTCEEEEEE-EEESSCSCCE
T ss_pred HHHHHHCCEECCCCCCCEEECCCCEEEECCC-CCCCCC-CCCCCCCCCCCEECCCCEEEEEE-EEECCCCEEE
T ss_conf 9999706451232248615457202442120-214897-36865788898906998899975-6777987176
No 23
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=99.72 E-value=3.9e-17 Score=137.81 Aligned_cols=124 Identities=19% Similarity=0.268 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCHHHHHHCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHCCCC
Q ss_conf 58999999999997499799960888747860667106100441467650077895783679978814899998619671
Q gi|254780605|r 14 TFERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTGSAGIAIVLRQKSVIFVDGRYTLQVEKEVDTAL 93 (609)
Q Consensus 14 ~~erL~~LR~~m~~~~idayiip~~D~h~sEyv~~~~~rl~~isGFtGSaG~aiIt~~~a~L~tDgRY~lQA~~el~~~~ 93 (609)
-.+|++++|+.|+++|+||++|.+ .+.+.|+|||+||.|+++|+.+++.||||+||..||+.|+....
T Consensus 8 ~~~Ri~~l~~~m~~~~iDa~lit~------------~~ni~Yltgf~~~~~~lli~~~~~~li~~~r~~~~a~~~~~~~~ 75 (132)
T 3ovk_A 8 LEQRLGHCLRQMAEKGLEALLVTH------------LTNSYYLTGFSGTAATVLITAKRRVLITDSRYTLLAKASVEGFD 75 (132)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECS------------HHHHHHHHCCCCSCCEEEEESSCEEEEECTTTHHHHHHHCTTCE
T ss_pred HHHHHHHHHHHHHHCCCCEEEECC------------HHHCCHHHCCCCCCEEEEEECCCCEEEEECHHHHHHHHHCCCEE
T ss_conf 999999999999986999999877------------88800311467734699994798746871455899995579808
Q ss_pred EEEEECCCCCHHHHHHHHCCCCCEEEECCEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHH
Q ss_conf 79986689999998887437998899656341399999999985334761997050011122
Q gi|254780605|r 94 FTIKNIAIEPLHAWISEHGFVGLRLGLDSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDSL 155 (609)
Q Consensus 94 ~~~~~~~~~~~~~wl~~~~~~g~~IG~Dp~l~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~i 155 (609)
+.....+...+.++|.+. ...+||+|+. +|+..++.|++.+. ++++++.+ ++|+++
T Consensus 76 i~~~~~~~~~l~~~l~~~--~~~~IgiE~~-~s~~~~~~L~~~l~--~~~~v~~~-~ii~~l 131 (132)
T 3ovk_A 76 IIESRTPLKVVAELLEAD--QIDCLGFEDQ-VSFSFYQAMQAELS--GITLLAQS-GFVEHL 131 (132)
T ss_dssp EEECSCHHHHHHHHHHHH--TCCEEEEETT-SBHHHHHHHHHHCT--TCEEEEES-STTGGG
T ss_pred EEECCCHHHHHHHHHHHC--CCCEEEECCC-CCHHHHHHHHHHCC--CCEEEECH-HHHHHH
T ss_conf 997799899999999737--8987998795-18999999996689--99899875-989974
No 24
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics, PSI, MCSG, protein structure initiative; HET: GOL; 2.20A {Streptococcus thermophilus lmg 18311}
Probab=99.62 E-value=2.8e-15 Score=124.93 Aligned_cols=122 Identities=19% Similarity=0.303 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCHHHHHHCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHCCCC
Q ss_conf 58999999999997499799960888747860667106100441467650077895783679978814899998619671
Q gi|254780605|r 14 TFERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTGSAGIAIVLRQKSVIFVDGRYTLQVEKEVDTAL 93 (609)
Q Consensus 14 ~~erL~~LR~~m~~~~idayiip~~D~h~sEyv~~~~~rl~~isGFtGSaG~aiIt~~~a~L~tDgRY~lQA~~el~~~~ 93 (609)
..+|+++||+.|+++|+||+||.+. ..+.|+|||+||.|.++|+.+++.||||+||..||++|+...
T Consensus 4 ~~~Ri~~lr~~m~~~~lD~~li~~~------------~ni~Yltg~~~~~~~lli~~~~~~l~~~~r~~~~a~~~~~~~- 70 (131)
T 3il0_A 4 MQRRLERFDAKLVQSGLDALLVTGQ------------NNIYYLTDFWGTNATVFITKNRRLFLTDSRYTLIAKQSVHGF- 70 (131)
T ss_dssp GGGHHHHHHHHHHHHTCSEEEECSH------------HHHHHHHSCCCSSEEEEEESSCEEEEECTTSHHHHHHHCCSS-
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCH------------HHHHHHHCEECCCEEEEEECCCCEEEEECHHHHHHHHHCCCC-
T ss_conf 9999999999999869999998678------------982343320425779999689867998414679999757972-
Q ss_pred EEEEECC--CCCHHHHHHHHCCCCCEEEECCEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHH
Q ss_conf 7998668--9999998887437998899656341399999999985334761997050011122
Q gi|254780605|r 94 FTIKNIA--IEPLHAWISEHGFVGLRLGLDSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDSL 155 (609)
Q Consensus 94 ~~~~~~~--~~~~~~wl~~~~~~g~~IG~Dp~l~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~i 155 (609)
.+.... ...+.+++++. .+.+||+++. +|...+..|++.+.+ +.+++.+ ++|+.+
T Consensus 71 -~v~~~~~~~~~~~~~l~~~--~~~~igie~~-~~~~~~~~l~~~l~~--~~~v~~~-~~i~~l 127 (131)
T 3il0_A 71 -DIIESKDPLKDIVKFVEVD--KLETIGFDNQ-VSFAYYQALQAIFEG--YTLSPQT-NFMEEL 127 (131)
T ss_dssp -EEEECSCHHHHHHHHHHHT--TCCEEEEETT-SCHHHHHHHHHHTTT--SEEEEES-SHHHHH
T ss_pred -EEEECCCHHHHHHHHHHHC--CCCEEEECCC-CCHHHHHHHHHHCCC--CEEEECH-HHHHHH
T ss_conf -8998088699999999867--9998999897-879999999954899--9999978-999997
No 25
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=99.37 E-value=7.2e-12 Score=101.12 Aligned_cols=122 Identities=13% Similarity=0.132 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCHHHHHHCCCCCCE----EEEEECC-CCEEEECCHHHHHHHHHH
Q ss_conf 89999999999974997999608887478606671061004414676500----7789578-367997881489999861
Q gi|254780605|r 15 FERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTGSAG----IAIVLRQ-KSVIFVDGRYTLQVEKEV 89 (609)
Q Consensus 15 ~erL~~LR~~m~~~~idayiip~~D~h~sEyv~~~~~rl~~isGFtGSaG----~aiIt~~-~a~L~tDgRY~lQA~~el 89 (609)
-.||++||+.|+++|+|+++|.+. .-+.|+|||+|+.+ .++|+.+ ++.|+||+||..||+++.
T Consensus 2 ~~Rl~rlr~~m~~~~lD~~li~~~------------~ni~YltGf~~~~~~r~~~lii~~~g~~~l~~~~~~~~~a~~~~ 69 (132)
T 3o5v_A 2 NAKLDQIRLYLDQKGAELAIFSDP------------VTINYLTGFFCDPHERQLFLFVYHDLAPVLFVPALEVARASQAI 69 (132)
T ss_dssp CHHHHHHHHHHHHTTCCEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCCEEEECCH------------HHHCCCCCCCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHCC
T ss_conf 689999999999869999999054------------13023028676764323788975799579995666489998306
Q ss_pred CCCCEEEEECCCCCHHHHHHHHCC--CCCEEEECCEECCHHHHHHHHHHHHHCCCEEEECCCHHHHH
Q ss_conf 967179986689999998887437--99889965634139999999998533476199705001112
Q gi|254780605|r 90 DTALFTIKNIAIEPLHAWISEHGF--VGLRLGLDSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDS 154 (609)
Q Consensus 90 ~~~~~~~~~~~~~~~~~wl~~~~~--~g~~IG~Dp~l~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~ 154 (609)
+..... ... ...+.+.+.+.+. .+.+||+|...+|+..++.|++.+ +..++.++ ++|++
T Consensus 70 ~~~i~~-~~d-~~~~~~~l~~~l~~~~~~~igie~~~~~~~~~~~L~~~~---~~~~vd~~-~~i~~ 130 (132)
T 3o5v_A 70 SFPVFG-YVD-SENPWEKIKAVLPNTAAKTIYAEFDHLNVNKFHGLQTIF---SGQFNNLT-PYVQG 130 (132)
T ss_dssp CSCEEE-ECT-TSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHTTC---CSEEEECH-HHHHT
T ss_pred CCCCEE-ECC-CCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHC---CCEEEEHH-HHHHH
T ss_conf 887465-316-546789999999744797699951886999999999766---99385868-99998
No 26
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae}
Probab=99.36 E-value=1.9e-11 Score=98.14 Aligned_cols=121 Identities=12% Similarity=0.124 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCHHHHHHCCCCCC-----EEEEEECCCCEEEECCHHHHHHHHHHC
Q ss_conf 999999999997499799960888747860667106100441467650-----077895783679978814899998619
Q gi|254780605|r 16 ERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTGSA-----GIAIVLRQKSVIFVDGRYTLQVEKEVD 90 (609)
Q Consensus 16 erL~~LR~~m~~~~idayiip~~D~h~sEyv~~~~~rl~~isGFtGSa-----G~aiIt~~~a~L~tDgRY~lQA~~el~ 90 (609)
.||++||+.|+++++||+||.+. .-+.|+|||+|+. +.+|...+++.|+||+||..||+++..
T Consensus 3 ~Rl~klr~~m~~~~ld~~lit~~------------~ni~YlTGf~~~~~er~~~l~i~~~~~~~li~~~~~~~~a~~~~~ 70 (132)
T 3ooo_A 3 SKLNRIRHHLHSVQAELAVFSDP------------VTVNYLTGFFCDPHERQMFLFVYEDRDPILFVPALEVSRAKQSVP 70 (132)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHHHHCS
T ss_pred HHHHHHHHHHHHCCCCEEEEECC------------CHHHHHCCCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHCCC
T ss_conf 39999999999869999999253------------132474086678764316778768997689724776888874579
Q ss_pred CCCEEEEECCCCCHHHHHHHHCCC--CCEEEECCEECCHHHHHHHHHHHHHCCCEEEECCCHHHHH
Q ss_conf 671799866899999988874379--9889965634139999999998533476199705001112
Q gi|254780605|r 91 TALFTIKNIAIEPLHAWISEHGFV--GLRLGLDSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDS 154 (609)
Q Consensus 91 ~~~~~~~~~~~~~~~~wl~~~~~~--g~~IG~Dp~l~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~ 154 (609)
..... .. ....+.+.+++.+.. ..+||+|...+|+..++.|++.+ +..++..+ ++|+.
T Consensus 71 ~~i~~-~~-d~~~~~~~l~~~l~~~~~~~igie~~~~t~~~~~~L~~~~---~~~~~d~~-~~i~~ 130 (132)
T 3ooo_A 71 FPVFG-YI-DSENPWQKIASNLPSFSVSKVLAEFDNLNVTKFQGLQTVF---DGHFENLT-PYIQN 130 (132)
T ss_dssp SCEEE-EC-TTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHHHC---CSEEEECC-HHHHT
T ss_pred CCEEE-EE-CCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHC---CCEEEEHH-HHHHH
T ss_conf 76899-80-4768789999999747997599911866999999998627---99597819-99998
No 27
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metallo peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis atcc 367}
Probab=99.22 E-value=7.6e-11 Score=93.99 Aligned_cols=113 Identities=7% Similarity=0.083 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCHHHHHHCCCCCC----EEEEEEC-CCCEEEECCHHHHHHHHHHC
Q ss_conf 999999999997499799960888747860667106100441467650----0778957-83679978814899998619
Q gi|254780605|r 16 ERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTGSA----GIAIVLR-QKSVIFVDGRYTLQVEKEVD 90 (609)
Q Consensus 16 erL~~LR~~m~~~~idayiip~~D~h~sEyv~~~~~rl~~isGFtGSa----G~aiIt~-~~a~L~tDgRY~lQA~~el~ 90 (609)
+||++||+.|+++++||++|.+. .-+.|+|||+|+. ..++|+. .++.|+|++||..||+++..
T Consensus 4 ~Rl~kl~~~m~~~~lD~~li~~~------------~ni~YlTG~~~~~~~r~~~l~i~~~~~~~li~~~~~~~~a~~~~~ 71 (140)
T 3i7m_A 4 TKLEQIQQWTAQHHASMTYLSNP------------KTIEYLTGFGSDPIERVLALVVFPDQDPFIFAPALEVEVIKETGW 71 (140)
T ss_dssp CHHHHHHHHHHHTTCSEEEECCH------------HHHHHHHCCCCCCCSSCCEEEECSSSCCEEEEEGGGHHHHHTTTC
T ss_pred HHHHHHHHHHHHCCCCEEEECCH------------HHCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHCCC
T ss_conf 99999999999869999998464------------020112375666644337888778990899988411677986377
Q ss_pred -CCCEEEEECCC--CCHHHHHHHHCCCCCEEEECCEECCHHHHHHHHHHHHHC
Q ss_conf -67179986689--999998887437998899656341399999999985334
Q gi|254780605|r 91 -TALFTIKNIAI--EPLHAWISEHGFVGLRLGLDSRLHSSFEVDLLQKSLDKI 140 (609)
Q Consensus 91 -~~~~~~~~~~~--~~~~~wl~~~~~~g~~IG~Dp~l~s~~~~~~l~~~l~~~ 140 (609)
.......+... ..+.+.|.+....+.+||++..-+|+..++.|++.+...
T Consensus 72 ~~~i~~~~d~~~~~~~~~~~l~~~~~~~~~IGiE~~~l~~~~~~~l~~~l~~~ 124 (140)
T 3i7m_A 72 QFPVIGYLDHENPWAMIADQVKQRHVNPEHVAIEKGQLQVARMEALAAQFSAP 124 (140)
T ss_dssp CSCEEEECTTSCHHHHHHHHHHHTTCCCSEEEECTTTSCHHHHHHHHTTSSSC
T ss_pred CCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 65301121455766789999998377675799975975899999999868998
No 28
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics, PSI, MCSG, protein structure initiative; HET: GOL; 2.20A {Streptococcus thermophilus lmg 18311}
Probab=99.16 E-value=7.2e-11 Score=94.16 Aligned_cols=125 Identities=13% Similarity=0.165 Sum_probs=91.0
Q ss_pred CCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCCC
Q ss_conf 77388999999860233430676028420234432013553778700233220147862000353112156787412563
Q gi|254780605|r 177 RESQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKALLSAVA 256 (609)
Q Consensus 177 ~s~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~k~~~~~~~~l~~~~ 256 (609)
...++|++++|+.|+++|+|+++|++++||.||+|++|+. ++++|+.+ ++.||++.++... .+.......
T Consensus 2 ~e~~~Ri~~lr~~m~~~~lD~~li~~~~ni~Yltg~~~~~--------~~lli~~~-~~~l~~~~r~~~~-a~~~~~~~~ 71 (131)
T 3il0_A 2 NAMQRRLERFDAKLVQSGLDALLVTGQNNIYYLTDFWGTN--------ATVFITKN-RRLFLTDSRYTLI-AKQSVHGFD 71 (131)
T ss_dssp CCGGGHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCSS--------EEEEEESS-CEEEEECTTSHHH-HHHHCCSSE
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCEECCC--------EEEEEECC-CCEEEEECHHHHH-HHHHCCCCE
T ss_conf 4799999999999998699999986789823433204257--------79999689-8679984146799-997579728
Q ss_pred EEECH---HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CCEEECCCCCCHHHHHCC
Q ss_conf 57074---45157786301357428972531778897531213--956751543211566619
Q gi|254780605|r 257 IVLDM---DMMDSRLVCLARTSMPILIDPKWISYRFFKVIAQK--NGVMVEGSDPSCLLRATK 314 (609)
Q Consensus 257 ~~~~~---~~~~~~l~~l~~~~~~i~id~~~~s~~~~~~l~~~--~~~~i~~~~pI~~lRaiK 314 (609)
+.... ..+...+... +..++++++ ..++..+..+.+. +..++...+++..+|+||
T Consensus 72 v~~~~~~~~~~~~~l~~~--~~~~igie~-~~~~~~~~~l~~~l~~~~~v~~~~~i~~lR~iK 131 (131)
T 3il0_A 72 IIESKDPLKDIVKFVEVD--KLETIGFDN-QVSFAYYQALQAIFEGYTLSPQTNFMEELRMIK 131 (131)
T ss_dssp EEECSCHHHHHHHHHHHT--TCCEEEEET-TSCHHHHHHHHHHTTTSEEEEESSHHHHHHC--
T ss_pred EEECCCHHHHHHHHHHHC--CCCEEEECC-CCCHHHHHHHHHHCCCCEEEECHHHHHHHHCCC
T ss_conf 998088699999999867--999899989-787999999995489999999789999974779
No 29
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae}
Probab=99.15 E-value=8.1e-11 Score=93.80 Aligned_cols=127 Identities=12% Similarity=0.101 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCCC-EE
Q ss_conf 88999999860233430676028420234432013553778700233220147862000353112156787412563-57
Q gi|254780605|r 180 QEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKALLSAVA-IV 258 (609)
Q Consensus 180 ~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~k~~~~~~~~l~~~~-~~ 258 (609)
-+||+++|+.|+++++|+++||+++||.||++++|.... .| ..++|..+++++|+++..+... ++....... .+
T Consensus 2 m~Rl~klr~~m~~~~ld~~lit~~~ni~YlTGf~~~~~e-r~---~~l~i~~~~~~~li~~~~~~~~-a~~~~~~~i~~~ 76 (132)
T 3ooo_A 2 MSKLNRIRHHLHSVQAELAVFSDPVTVNYLTGFFCDPHE-RQ---MFLFVYEDRDPILFVPALEVSR-AKQSVPFPVFGY 76 (132)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECCHHHHHHHHSCCCCCTT-SC---CEEEEESSSCCEEEEEGGGHHH-HHHHCSSCEEEE
T ss_pred CHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCC-CE---EEEEECCCCCEEEECCHHHHHH-HHHCCCCCEEEE
T ss_conf 739999999999869999999253132474086678764-31---6778768997689724776888-874579768998
Q ss_pred ECHHHHHHHHHHCCC--CCCEEEECCCCCCHHHHHHHHHC-CCEEECCCCCCHHHH
Q ss_conf 074451577863013--57428972531778897531213-956751543211566
Q gi|254780605|r 259 LDMDMMDSRLVCLAR--TSMPILIDPKWISYRFFKVIAQK-NGVMVEGSDPSCLLR 311 (609)
Q Consensus 259 ~~~~~~~~~l~~l~~--~~~~i~id~~~~s~~~~~~l~~~-~~~~i~~~~pI~~lR 311 (609)
.+.+.....+..... ...+|++|.+.+++..++.+++. +..++.....|..||
T Consensus 77 ~d~~~~~~~l~~~l~~~~~~~igie~~~~t~~~~~~L~~~~~~~~~d~~~~i~~lR 132 (132)
T 3ooo_A 77 IDSENPWQKIASNLPSFSVSKVLAEFDNLNVTKFQGLQTVFDGHFENLTPYIQNMR 132 (132)
T ss_dssp CTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHHHCCSEEEECCHHHHTTC
T ss_pred ECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEHHHHHHHHC
T ss_conf 04768789999999747997599911866999999998627995978199999859
No 30
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=99.12 E-value=1e-10 Score=93.09 Aligned_cols=127 Identities=13% Similarity=0.109 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCCCE-E
Q ss_conf 889999998602334306760284202344320135537787002332201478620003531121567874125635-7
Q gi|254780605|r 180 QEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKALLSAVAI-V 258 (609)
Q Consensus 180 ~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~k~~~~~~~~l~~~~~-~ 258 (609)
..||++||+.|+++|+|+++|++++|+.||+++++.... . .+.++|+.+++++|+++..+.. .++.......+ +
T Consensus 2 ~~Rl~rlr~~m~~~~lD~~li~~~~ni~YltGf~~~~~~-r---~~~lii~~~g~~~l~~~~~~~~-~a~~~~~~~i~~~ 76 (132)
T 3o5v_A 2 NAKLDQIRLYLDQKGAELAIFSDPVTINYLTGFFCDPHE-R---QLFLFVYHDLAPVLFVPALEVA-RASQAISFPVFGY 76 (132)
T ss_dssp CHHHHHHHHHHHHTTCCEEEECCHHHHHHHHSCCCCCTT-S---CCEEEEESSSCCEEEEEGGGHH-HHHHHCCSCEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCCC-C---EEEEEECCCCCEEEEECHHHHH-HHHHCCCCCCEEE
T ss_conf 689999999999869999999054130230286767643-2---3788975799579995666489-9983068874653
Q ss_pred ECHHHHHHHHHHCCC--CCCEEEECCCCCCHHHHHHHHHC-CCEEECCCCCCHHHH
Q ss_conf 074451577863013--57428972531778897531213-956751543211566
Q gi|254780605|r 259 LDMDMMDSRLVCLAR--TSMPILIDPKWISYRFFKVIAQK-NGVMVEGSDPSCLLR 311 (609)
Q Consensus 259 ~~~~~~~~~l~~l~~--~~~~i~id~~~~s~~~~~~l~~~-~~~~i~~~~pI~~lR 311 (609)
.+.+.....+..... ..++|++|.+.+++..++.+++. +..++.....|..||
T Consensus 77 ~d~~~~~~~l~~~l~~~~~~~igie~~~~~~~~~~~L~~~~~~~~vd~~~~i~~lR 132 (132)
T 3o5v_A 77 VDSENPWEKIKAVLPNTAAKTIYAEFDHLNVNKFHGLQTIFSGQFNNLTPYVQGMR 132 (132)
T ss_dssp CTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHTTCCSEEEECHHHHHTC-
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEHHHHHHHHC
T ss_conf 16546789999999744797699951886999999999766993858689999859
No 31
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metallo peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis atcc 367}
Probab=99.11 E-value=1.5e-10 Score=91.92 Aligned_cols=130 Identities=12% Similarity=0.142 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCCCE-
Q ss_conf 3889999998602334306760284202344320135537787002332201478620003531121567874125635-
Q gi|254780605|r 179 SQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKALLSAVAI- 257 (609)
Q Consensus 179 ~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~k~~~~~~~~l~~~~~- 257 (609)
+.+||+++|+.|+++++|+++||+++|+.||+++.++... .| ..++|+.+++++|+++........+.......+
T Consensus 2 y~~Rl~kl~~~m~~~~lD~~li~~~~ni~YlTG~~~~~~~-r~---~~l~i~~~~~~~li~~~~~~~~a~~~~~~~~i~~ 77 (140)
T 3i7m_A 2 HMTKLEQIQQWTAQHHASMTYLSNPKTIEYLTGFGSDPIE-RV---LALVVFPDQDPFIFAPALEVEVIKETGWQFPVIG 77 (140)
T ss_dssp --CHHHHHHHHHHHTTCSEEEECCHHHHHHHHCCCCCCCS-SC---CEEEECSSSCCEEEEEGGGHHHHHTTTCCSCEEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCCCC-CE---EEEEECCCCCEEEEECCCCHHHHHHCCCCCCCEE
T ss_conf 6799999999999869999998464020112375666644-33---7888778990899988411677986377653011
Q ss_pred EEC----HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CCEE-ECCCCCCHHHHH
Q ss_conf 707----445157786301357428972531778897531213--9567-515432115666
Q gi|254780605|r 258 VLD----MDMMDSRLVCLARTSMPILIDPKWISYRFFKVIAQK--NGVM-VEGSDPSCLLRA 312 (609)
Q Consensus 258 ~~~----~~~~~~~l~~l~~~~~~i~id~~~~s~~~~~~l~~~--~~~~-i~~~~pI~~lRa 312 (609)
+.+ ++.+...+........+|++|.+.+++..++.+++. ...+ ++....|..|||
T Consensus 78 ~~d~~~~~~~~~~~l~~~~~~~~~IGiE~~~l~~~~~~~l~~~l~~~~~~vd~~~~i~~lRa 139 (140)
T 3i7m_A 78 YLDHENPWAMIADQVKQRHVNPEHVAIEKGQLQVARMEALAAQFSAPSFDLDITSFIEHMRG 139 (140)
T ss_dssp ECTTSCHHHHHHHHHHHTTCCCSEEEECTTTSCHHHHHHHHTTSSSCEEEEECHHHHHHC--
T ss_pred ECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHC
T ss_conf 21455766789999998377675799975975899999999868998562544999999868
No 32
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=99.02 E-value=2.2e-09 Score=83.84 Aligned_cols=128 Identities=20% Similarity=0.313 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCHHHHHHCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHCCCCEE
Q ss_conf 99999999999749979996088874786066710610044146765007789578367997881489999861967179
Q gi|254780605|r 16 ERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTGSAGIAIVLRQKSVIFVDGRYTLQVEKEVDTALFT 95 (609)
Q Consensus 16 erL~~LR~~m~~~~idayiip~~D~h~sEyv~~~~~rl~~isGFtGSaG~aiIt~~~a~L~tDgRY~lQA~~el~~~~~~ 95 (609)
+|+++||+.|+++++||+||.+ ++..-|. -..|+|||+++++.+|++.+++.+++++++..||+.+.+.....
T Consensus 2 ~R~~rl~~~m~~~~iDa~ll~~--~~n~~~~-----~~~~~tg~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (359)
T 2zsg_A 2 DRSERLIQLISEEGIDAFLIMN--IENSARA-----SSVYFSGFTGSFSIILISENTRLLITDSRYTVQAKQETDFEVRE 74 (359)
T ss_dssp CCHHHHHHHHHTTTCCEEEEEE--STTTTHH-----HHHHHHCCCSSCEEEEEETTEEEEEECTTTHHHHHHHCCSEEEE
T ss_pred CHHHHHHHHHHHCCCCEEEEEC--HHHHHHH-----HCCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHCCCCEEE
T ss_conf 3899999999877999999906--0564032-----27323698746689999599379998873479997525983799
Q ss_pred EEECCC-CCHHHHHHHHCCCCCEEEECCEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHH
Q ss_conf 986689-999998887437998899656341399999999985334761997050011122
Q gi|254780605|r 96 IKNIAI-EPLHAWISEHGFVGLRLGLDSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDSL 155 (609)
Q Consensus 96 ~~~~~~-~~~~~wl~~~~~~g~~IG~Dp~l~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~i 155 (609)
+..... ..+.+++.+. ...+||+|+..++...++.+++.+.. ..++... ++++.+
T Consensus 75 ~~~~~~~~~l~~~l~~~--~~~~igv~~~~~~~~~~~~l~~~l~~--~~~vd~~-~~~~~~ 130 (359)
T 2zsg_A 75 VKGGDFIDVLKKTVNDL--KIKTIALEEERVSLSLFRRISSAFGD--RKFIGID-DEVKQM 130 (359)
T ss_dssp C---CCHHHHHHHHHHT--TCCEEEECGGGSBHHHHHHHHHHTTT--CEEEECH-HHHHHH
T ss_pred EECCCHHHHHHHHHHHH--CCCEEEEEECCCCHHHHHHHHCCCCC--CEEECCC-HHHHHH
T ss_conf 61489899999998760--47649984132548999776322898--4684171-699997
No 33
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=99.02 E-value=9.3e-10 Score=86.45 Aligned_cols=119 Identities=13% Similarity=0.209 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCCCEE
Q ss_conf 38899999986023343067602842023443201355377870023322014786200035311215678741256357
Q gi|254780605|r 179 SQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKALLSAVAIV 258 (609)
Q Consensus 179 ~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~k~~~~~~~~l~~~~~~ 258 (609)
.++|++++|+.|+++|+|+++||+++||.||+++.|+. ++++|+.+ +..|++|.++.. +.+.......+.
T Consensus 8 ~~~Ri~~l~~~m~~~~iDa~lit~~~ni~Yltgf~~~~--------~~lli~~~-~~~li~~~r~~~-~a~~~~~~~~i~ 77 (132)
T 3ovk_A 8 LEQRLGHCLRQMAEKGLEALLVTHLTNSYYLTGFSGTA--------ATVLITAK-RRVLITDSRYTL-LAKASVEGFDII 77 (132)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECSHHHHHHHHCCCCSC--------CEEEEESS-CEEEEECTTTHH-HHHHHCTTCEEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCHHHCCHHHCCCCCC--------EEEEEECC-CCEEEEECHHHH-HHHHHCCCEEEE
T ss_conf 99999999999998699999987788800311467734--------69999479-874687145589-999557980899
Q ss_pred ECHHH----HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CCEEECCCCCCHHHH
Q ss_conf 07445----157786301357428972531778897531213--956751543211566
Q gi|254780605|r 259 LDMDM----MDSRLVCLARTSMPILIDPKWISYRFFKVIAQK--NGVMVEGSDPSCLLR 311 (609)
Q Consensus 259 ~~~~~----~~~~l~~l~~~~~~i~id~~~~s~~~~~~l~~~--~~~~i~~~~pI~~lR 311 (609)
.+.. +...+... ...+|++|+ ++++..++.+.+. +..++...+.|..||
T Consensus 78 -~~~~~~~~l~~~l~~~--~~~~IgiE~-~~s~~~~~~L~~~l~~~~~v~~~~ii~~lR 132 (132)
T 3ovk_A 78 -ESRTPLKVVAELLEAD--QIDCLGFED-QVSFSFYQAMQAELSGITLLAQSGFVEHLR 132 (132)
T ss_dssp -ECSCHHHHHHHHHHHH--TCCEEEEET-TSBHHHHHHHHHHCTTCEEEEESSTTGGGC
T ss_pred -ECCCHHHHHHHHHHHC--CCCEEEECC-CCCHHHHHHHHHHCCCCEEEECHHHHHHHC
T ss_conf -7799899999999737--898799879-518999999996689998998759899749
No 34
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=98.81 E-value=2.1e-08 Score=77.05 Aligned_cols=125 Identities=15% Similarity=0.247 Sum_probs=87.2
Q ss_pred CCCHHHHHHHHHHHHCC-----CCCEEEEECCCCC------------HHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEE
Q ss_conf 87738899999986023-----3430676028420------------234432013553778700233220147862000
Q gi|254780605|r 176 GRESQEKIRDICKILHQ-----KEVGAVFICDPSS------------IAWIFNIRGFDIPCSPYPLSRAILYADGKAEIF 238 (609)
Q Consensus 176 G~s~~eKi~~ir~~L~~-----~~~daliit~~d~------------IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lf 238 (609)
...+.+||++||+.|++ +++||++|.+-|. .+||+|+-|| .+.|+|+.+ ++.||
T Consensus 3 ~~~~~~~l~~lr~~m~~~~~~~~~id~yivp~~D~h~sEy~~~~~~r~~~lsgFtGS--------aG~avit~~-~a~l~ 73 (623)
T 3ctz_A 3 PKVTSELLRQLRQAMRNSEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGS--------AGTAIITEE-HAAMW 73 (623)
T ss_dssp CBCCHHHHHHHHHHTTCTTTCSSCCSEEEECSCCTTCCSSCCGGGCHHHHHHSCCSS--------CCEEEEESS-CEEEE
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHCCCHHCCCCCCH--------HHHHHHHCC-EEEEE
T ss_conf 861899999999998734666678059996898887780474020304140199846--------551763288-75999
Q ss_pred CCCCCCCHHHHHHHCCCCEEECHH-----HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHH----HCCCEEECC-CCCCH
Q ss_conf 353112156787412563570744-----51577863013574289725317788975312----139567515-43211
Q gi|254780605|r 239 FDKQYINEQLKALLSAVAIVLDMD-----MMDSRLVCLARTSMPILIDPKWISYRFFKVIA----QKNGVMVEG-SDPSC 308 (609)
Q Consensus 239 vd~~k~~~~~~~~l~~~~~~~~~~-----~~~~~l~~l~~~~~~i~id~~~~s~~~~~~l~----~~~~~~i~~-~~pI~ 308 (609)
+|.||.-+ ++..++....+.... ...+.+......+.+|++||...|+..++.+. +.+..++.. .++|.
T Consensus 74 tDgRY~~Q-A~~q~~~~~~l~~~~~~~~~~~~~wl~~~~~~~~~ig~Dp~l~s~~~~~~l~~~~~~~~~~l~~~~~nliD 152 (623)
T 3ctz_A 74 TDGRYFLQ-AAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHLIPVKENLVD 152 (623)
T ss_dssp ECGGGHHH-HHHHBCTTEEEEETTSTTCCCHHHHHHHHCCTTCEEEECGGGSBHHHHHHHHHHHHHTTCEEEECSSCHHH
T ss_pred ECCHHHHH-HHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHH
T ss_conf 88619999-99961998099964888998999999986468998998885378999999999998779879974411778
Q ss_pred HH
Q ss_conf 56
Q gi|254780605|r 309 LL 310 (609)
Q Consensus 309 ~l 310 (609)
..
T Consensus 153 ~i 154 (623)
T 3ctz_A 153 KI 154 (623)
T ss_dssp HH
T ss_pred HH
T ss_conf 87
No 35
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/proteomics initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii OT3} PDB: 1pv9_A
Probab=98.59 E-value=7.9e-07 Score=66.03 Aligned_cols=119 Identities=15% Similarity=0.216 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCHHHHHHCCCC-CCEEEEEECCCCEEEECCHHHHHHHHHHCCCC
Q ss_conf 89999999999974997999608887478606671061004414676-50077895783679978814899998619671
Q gi|254780605|r 15 FERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTG-SAGIAIVLRQKSVIFVDGRYTLQVEKEVDTAL 93 (609)
Q Consensus 15 ~erL~~LR~~m~~~~idayiip~~D~h~sEyv~~~~~rl~~isGFtG-SaG~aiIt~~~a~L~tDgRY~lQA~~el~~~~ 93 (609)
.+||++||+.|+++++||+++.+. .-..|+|||++ ..++++|+.++..||++.+..-+|..+.....
T Consensus 5 ~~Rl~rl~~~m~~~~lDalll~~~------------~ni~YltG~~~~~~~~l~i~~~~~~l~~~~~~~~~~~~~~~~~~ 72 (351)
T 1wy2_A 5 NEKVKKIIEFMDKNSIDAVLIAKN------------PNVYYISGASPLAGGYILITGESATLYVPELEYEMAKEESNIPV 72 (351)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECSH------------HHHHHHHSCCCSSCCEEEEETTEEEEEEEHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCC------------HHHEECCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHCCCCE
T ss_conf 999999999998889999997882------------65141239499789899998996789987730789987629976
Q ss_pred EEEEECCCCCHHHHHHHHCCCCCEEEECCEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHH
Q ss_conf 79986689999998887437998899656341399999999985334761997050011122
Q gi|254780605|r 94 FTIKNIAIEPLHAWISEHGFVGLRLGLDSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDSL 155 (609)
Q Consensus 94 ~~~~~~~~~~~~~wl~~~~~~g~~IG~Dp~l~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~i 155 (609)
... ....++.. .+....+||+|.. ++...++.+.+.+. +..++... ++++.+
T Consensus 73 ---~~~--~~~~~~~~-~l~~~k~igie~~-~~~~~~~~l~~~~~--~~~~vd~~-~~i~~l 124 (351)
T 1wy2_A 73 ---EKF--KKMDEFYK-ALEGIKSLGIESS-LPYGFIEELKKKAN--IKEFKKVD-DVIRDM 124 (351)
T ss_dssp ---EEE--SSHHHHHH-HHTTCSEEEECTT-CBHHHHHHHHHHSC--CCEEEECH-HHHHHH
T ss_pred ---EEE--EECHHHHH-HHCCCCEEEECCC-CCHHHHHHHHHHCC--CCEEEECH-HHHHHH
T ss_conf ---986--30024677-7436765987378-87999999985278--86388848-999998
No 36
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=98.36 E-value=5.7e-06 Score=60.06 Aligned_cols=129 Identities=15% Similarity=0.088 Sum_probs=97.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCHHHHHHCCCC----CCEEEEEECCCCEEEECCHHHHHHHH
Q ss_conf 75589999999999974997999608887478606671061004414676----50077895783679978814899998
Q gi|254780605|r 12 SKTFERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTG----SAGIAIVLRQKSVIFVDGRYTLQVEK 87 (609)
Q Consensus 12 ~~~~erL~~LR~~m~~~~idayiip~~D~h~sEyv~~~~~rl~~isGFtG----SaG~aiIt~~~a~L~tDgRY~lQA~~ 87 (609)
..-.+|+++||+.|+++++||++|.+. .-..|+|||+. .....|+..++..+++.+....++..
T Consensus 22 ~E~~~R~~rl~~~m~~~~lDalvi~~~------------~ni~YlTG~~~~~~~~~~~~v~~~~~~~~i~~~~~~~~~~~ 89 (402)
T 1kp0_A 22 AEMTRRZBRLRAWMAKSBIDAVLFTSY------------HNINYYSGWLYCYFGRKYAZVIBZVKAVTISKGIDGGMPWR 89 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECSH------------HHHHHHHSCCCCCTTCCCEEEECSSCEEEEEEGGGTTHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCC------------CCCEEECCCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHH
T ss_conf 999999999999999879999987984------------01371029977666650699965993399975300566776
Q ss_pred HHCCCCEEEEECCCCCHHHHHHHHCCCCCEEEECCEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHH
Q ss_conf 61967179986689999998887437998899656341399999999985334761997050011122
Q gi|254780605|r 88 EVDTALFTIKNIAIEPLHAWISEHGFVGLRLGLDSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDSL 155 (609)
Q Consensus 88 el~~~~~~~~~~~~~~~~~wl~~~~~~g~~IG~Dp~l~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~i 155 (609)
+.-.............+.+++........++|++...++...++.+++.+.. ..++.. .++|+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~~vd~-~~~i~~~ 154 (402)
T 1kp0_A 90 RSFGBNIVYTDWKRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRRZLZKALPG--TEFVDV-GZPVMWZ 154 (402)
T ss_dssp HCSSEEEEECSSSTTHHHHHHHHHHTTCSEEEECTTTCBHHHHHHHHHHSTT--CEEEEC-HHHHHHH
T ss_pred HCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHCCC--CEEEEC-HHHHHHH
T ss_conf 3258726972666304999999874203312210003469999999975899--867635-3689998
No 37
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=98.13 E-value=2.9e-05 Score=55.12 Aligned_cols=134 Identities=14% Similarity=0.074 Sum_probs=94.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCHHHHHHCCCCC----CEEEEEECCCCEEEECCHHHH
Q ss_conf 8888755899999999999749979996088874786066710610044146765----007789578367997881489
Q gi|254780605|r 8 KSSPSKTFERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTGS----AGIAIVLRQKSVIFVDGRYTL 83 (609)
Q Consensus 8 ~~~~~~~~erL~~LR~~m~~~~idayiip~~D~h~sEyv~~~~~rl~~isGFtGS----aG~aiIt~~~a~L~tDgRY~l 83 (609)
+-++..-.+|+++||+.|+++++||.+|.+.+ -..|+|||++. ...+|++.++..+++.+...-
T Consensus 17 ~fs~~E~~~R~~rl~~~m~~~~lDalvi~~~~------------ni~ylTG~~~~~~~~~~~lv~~~~~~~~i~~~~~~~ 84 (401)
T 1chm_A 17 TFSAQEYANRQARLRAHLAAENIDAAIFTSYH------------NINYYSDFLYCSFGRPYALVVTEDDVISISANIDGG 84 (401)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCSEEEECSHH------------HHHHHHSCCCCCTTCCCEEEECSSCEEEEEEGGGTT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC------------CCEEECCCCCCCCCCEEEEEEECCCEEEEEECCCHH
T ss_conf 97999999999999999998799899989985------------515414989888886089999289729999453236
Q ss_pred HHHHHHCCCC-EEEEECCCCCHHHHHHHHCCCCCEEEECCEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf 9998619671-799866899999988874379988996563413999999999853347619970500111220
Q gi|254780605|r 84 QVEKEVDTAL-FTIKNIAIEPLHAWISEHGFVGLRLGLDSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDSLW 156 (609)
Q Consensus 84 QA~~el~~~~-~~~~~~~~~~~~~wl~~~~~~g~~IG~Dp~l~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~iW 156 (609)
.+..+.-..- +.............+.........++++....+...+..+...+.. ..++.. .++++.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~vd~-~~~i~~~R 155 (401)
T 1chm_A 85 QPWRRTVGTDNIVYTDWQRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAARYPD--AELVDV-AAACMRMR 155 (401)
T ss_dssp HHHHHCCSSEEEEECTTSTTHHHHHHHHHCSCCSEEEECTTTCBHHHHHHHHHHCTT--CEEEEC-HHHHHHHH
T ss_pred HHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC--CEEEEC-HHHHHHHH
T ss_conf 788750266327852676423999998740123433333343449999998730899--678516-67999988
No 38
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii OT3} PDB: 2how_A
Probab=98.08 E-value=4e-06 Score=61.09 Aligned_cols=119 Identities=16% Similarity=0.118 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCHHHHHHCCCCC-----CEEEEEECCCCEEEECCHHHHHHHHHHCC
Q ss_conf 9999999999749979996088874786066710610044146765-----00778957836799788148999986196
Q gi|254780605|r 17 RVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTGS-----AGIAIVLRQKSVIFVDGRYTLQVEKEVDT 91 (609)
Q Consensus 17 rL~~LR~~m~~~~idayiip~~D~h~sEyv~~~~~rl~~isGFtGS-----aG~aiIt~~~a~L~tDgRY~lQA~~el~~ 91 (609)
||++||+.|+++++||.+|.+.+ -..|+|||.+. .+.++|+++...+++..+....+..+.
T Consensus 2 Rl~rl~~~m~~~~ldalvi~~~~------------ni~YltG~~~~~~~~~~~~lvv~~~g~~~li~~~~~~~~~~~~-- 67 (356)
T 1wn1_A 2 RLEKFIHLLGERGFDGALISPGT------------NLYYLTGLRLHEVGERLAILAVSAEGDYRFLAPSLYENVVNNF-- 67 (356)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSH------------HHHHHHCCCCSCCTTSCCEEEEETTSCEEEEEEGGGTTTTTTS--
T ss_pred HHHHHHHHHHHCCCCEEEECCCH------------HHHHHHCCCCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHCC--
T ss_conf 79999999998799999977933------------3558729956888885199999589988999787778776328--
Q ss_pred CCEEEEECCC---CCHHHHHHHHCCCCCEEEECCEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHH
Q ss_conf 7179986689---999998887437998899656341399999999985334761997050011122
Q gi|254780605|r 92 ALFTIKNIAI---EPLHAWISEHGFVGLRLGLDSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDSL 155 (609)
Q Consensus 92 ~~~~~~~~~~---~~~~~wl~~~~~~g~~IG~Dp~l~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~i 155 (609)
......... ..+.+.+.+....+.+||+|..... .....+. .+ .+..++.. ..+++.+
T Consensus 68 -~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~-~~~~~~~-~l--~~~~~~d~-~~~l~~l 128 (356)
T 1wn1_A 68 -PATFWHDGENPYAKLREILEELGISKGRILIEDTMRA-DWLIGIM-KL--GKFTFQPL-SSLIKEL 128 (356)
T ss_dssp -CEEEECTTSCHHHHHHHHHHHTTCSSEEEEECTTSBH-HHHHHHG-GG--SCEEEEET-HHHHHHH
T ss_pred -CEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCHH-HHHHHHH-HC--CCCEEEEC-HHHHHHH
T ss_conf -8058972578899999999983866762898612069-9999998-66--89879986-7999999
No 39
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, activator, chromosomal protein, coiled coil, DNA damage; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=97.04 E-value=0.017 Score=35.80 Aligned_cols=141 Identities=12% Similarity=0.157 Sum_probs=80.6
Q ss_pred CHHHHHHHHHHHHHHC--CCCEEEEE--CCCCCCCCCCCCHHCHHHHHHCCCCCCEEEEEECCCCEEEECCHH---HHHH
Q ss_conf 5589999999999974--99799960--888747860667106100441467650077895783679978814---8999
Q gi|254780605|r 13 KTFERVHNLRSCFDSL--GMDAFLVP--RVDEYRGEFVDKGSERLAWLSGFTGSAGIAIVLRQKSVIFVDGRY---TLQV 85 (609)
Q Consensus 13 ~~~erL~~LR~~m~~~--~idayiip--~~D~h~sEyv~~~~~rl~~isGFtGSaG~aiIt~~~a~L~tDgRY---~lQA 85 (609)
.=.+||++||+.|+++ ++|+.+|- ++|.- +-|. ....-..|+|||.......|++.+..++.++++. +.++
T Consensus 12 ~f~~Rl~~l~~~~~~~~~~~dal~i~~g~~~~d-~~Y~-~~~~~~~yLtG~~~p~t~lvl~~~~~~il~~~~k~~~~~~~ 89 (467)
T 3biq_A 12 VFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAE-NPYQ-KTTILHNWLLSYEFPATLIALVPGKVIIITSSAKAKHLQKA 89 (467)
T ss_dssp HHHHHHHHHHHHGGGSTTCCSEEEEEECSCCTT-STTC-HHHHHHHHHHSSCCSSEEEEEETTEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC-CCCC-CCCCCCEECCCCCCCCEEEEECCCEEEEEECCCCCEEECCC
T ss_conf 999999999998774046999899982899877-3440-26877153268887767999818908999579865122242
Q ss_pred HHHHCCC----CEEEEECCCCCHH-------HHHHHHCCCCCEEEECCEE-CC---HHH-HHHHHHHHHHCCCEEEECCC
Q ss_conf 9861967----1799866899999-------9888743799889965634-13---999-99999985334761997050
Q gi|254780605|r 86 EKEVDTA----LFTIKNIAIEPLH-------AWISEHGFVGLRLGLDSRL-HS---SFE-VDLLQKSLDKIEGVIVDVPY 149 (609)
Q Consensus 86 ~~el~~~----~~~~~~~~~~~~~-------~wl~~~~~~g~~IG~Dp~l-~s---~~~-~~~l~~~l~~~~~~l~~~~~ 149 (609)
....... ...+......... .++..-...+.++|...+- .+ ... ...+...+...++.++.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~d~~~g~~~~~~~~~~~~~~~~~~~~~vd~~- 168 (467)
T 3biq_A 90 IDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAVKENEFNVIDIS- 168 (467)
T ss_dssp HGGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHHHHHTCEEEECH-
T ss_pred CHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECH-
T ss_conf 0344401138625899804774212999999999997447968999434220577889999999986652798288758-
Q ss_pred HHHHHHH
Q ss_conf 0111220
Q gi|254780605|r 150 NPIDSLW 156 (609)
Q Consensus 150 NlVD~iW 156 (609)
.+|+.+.
T Consensus 169 ~~l~~lR 175 (467)
T 3biq_A 169 LGLSKVW 175 (467)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
T ss_conf 9999999
No 40
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H3/H4 chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=96.58 E-value=0.043 Score=33.02 Aligned_cols=142 Identities=13% Similarity=0.140 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHHH--------CCCCEEEEECC-CCCCCCCCCCHHCHHHHHHCCCCCCEEEEEECCCCEEEECCHHH-
Q ss_conf 558999999999997--------49979996088-87478606671061004414676500778957836799788148-
Q gi|254780605|r 13 KTFERVHNLRSCFDS--------LGMDAFLVPRV-DEYRGEFVDKGSERLAWLSGFTGSAGIAIVLRQKSVIFVDGRYT- 82 (609)
Q Consensus 13 ~~~erL~~LR~~m~~--------~~idayiip~~-D~h~sEyv~~~~~rl~~isGFtGSaG~aiIt~~~a~L~tDgRY~- 82 (609)
.=.+||++|++.+++ .++|+.+|... -..-+.|. ....-..||+||.-..-..|+++++.++.|..+..
T Consensus 12 ~F~~Rl~~l~~~~~~~~~~~~~~~~~d~i~~~~g~~~~~~~y~-k~~~~~~wL~G~e~pdt~lvl~~~~~~~l~~~kk~~ 90 (444)
T 3cb6_A 12 TFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQ-KSTALHTWLLGYEFPSTLILLEKHRITILTSVNKAN 90 (444)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCCTTCCCC-HHHHHHHHHHSSCCSSEEEEEETTEEEEEEEHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCCCE-ECCHHHEHHHCCCCCCEEEEECCCCEEEEECCCHHH
T ss_conf 9999999999997634564034438998999438877676421-122010123178775669998389389981673688
Q ss_pred -HHHHHHHCCCCEE--EEECCCC------CHHHHHHHHCCCCCEEEECCE-ECCHHHHHHHHHHHHH--CCCEEEECCCH
Q ss_conf -9999861967179--9866899------999988874379988996563-4139999999998533--47619970500
Q gi|254780605|r 83 -LQVEKEVDTALFT--IKNIAIE------PLHAWISEHGFVGLRLGLDSR-LHSSFEVDLLQKSLDK--IEGVIVDVPYN 150 (609)
Q Consensus 83 -lQA~~el~~~~~~--~~~~~~~------~~~~wl~~~~~~g~~IG~Dp~-l~s~~~~~~l~~~l~~--~~~~l~~~~~N 150 (609)
++-..+....... +...... .....+......+.+||+-++ .........+.+.+++ .+..++..+ +
T Consensus 91 ~l~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~i~~~~~~vG~~~kd~~~g~~~~~~~~~l~~~~~~~~~vD~s-~ 169 (444)
T 3cb6_A 91 MLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVFPKDKTQGKFINEWDSIFEPVKSEFNLVDAS-L 169 (444)
T ss_dssp TTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHHHHHTTTSEEEECTTCCCCSHHHHHHHHHHTTTGGGSEEEECH-H
T ss_pred HHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECH-H
T ss_conf 888775212568874899704664225779999999976326608997133555457999999998605998599678-9
Q ss_pred HHHHHH
Q ss_conf 111220
Q gi|254780605|r 151 PIDSLW 156 (609)
Q Consensus 151 lVD~iW 156 (609)
++.++.
T Consensus 170 ~l~~lR 175 (444)
T 3cb6_A 170 GLAKCL 175 (444)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999998
No 41
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=94.42 E-value=0.13 Score=29.82 Aligned_cols=70 Identities=10% Similarity=0.054 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCC-----CCCCCCHHC-HHHHHHCCCCCCEEEEEECCCC---EEEECCHHHH
Q ss_conf 58999999999997499799960888747-----860667106-1004414676500778957836---7997881489
Q gi|254780605|r 14 TFERVHNLRSCFDSLGMDAFLVPRVDEYR-----GEFVDKGSE-RLAWLSGFTGSAGIAIVLRQKS---VIFVDGRYTL 83 (609)
Q Consensus 14 ~~erL~~LR~~m~~~~idayiip~~D~h~-----sEyv~~~~~-rl~~isGFtGSaG~aiIt~~~a---~L~tDgRY~l 83 (609)
..++-+.+|++|+++++||.||.+...-. ..|.=-.+. -+.|+||+.....++++..+.. .+..+.+|+.
T Consensus 12 ~~~lq~R~r~lm~~~~lDalll~sg~~~~~~~~D~~ypFrq~s~F~~YLtg~~~p~~~lvi~~~~~~~ll~~~~~d~~~ 90 (517)
T 3l24_A 12 IATLQKRTREIIERENLDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDFWH 90 (517)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTSSCCSCSSCEEEECSSSCCEEEEECCCCSSS
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCEEEEEECCCCHHH
T ss_conf 9999999999985269898999779622670598668865689877574378989889999789987999937740230
No 42
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitabread fold; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=93.53 E-value=0.38 Score=26.43 Aligned_cols=69 Identities=6% Similarity=0.090 Sum_probs=32.0
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCEEECCCCEEEEECCC
Q ss_conf 21001245301889999999875433027855554100001-23354322224554332050389879983032
Q gi|254780605|r 342 SQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAA-SGPHAAIIHYQATVQSNRLLQKDELLLLDSGA 414 (609)
Q Consensus 342 ~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva-~G~N~AipHY~~~~~s~~~i~~~~~~LiDsG~ 414 (609)
+.++.|.+=.++.+..+++-.+.+......+.+- .|-. +....-++||. .+..+.+|++|-++-|.-|-
T Consensus 206 ~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~~gh---giG~~~~~~~~~~~~~-~~~~~~~Le~GMVftIEP~i 275 (329)
T 2b3h_A 206 DAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGH---GIHKLFHTAPNVPHYA-KNKAVGVMKSGHVFTIEPMI 275 (329)
T ss_dssp HTCCTTCBTTHHHHHHHHHHHHTTCEECCSCCEE---ECSSSSSEEEEECCSS-SCCCCCBCCTTCEEEECCEE
T ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC---CCCCCCCCCCCCCCCC-CCCCCCEECCCCEEEECCEE
T ss_conf 9726998899999999999998699542042465---7767434687436655-44678884698089989951
No 43
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidase P, manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=88.69 E-value=0.25 Score=27.74 Aligned_cols=64 Identities=16% Similarity=0.280 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCC-C-----CCCCCHHCHHHHHHCCCCCCEEEEEEC-----CCCEEEECCH
Q ss_conf 558999999999997499799960888747-8-----606671061004414676500778957-----8367997881
Q gi|254780605|r 13 KTFERVHNLRSCFDSLGMDAFLVPRVDEYR-G-----EFVDKGSERLAWLSGFTGSAGIAIVLR-----QKSVIFVDGR 80 (609)
Q Consensus 13 ~~~erL~~LR~~m~~~~idayiip~~D~h~-s-----Eyv~~~~~rl~~isGFtGSaG~aiIt~-----~~a~L~tDgR 80 (609)
.-.+|+++|++.|+++++ .++.++++.. + .|-+.+ -..|+|||+.....+|+++ .+..||+.-+
T Consensus 7 Ef~~Rr~~L~~~m~~~~~--~il~s~~~~~r~~D~~y~Frq~s--nf~YLTG~~~p~~~lvi~~~~~~~~~~~Lf~~~~ 81 (440)
T 2v3z_A 7 EFQRRRQALVEQMQPGSA--ALIFAAPEVTRSADSEYPYRQNS--DFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVR 81 (440)
T ss_dssp HHHHHHHHHHHHSCSSEE--EEEECCCCCEEETTEECCCCCCH--HHHHHHCCCCSSCEEEEEECSSSCEEEEEEECCC
T ss_pred HHHHHHHHHHHHCCCCCE--EEEECCCCCCCCCCCCCCCCCCC--CEEEECCCCCCCEEEEEEECCCCCCEEEEEECCC
T ss_conf 999999999974866888--99968974324788877766777--7353059899887999983489986499995799
No 44
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, structural genomics, center for structural genomics of infectious diseases; HET: SO4; 2.89A {Bacillus anthracis}
Probab=87.49 E-value=0.21 Score=28.23 Aligned_cols=73 Identities=8% Similarity=0.189 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCC-CCC-----CCCCCHHCHHHHHHCCCCCCEEEEEECC----CCEEEEC-----
Q ss_conf 589999999999974997999608887-478-----6066710610044146765007789578----3679978-----
Q gi|254780605|r 14 TFERVHNLRSCFDSLGMDAFLVPRVDE-YRG-----EFVDKGSERLAWLSGFTGSAGIAIVLRQ----KSVIFVD----- 78 (609)
Q Consensus 14 ~~erL~~LR~~m~~~~idayiip~~D~-h~s-----Eyv~~~~~rl~~isGFtGSaG~aiIt~~----~a~L~tD----- 78 (609)
=++|.++|++.|++++++ |++++++ +.+ .|.+ +.-..|+|||.-..+.+|+..+ +..||+.
T Consensus 6 f~~Rr~rL~~~m~~~~i~--il~~~~~~~~~~D~~~pFrq--~snf~YlTG~~~p~~~lvl~~~~~~~~~iLfv~~~~~~ 81 (427)
T 3ig4_A 6 FAQNRERLVNTLPDESIT--ILFAGQAPHMSADAHYKFVP--NRNFYYVTGIDEPNVIFMLKKFGNSVEETLFIEKSDPV 81 (427)
T ss_dssp HHHHHHHHHTTSCSSEEE--EEECCCCCEEETTEECCCCC--CHHHHHHHCCCSTTCEEEEEEETTEEEEEEEECCCCTT
T ss_pred HHHHHHHHHHHCCCCCEE--EEECCCCEEECCCCCCCCCC--CCCEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHH
T ss_conf 999999999758568899--99479733416998877666--79757846889989799998469985489996788977
Q ss_pred ------CHHHHHHHHHHC
Q ss_conf ------814899998619
Q gi|254780605|r 79 ------GRYTLQVEKEVD 90 (609)
Q Consensus 79 ------gRY~lQA~~el~ 90 (609)
.|+..+..++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~ 99 (427)
T 3ig4_A 82 MEKWVGKTVSNEEAEKIS 99 (427)
T ss_dssp GGGTTCCCCCHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHCC
T ss_conf 866635530112233304
No 45
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=74.05 E-value=2.7 Score=20.51 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=23.6
Q ss_pred CCCCCCCEECCCCEEEECCCEEEC-----CCCCEEEEE
Q ss_conf 377898600569878846860356-----875215002
Q gi|254780605|r 500 ISRTNQEPLLPGMILSNEPGYYRC-----GAFGIRIEN 532 (609)
Q Consensus 500 is~~~~~~l~~Gmv~s~EPG~Y~~-----g~~GiRIEn 532 (609)
+.++....|+||..+|++||.|-. |.+++-|+-
T Consensus 168 ~~~G~~l~L~PGesiTI~Pg~~H~F~a~~G~gdVlI~E 205 (246)
T 3kmh_A 168 HTAGSQLRLSPGESICLPPGLYHSFWAEAGFGDVLVGE 205 (246)
T ss_dssp ECTTCEEEECTTCEEEECTTEEEEEEECTTSCCEEEEE
T ss_pred ECCCCEEEECCCCEEECCCCCEEEEEECCCCCCEEEEE
T ss_conf 67997798789996980799807889548997789999
No 46
>1ynf_A Succinylarginine dihydrolase; 1.90A {Escherichia coli} SCOP: d.126.1.7 PDB: 1ynh_A* 1yni_A*
Probab=59.52 E-value=5.4 Score=18.41 Aligned_cols=64 Identities=17% Similarity=0.204 Sum_probs=47.2
Q ss_pred CC-CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH--HHHHHHHHHHHHHH
Q ss_conf 32-115666199999987999984438999999875332100124530188--99999998754330
Q gi|254780605|r 305 DP-SCLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDII--KKLERCREEIGCKM 368 (609)
Q Consensus 305 ~p-I~~lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia--~~Le~~R~~~~~~~ 368 (609)
.| |..+|.+=|+.|++.+...-+.|..-+.+.-.|+++.-.+.++.-|++ +.|.+-|.......
T Consensus 373 GPACLRLRVvL~~~E~~avn~~~lm~~~l~~~L~~wV~~hYRd~L~~~DLaDP~Ll~E~r~ALDeLT 439 (458)
T 1ynf_A 373 GPACLRLRVVLTEEERRAVNPAVMMNDTLFNALNDWVDRYYRDRLTAADLADPQLLREGREALDVLS 439 (458)
T ss_dssp CTTTTEEEEEECHHHHHHSCGGGBCSHHHHHHHHHHHHHHCCSCBCGGGGGCHHHHHHHHHHHHHHH
T ss_pred CCHHHEEEEECCHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHH
T ss_conf 7622215342678999726966242899999999999986623399345369799999999999999
No 47
>1gxq_A PHOB, phosphate regulon transcriptional regulatory protein; transcriptional activator, helix-winged-helix, sensory transduction; 2.0A {Escherichia coli} SCOP: a.4.6.1 PDB: 1gxp_A 1qqi_A 2z33_A
Probab=45.17 E-value=13 Score=15.72 Aligned_cols=69 Identities=16% Similarity=0.172 Sum_probs=41.7
Q ss_pred EEEECCEE--CCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHCCCC
Q ss_conf 89965634--1399999999985334761997050011122012763322000120123358773889999998602334
Q gi|254780605|r 117 RLGLDSRL--HSSFEVDLLQKSLDKIEGVIVDVPYNPIDSLWKDRPQRLYRKVAMQDMAYAGRESQEKIRDICKILHQKE 194 (609)
Q Consensus 117 ~IG~Dp~l--~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~iW~~rP~~~~~~i~~~~~~~aG~s~~eKi~~ir~~L~~~~ 194 (609)
.+-++... +|..+++-|.--+.+.+ ..+. .+.|++.+|.+.... ...+...-|.+||++|+..+
T Consensus 22 ~v~~~~~~i~Lt~~E~~lL~~L~~~~g-~vvs-r~~l~~~vw~~~~~~------------~~~~l~~~I~rLRkkl~~~~ 87 (106)
T 1gxq_A 22 RVMAGEEPLEMGPTEFKLLHFFMTHPE-RVYS-REQLLNHVWGTNVYV------------EDRTVDVHIRRLRKALEPGG 87 (106)
T ss_dssp EEEETTEECCCCHHHHHHHHHHHHSCS-SEEC-HHHHHHHHTCSSSCC------------CTHHHHHHHHHHHHHHGGGT
T ss_pred EEEECCEEEECCHHHHHHHHHHHHCCC-CCCC-HHHHHHHHCCCCCCC------------CCCCHHHHHHHHHHHHHCCC
T ss_conf 999999998759999999999986767-6776-999999873877689------------98779999999999851259
Q ss_pred CEEEE
Q ss_conf 30676
Q gi|254780605|r 195 VGAVF 199 (609)
Q Consensus 195 ~dali 199 (609)
.+.++
T Consensus 88 ~~~~I 92 (106)
T 1gxq_A 88 HDRMV 92 (106)
T ss_dssp GGGGE
T ss_pred CCCCE
T ss_conf 99829
No 48
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=39.30 E-value=12 Score=15.98 Aligned_cols=54 Identities=17% Similarity=0.271 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCC-CCCCCHHHHHHHHCCCCCCEEECCCCC
Q ss_conf 7738899999986023343067602842023443201355-377870023322014786200035311
Q gi|254780605|r 177 RESQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFD-IPCSPYPLSRAILYADGKAEIFFDKQY 243 (609)
Q Consensus 177 ~s~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~D-i~~tPv~~a~aiI~~~~~~~Lfvd~~k 243 (609)
..|.+=.++|++.++..++|+++|+- |.| +.||-.++++++ . ..+++.|+-..+
T Consensus 65 ~~w~~la~~i~~~l~~~~~dG~VVtH-----------GTDTm~~TA~~Ls~~l-~-~~kPVVlTGaqr 119 (331)
T 1agx_A 65 KELLSLARQVNDLVKKPSVNGVVITH-----------GTDTMEETAFFLNLVV-H-TDKPIVLVGSMR 119 (331)
T ss_dssp HHHHHHHHHHHHHHTSTTCCEEEEEC-----------CGGGHHHHHHHHHHHC-C-CSSCEEEECCSS
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEC-----------CCCHHHHHHHHHHHHH-C-CCCCEEEECCCC
T ss_conf 99999999999997266877499967-----------8641999999999986-4-599879968787
No 49
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.03 E-value=1.8 Score=21.71 Aligned_cols=31 Identities=29% Similarity=0.330 Sum_probs=14.4
Q ss_pred CCCCCEEEEEECCCCEEEECCHHHHHHHHHHC
Q ss_conf 67650077895783679978814899998619
Q gi|254780605|r 59 FTGSAGIAIVLRQKSVIFVDGRYTLQVEKEVD 90 (609)
Q Consensus 59 FtGSaG~aiIt~~~a~L~tDgRY~lQA~~el~ 90 (609)
=|||.|+. +-.+--+=|+||||++--=++++
T Consensus 2 ssg~sgf~-~GedVLa~wsDgrfYlg~I~~V~ 32 (63)
T 2e5q_A 2 SSGSSGLT-EGQYVLCRWTDGLYYLGKIKRVS 32 (63)
T ss_dssp CCSCCCCC-TTCEEEEECTTSCEEEEEECCCC
T ss_pred CCCCCCCC-CCCEEEEEECCCCEEEEEEEEEE
T ss_conf 87778764-48889998216868777889980
No 50
>2k4j_A Putative transcriptional regulator; response regulator, acid resistance, DNA-binding, phosphoprotein, transcription regulation; NMR {Helicobacter pylori J99}
Probab=37.53 E-value=12 Score=16.00 Aligned_cols=68 Identities=7% Similarity=-0.022 Sum_probs=40.1
Q ss_pred CEEEECCEEC--CHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHCCC
Q ss_conf 8899656341--39999999998533476199705001112201276332200012012335877388999999860233
Q gi|254780605|r 116 LRLGLDSRLH--SSFEVDLLQKSLDKIEGVIVDVPYNPIDSLWKDRPQRLYRKVAMQDMAYAGRESQEKIRDICKILHQK 193 (609)
Q Consensus 116 ~~IG~Dp~l~--s~~~~~~l~~~l~~~~~~l~~~~~NlVD~iW~~rP~~~~~~i~~~~~~~aG~s~~eKi~~ir~~L~~~ 193 (609)
.++-++...+ |..++.-|..-+.+.+. .+ ....|++.+|...+.... .+...-|.+||++|+..
T Consensus 31 ~~v~~~~~~i~Lt~~E~~lL~~L~~~~g~-vv-sr~~L~~~vW~~~~~~~~------------~~l~~~I~rLRkkl~~~ 96 (115)
T 2k4j_A 31 REVYMHEKKLDLTRAEYEILSLLISKKGY-VF-SRESIAIESESINPESSN------------KSIDVIIGRLRSKIEKN 96 (115)
T ss_dssp TEEEETTEEECSCHHHHHHHHHHHHHCCC-EE-CHHHHHHHTCCSSCTTCH------------HHHHHHHHHHHHHHHHS
T ss_pred CEEEECCEEEECCHHHHHHHHHHHHCCCE-EE-EHHHHHHHHHCCCCCCCC------------HHHHHHHHHHHHHHHHC
T ss_conf 99999999972799999999999857993-78-699999997167867783------------20999999999985315
Q ss_pred CCEE
Q ss_conf 4306
Q gi|254780605|r 194 EVGA 197 (609)
Q Consensus 194 ~~da 197 (609)
+...
T Consensus 97 ~~~~ 100 (115)
T 2k4j_A 97 PKQP 100 (115)
T ss_dssp SCCC
T ss_pred CCCC
T ss_conf 8999
No 51
>2z9m_A Response regulator YYCF; two-component system, YYCG, helix-turn- helix motif, DNA-binding domain, phosphorylation, transcription; 1.87A {Staphylococcus aureus} PDB: 2zxj_A 2d1v_A
Probab=37.33 E-value=15 Score=15.40 Aligned_cols=69 Identities=12% Similarity=0.115 Sum_probs=38.0
Q ss_pred EEECCEE--CCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 9965634--13999999999853347619970500111220127633220001201233587738899999986023343
Q gi|254780605|r 118 LGLDSRL--HSSFEVDLLQKSLDKIEGVIVDVPYNPIDSLWKDRPQRLYRKVAMQDMAYAGRESQEKIRDICKILHQKEV 195 (609)
Q Consensus 118 IG~Dp~l--~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~iW~~rP~~~~~~i~~~~~~~aG~s~~eKi~~ir~~L~~~~~ 195 (609)
+-+++.. +|..++.-|.--+.+.+.. +. .+.|++.||... ..+. ..+...-|.+||++|+..+.
T Consensus 28 v~~~g~~i~Lt~~E~~lL~~L~~~~g~v-vs-r~~L~~~vW~~~-~~~~-----------~~~l~~~I~rLRkkL~~~~~ 93 (120)
T 2z9m_A 28 IKKRGEDIELTHREFELFHYLSKHMGQV-MT-REHLLQTVWGYD-YFGD-----------VRTVDVTIRRLREKIEDDPS 93 (120)
T ss_dssp EEETTEEECCCHHHHHHHHHHHTTTTCC-EE-HHHHHHHHHCTT-CCSC-----------THHHHHHHHHHHHHHCSSTT
T ss_pred EEECCEEEECCHHHHHHHHHHHHCCCCE-EE-HHHHHHHCCCCC-CCCC-----------CCEEHHHHHHHHHHHHHCCC
T ss_conf 9999999976999999999999789963-75-689666503777-7898-----------87703589999999750789
Q ss_pred EEEEE
Q ss_conf 06760
Q gi|254780605|r 196 GAVFI 200 (609)
Q Consensus 196 dalii 200 (609)
+..+|
T Consensus 94 ~~~~I 98 (120)
T 2z9m_A 94 HPEYI 98 (120)
T ss_dssp SCSSE
T ss_pred CCCEE
T ss_conf 99849
No 52
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=36.86 E-value=5 Score=18.65 Aligned_cols=16 Identities=38% Similarity=0.578 Sum_probs=10.7
Q ss_pred CEEEEECCCCEECCCCCCEE
Q ss_conf 87998303201056122214
Q gi|254780605|r 406 ELLLLDSGAQYVNGTTDITR 425 (609)
Q Consensus 406 ~~~LiDsG~qY~~GtTDiTR 425 (609)
.++++|.|| ||+|+|=
T Consensus 189 ~vlV~D~Gg----gt~d~sv 204 (383)
T 1dkg_D 189 TIAVYDLGG----GTFDISI 204 (383)
T ss_dssp EEEEEEECS----SCEEEEE
T ss_pred EEEEEEECC----CCEEEEE
T ss_conf 999999789----9099999
No 53
>1opc_A OMPR, OMPRC; transcription regulation, response regulator, winged helix, osmoregulation; 1.95A {Escherichia coli} SCOP: a.4.6.1 PDB: 1odd_A 2jpb_A
Probab=36.74 E-value=17 Score=14.97 Aligned_cols=71 Identities=8% Similarity=0.040 Sum_probs=42.7
Q ss_pred EEEECCEE--CCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHCCCC
Q ss_conf 89965634--1399999999985334761997050011122012763322000120123358773889999998602334
Q gi|254780605|r 117 RLGLDSRL--HSSFEVDLLQKSLDKIEGVIVDVPYNPIDSLWKDRPQRLYRKVAMQDMAYAGRESQEKIRDICKILHQKE 194 (609)
Q Consensus 117 ~IG~Dp~l--~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~iW~~rP~~~~~~i~~~~~~~aG~s~~eKi~~ir~~L~~~~ 194 (609)
.+-++... +|..+++-|.--+.+.+ ..+. .+.|++.+|..... ..-.+...-|.+||++|+..+
T Consensus 22 ~l~~~~~~i~Lt~~E~~lL~~L~~~~g-~vvs-r~~L~~~vw~~~~~------------~~~~~i~~~I~rLRkkl~~~~ 87 (110)
T 1opc_A 22 EMFREDEPMPLTSGEFAVLKALVSHPR-EPLS-RDKLMNLARGREYS------------AMERSIDVQISRLRRMVEEDP 87 (110)
T ss_dssp EEEETTEEECCCHHHHHHHHHHHHSTT-CCEE-HHHHHHHHCCSSSC------------TTSSCHHHHHHHHHHHHCSCT
T ss_pred EEEECCEEEECCHHHHHHHHHHHHCCC-EEEC-HHHHHHHHCCCCCC------------CCCCCHHHHHHHHHHHHHHCC
T ss_conf 999999999759999999999986477-7641-99998784386557------------674789999999999875368
Q ss_pred CEEEEEC
Q ss_conf 3067602
Q gi|254780605|r 195 VGAVFIC 201 (609)
Q Consensus 195 ~daliit 201 (609)
.+.-+|.
T Consensus 88 ~~~~~I~ 94 (110)
T 1opc_A 88 AHPRYIQ 94 (110)
T ss_dssp TSCSSEE
T ss_pred CCCCEEE
T ss_conf 9998499
No 54
>2hwv_A DNA-binding response regulator VICR; essential response regulator, C-terminal domain, DNA- binding domain, transcription; 1.90A {Enterococcus faecalis V583}
Probab=33.82 E-value=13 Score=15.79 Aligned_cols=13 Identities=8% Similarity=0.256 Sum_probs=6.1
Q ss_pred HHHHHHHHCCCCC
Q ss_conf 9999986023343
Q gi|254780605|r 183 IRDICKILHQKEV 195 (609)
Q Consensus 183 i~~ir~~L~~~~~ 195 (609)
|.+||++|+..+.
T Consensus 88 I~rLRkKl~~~~~ 100 (121)
T 2hwv_A 88 VRRLREKIEDSPS 100 (121)
T ss_dssp HHHHHHHHCSSTT
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999998761689
No 55
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=33.11 E-value=16 Score=15.06 Aligned_cols=56 Identities=21% Similarity=0.325 Sum_probs=36.4
Q ss_pred HCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCC-CCCCCHHHHHHHHCCCCCCEEECCCC
Q ss_conf 3587738899999986023343067602842023443201355-37787002332201478620003531
Q gi|254780605|r 174 YAGRESQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFD-IPCSPYPLSRAILYADGKAEIFFDKQ 242 (609)
Q Consensus 174 ~aG~s~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~D-i~~tPv~~a~aiI~~~~~~~Lfvd~~ 242 (609)
.+.+.|.+=.++|++.+...+.|+++|+- |.| +.||-.++++++= +.+++.|+...
T Consensus 65 mt~~~w~~la~~i~~~~~~~~~dG~VVtH-----------GTDTm~~TA~~Ls~~l~--~~kPVVlTGa~ 121 (327)
T 1o7j_A 65 MTGDVVLKLSQRVNELLARDDVDGVVITH-----------GTDTVEESAYFLHLTVK--SDKPVVFVAAM 121 (327)
T ss_dssp CCHHHHHHHHHHHHHHHTSTTCCEEEEEC-----------CSTTHHHHHHHHHHHCC--CCSCEEEECCS
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEEC-----------CCCHHHHHHHHHHHHHC--CCCCEEEECCC
T ss_conf 79999999999999985146886399966-----------85039999999999745--79988995576
No 56
>2v9y_A Phosphoribosylformylglycinamidine cyclo-ligase; multifunctional enzyme, structural genomics consortium, nucleotide-binding, purine biosynthesis; 2.10A {Homo sapiens}
Probab=32.19 E-value=11 Score=16.41 Aligned_cols=11 Identities=0% Similarity=0.184 Sum_probs=6.6
Q ss_pred EEECCCCEEEE
Q ss_conf 05038987998
Q gi|254780605|r 400 RLLQKDELLLL 410 (609)
Q Consensus 400 ~~i~~~~~~Li 410 (609)
..+++||.++.
T Consensus 143 ~~i~~GD~IIg 153 (334)
T 2v9y_A 143 ERITEGDVVVG 153 (334)
T ss_dssp GGCCTTCEEEE
T ss_pred CCCCCCCEEEE
T ss_conf 33677857999
No 57
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide- binding, phosphoprotein, polymorphism; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3fzh_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 1ngh_A* 1ngd_A* 1ngf_A* 1bup_A* 1nga_A* ...
Probab=31.06 E-value=12 Score=16.12 Aligned_cols=15 Identities=40% Similarity=0.831 Sum_probs=11.9
Q ss_pred CEEEEECCCCEECCCCCCE
Q ss_conf 8799830320105612221
Q gi|254780605|r 406 ELLLLDSGAQYVNGTTDIT 424 (609)
Q Consensus 406 ~~~LiDsG~qY~~GtTDiT 424 (609)
.++++|.|| ||||+|
T Consensus 215 ~vlVvD~Gg----gT~Dis 229 (404)
T 3i33_A 215 NVLIFDLGG----GTFDVS 229 (404)
T ss_dssp EEEEEEECS----SCEEEE
T ss_pred EEEEEEECC----CCEEEE
T ss_conf 899999489----909999
No 58
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=30.05 E-value=20 Score=14.42 Aligned_cols=43 Identities=12% Similarity=0.151 Sum_probs=23.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCC--------HHHHHHHHHHHHHHCC
Q ss_conf 88888433366778888899721789788--------8899998736677418
Q gi|254780605|r 432 VDYEKKYYFTLVLKGMISVSTARFPQRTR--------GCDLDSIARIFLWKYG 476 (609)
Q Consensus 432 ~~~e~k~~yt~VLk~~ial~~a~fp~g~~--------g~~lD~~aR~~l~~~g 476 (609)
|+-|+++-|..|.++- .-+..+||.|+- ....|.+.|. |.+.|
T Consensus 167 PpYE~k~Ey~~v~~~l-~~a~kR~~~G~~~iWYPi~~~~~~~~~~~~-l~~~~ 217 (283)
T 2oo3_A 167 PSYERKEEYKEIPYAI-KNAYSKFSTGLYCVWYPVVNKAWTEQFLRK-MREIS 217 (283)
T ss_dssp CCCCSTTHHHHHHHHH-HHHHHHCTTSEEEEEEEESSHHHHHHHHHH-HHHHC
T ss_pred CCCCCHHHHHHHHHHH-HHHHHHCCCCEEEEEEECCCHHHHHHHHHH-HHHCC
T ss_conf 9866543899999999-999986668659998204560888999999-98538
No 59
>2jzy_A Transcriptional regulatory protein PCOR; two-component-system response regulator, effector domain, DNA-binding, phosphoprotein, plasmid; NMR {Klebsiella pneumoniae}
Probab=27.79 E-value=24 Score=13.85 Aligned_cols=68 Identities=9% Similarity=0.016 Sum_probs=40.3
Q ss_pred EEEECCEE--CCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHCCCC
Q ss_conf 89965634--1399999999985334761997050011122012763322000120123358773889999998602334
Q gi|254780605|r 117 RLGLDSRL--HSSFEVDLLQKSLDKIEGVIVDVPYNPIDSLWKDRPQRLYRKVAMQDMAYAGRESQEKIRDICKILHQKE 194 (609)
Q Consensus 117 ~IG~Dp~l--~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~iW~~rP~~~~~~i~~~~~~~aG~s~~eKi~~ir~~L~~~~ 194 (609)
++=++... +|..++.-|..-+...+ ..+. ...|++.+|.+.+. ..-.+...-|.+||++|++.+
T Consensus 19 ~~~~~g~~i~Lt~~E~~lL~~L~~~~g-~vvs-r~~L~~~vw~~~~~------------~~~~~l~~~I~rLRkkL~~~~ 84 (112)
T 2jzy_A 19 TVIRSGKKIHLTGKEYVLLELLLQRTG-EVLP-RSLISSLVWNMNFD------------SDTNVIDVAVRRLRSKIDDDF 84 (112)
T ss_dssp CEEETTEECCCCHHHHHHHHHHHHTTT-SCBC-HHHHHHHHTCCCSS------------CSTTHHHHHHHHHHTTTTTTS
T ss_pred EEEECCEEEECCHHHHHHHHHHHHCCC-CCCC-HHHHHHHHCCCCCC------------CCCHHHHHHHHHHHHHHCCCC
T ss_conf 999999998659999999999984889-8743-99999861488756------------541129999999999856758
Q ss_pred CEEE
Q ss_conf 3067
Q gi|254780605|r 195 VGAV 198 (609)
Q Consensus 195 ~dal 198 (609)
...+
T Consensus 85 ~~~~ 88 (112)
T 2jzy_A 85 EPKL 88 (112)
T ss_dssp SCCC
T ss_pred CCCE
T ss_conf 9983
No 60
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=27.75 E-value=16 Score=15.05 Aligned_cols=40 Identities=13% Similarity=0.106 Sum_probs=23.3
Q ss_pred CEEEECCHHHCCCCHHHHHHHHHHHHCCCCCEEE-EECCCCCHHH
Q ss_conf 0001201233587738899999986023343067-6028420234
Q gi|254780605|r 165 RKVAMQDMAYAGRESQEKIRDICKILHQKEVGAV-FICDPSSIAW 208 (609)
Q Consensus 165 ~~i~~~~~~~aG~s~~eKi~~ir~~L~~~~~dal-iit~~d~IaW 208 (609)
.-+...|..|. . ..++.+++..+..|.+.+ ++..|..-|.
T Consensus 111 ~~ViTVPa~f~---~-~qR~~~~~Aa~~AGl~~~~li~EptAAAl 151 (509)
T 2v7y_A 111 RAVITVPAYFN---D-AQRQATKDAGRIAGLEVERIINEPTAAAL 151 (509)
T ss_dssp EEEEEECTTCC---H-HHHHHHHHHHHHTTCEEEEEEEHHHHHHH
T ss_pred EEEEEECCCCC---H-HHHHHHHHHHHHCCCCEEEEECHHHHHHH
T ss_conf 49999899899---9-99999999999869966787246899999
No 61
>1td9_A Phosphate acetyltransferase; structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.75A {Bacillus subtilis} SCOP: c.77.1.5 PDB: 1xco_A
Probab=26.25 E-value=26 Score=13.67 Aligned_cols=11 Identities=0% Similarity=-0.058 Sum_probs=5.3
Q ss_pred HCCCCCEEEEE
Q ss_conf 02334306760
Q gi|254780605|r 190 LHQKEVGAVFI 200 (609)
Q Consensus 190 L~~~~~dalii 200 (609)
++...+|+++-
T Consensus 119 v~~G~aD~lv~ 129 (329)
T 1td9_A 119 VYKGLADGLVS 129 (329)
T ss_dssp HHTTSCSEEEE
T ss_pred HHCCCCHHEEC
T ss_conf 96557322113
No 62
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=25.57 E-value=23 Score=14.01 Aligned_cols=60 Identities=15% Similarity=0.122 Sum_probs=38.2
Q ss_pred CCHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCC-CCCCCHHHHHHHHCCCCCCEEECCCCC
Q ss_conf 01233587738899999986023343067602842023443201355-377870023322014786200035311
Q gi|254780605|r 170 QDMAYAGRESQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFD-IPCSPYPLSRAILYADGKAEIFFDKQY 243 (609)
Q Consensus 170 ~~~~~aG~s~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~D-i~~tPv~~a~aiI~~~~~~~Lfvd~~k 243 (609)
.....+...|.+=.+.+++.+. .++|+++||- |.| +.||-.+++|++ . ..+++.|+-..+
T Consensus 144 ~S~~mtp~~w~~la~~i~~~~~-~~~dGvVVtH-----------GTDTM~yTA~aLsf~l-~-~~kPVVlTGSqr 204 (435)
T 2d6f_A 144 LSENMKPEYWVETARAVYGEIK-DGADGVVVAH-----------GTDTMHYTSAALSFML-R-TPVPVVFTGAQR 204 (435)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHH-TTCSEEEEEC-----------CTTTHHHHHHHHHHHE-E-CSSCEEEECCSS
T ss_pred CCCCCCHHHHHHHHHHHHHHCC-CCCCEEEEEC-----------CCCHHHHHHHHHHHHH-C-CCCCEEEECCCC
T ss_conf 7332899999999999998523-5898799968-----------8617999999999873-6-799889968755
No 63
>2zsh_B Della protein GAI; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_B*
Probab=25.32 E-value=24 Score=13.85 Aligned_cols=38 Identities=24% Similarity=0.413 Sum_probs=19.7
Q ss_pred CC-CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 53-0188999999987543302785555410000123354322224554
Q gi|254780605|r 349 TE-IDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATV 396 (609)
Q Consensus 349 TE-~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipHY~~~~ 396 (609)
+| .++|++||++..-++.....+.-.++ +-.+||.|+.
T Consensus 38 Sdma~VAQkLEqLE~vmgn~~~d~ls~La----------sDtVHYNPSD 76 (110)
T 2zsh_B 38 SEMADVAQKLEQLEVMMSNVQEDDLSQLA----------TETVHYNPAE 76 (110)
T ss_dssp GGHHHHHHHHHHHHHHHTTC-------CH----------HHHTTSCTTB
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCHHHHC----------CCCCCCCHHH
T ss_conf 04899999999999997657731076741----------5640048688
No 64
>3kiz_A Phosphoribosylformylglycinamidine cyclo-ligase; structural genomics, joint center for structural genomics, JCSG; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=25.13 E-value=26 Score=13.69 Aligned_cols=10 Identities=30% Similarity=0.455 Sum_probs=6.4
Q ss_pred CCCCCCCCCC
Q ss_conf 5477643232
Q gi|254780605|r 478 DFAHGVGHGV 487 (609)
Q Consensus 478 dy~HgtGHGV 487 (609)
...|=||.|+
T Consensus 285 g~AHITGGGl 294 (394)
T 3kiz_A 285 GVVHCSGGGQ 294 (394)
T ss_dssp EEEECCTTGG
T ss_pred EEEECCCCCC
T ss_conf 6651267644
No 65
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=24.93 E-value=27 Score=13.51 Aligned_cols=57 Identities=12% Similarity=0.213 Sum_probs=35.0
Q ss_pred HCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCC-CCCCCHHHHHHHHCCCCCCEEECCCCC
Q ss_conf 3587738899999986023343067602842023443201355-377870023322014786200035311
Q gi|254780605|r 174 YAGRESQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFD-IPCSPYPLSRAILYADGKAEIFFDKQY 243 (609)
Q Consensus 174 ~aG~s~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~D-i~~tPv~~a~aiI~~~~~~~Lfvd~~k 243 (609)
.+...|.+=.++|++.+...++|+++|+- |.| +.||-.++++ ++.. ++++.|+-..+
T Consensus 70 m~~~~w~~la~~I~~~~~~~~~dG~VVtH-----------GTDTm~yTA~~Lsl-l~~~-~kPVVlTGSqr 127 (337)
T 4pga_A 70 ITNDDLLKLGKRVAELADSNDVDGIVITH-----------GTDTLEETAYFLNL-VQKT-DKPIVVVGSMR 127 (337)
T ss_dssp CCHHHHHHHHHHHHHHHHCTTCSEEEEEC-----------CSTTHHHHHHHHHH-HCCC-CSCEEEECCSS
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEEC-----------CCCHHHHHHHHHHH-HHCC-CCCEEEECCCC
T ss_conf 79999999999999986457887699977-----------84349999999999-7557-99779936888
No 66
>1wsa_A Asparaginase, asparagine amidohydrolase; signal, periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=23.46 E-value=25 Score=13.75 Aligned_cols=54 Identities=20% Similarity=0.268 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCC-CCCCCHHHHHHHHCCCCCCEEECCCCC
Q ss_conf 7738899999986023343067602842023443201355-377870023322014786200035311
Q gi|254780605|r 177 RESQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFD-IPCSPYPLSRAILYADGKAEIFFDKQY 243 (609)
Q Consensus 177 ~s~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~D-i~~tPv~~a~aiI~~~~~~~Lfvd~~k 243 (609)
..|.+=.+.|++.+...+.|+++|+- |.| +.||-.++++++= +.+++.|+-..+
T Consensus 66 ~~w~~la~~I~~~~~~~~~dGiVVtH-----------GTDTm~~TA~~Ls~~l~--~~kPVVlTGa~~ 120 (330)
T 1wsa_A 66 KVWLKLAKRVNELLAQKETEAVIITH-----------GTDTMEETAFFLNLTVK--SQKPVVLVGAMR 120 (330)
T ss_dssp HHHHHHHHHHHHHHHSTTCCCEEEEC-----------CSSSHHHHHHHHHHHCC--CSSCEEEECCSS
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEC-----------CCCHHHHHHHHHHHHHC--CCCCEEEECCCC
T ss_conf 99999999999874357876699977-----------84359999999998606--799889955763
No 67
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=23.28 E-value=29 Score=13.30 Aligned_cols=25 Identities=12% Similarity=0.258 Sum_probs=18.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 278555541000012335432-222455
Q gi|254780605|r 369 RNPLRDIAFNTIAASGPHAAI-IHYQAT 395 (609)
Q Consensus 369 ~~~~~~~SF~TIva~G~N~Ai-pHY~~~ 395 (609)
..+-.+.|| ++|+|.|... ||||+.
T Consensus 355 G~NP~~~Sy--V~G~G~n~p~~pHHR~a 380 (605)
T 1tf4_A 355 GDNPRNSSY--VVGFGNNPPRNPHHRTA 380 (605)
T ss_dssp TCSTTCCCS--BTTSSSSCCSCCSCHHH
T ss_pred CCCCCCCCC--EECCCCCCCCCCCCCCC
T ss_conf 059899578--75568998899857354
No 68
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, unknown function; NMR {Nostoc SP}
Probab=23.10 E-value=21 Score=14.33 Aligned_cols=17 Identities=24% Similarity=0.468 Sum_probs=9.4
Q ss_pred ECCCEEECCCCCEEEEEE
Q ss_conf 468603568752150025
Q gi|254780605|r 516 NEPGYYRCGAFGIRIENV 533 (609)
Q Consensus 516 ~EPG~Y~~g~~GiRIEn~ 533 (609)
+.||.|+. ||-||+|-+
T Consensus 71 i~pG~~lQ-WyaVRLEK~ 87 (94)
T 2krx_A 71 VGAGKYLQ-WYAVRLEKL 87 (94)
T ss_dssp EETTEEEE-EEECCCCCS
T ss_pred ECCCCEEE-EEEEEEEEH
T ss_conf 16998889-998750311
No 69
>2hqn_A Putative transcriptional regulator; phosporylation-independent response regulator, signaling protein; NMR {Helicobacter pylori J99}
Probab=22.15 E-value=31 Score=13.15 Aligned_cols=71 Identities=11% Similarity=0.123 Sum_probs=39.7
Q ss_pred EEEECCEE--CCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHCCCC
Q ss_conf 89965634--1399999999985334761997050011122012763322000120123358773889999998602334
Q gi|254780605|r 117 RLGLDSRL--HSSFEVDLLQKSLDKIEGVIVDVPYNPIDSLWKDRPQRLYRKVAMQDMAYAGRESQEKIRDICKILHQKE 194 (609)
Q Consensus 117 ~IG~Dp~l--~s~~~~~~l~~~l~~~~~~l~~~~~NlVD~iW~~rP~~~~~~i~~~~~~~aG~s~~eKi~~ir~~L~~~~ 194 (609)
++-++++. .|..+++-|.--+.+.+ ..+. .+.|++.+|.... ..+..+...-|.+||++|++.+
T Consensus 20 ~v~~~~~~v~Lt~~E~~lL~~L~~~~g-~vvs-r~~L~~~vw~~~~------------~~~~~~l~~~I~rLRkkl~~~~ 85 (109)
T 2hqn_A 20 KIIYKGREVEVKGKPFEVLTHLARHRD-QIVS-KEQLLDAIWEEPE------------MVTPNVIEVAINQIRQKMDKPL 85 (109)
T ss_dssp EEEETTEEEECCCSTHHHHHHHHHHTC-SEEE-HHHHHHHHCCSCG------------GGCTTHHHHHHHHHHHHTTTTS
T ss_pred EEEECCEEEECCHHHHHHHHHHHHCCC-CCCC-HHHHHHHHCCCCC------------CCCCCHHHHHHHHHHHHHHCCC
T ss_conf 999999999649999999999996799-9878-9999998609777------------7674409999999999860559
Q ss_pred CEEEEEC
Q ss_conf 3067602
Q gi|254780605|r 195 VGAVFIC 201 (609)
Q Consensus 195 ~daliit 201 (609)
...++.|
T Consensus 86 ~~~~I~T 92 (109)
T 2hqn_A 86 GISTVET 92 (109)
T ss_dssp CCCCEEE
T ss_pred CCCEEEE
T ss_conf 9985999
No 70
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=21.33 E-value=32 Score=13.04 Aligned_cols=58 Identities=16% Similarity=0.161 Sum_probs=37.4
Q ss_pred HHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCC-CCCCCHHHHHHHHCCCCCCEEECCCCC
Q ss_conf 33587738899999986023343067602842023443201355-377870023322014786200035311
Q gi|254780605|r 173 AYAGRESQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFD-IPCSPYPLSRAILYADGKAEIFFDKQY 243 (609)
Q Consensus 173 ~~aG~s~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~D-i~~tPv~~a~aiI~~~~~~~Lfvd~~k 243 (609)
..+...|.+=.+.|++.+...+.|+++|+- |.| +.||-.++++++ . +.+++.|+-..+
T Consensus 64 ~m~~~~w~~la~~i~~~~~~~~~dG~VVtH-----------GTDTm~~TA~~Ls~~l-~-~~kPVVlTGaq~ 122 (332)
T 2wlt_A 64 DMNEEIWFKLAQRAQELLDDSRIQGVVITH-----------GTDTLEESAYFLNLVL-H-STKPVVLVGAMR 122 (332)
T ss_dssp GCCHHHHHHHHHHHHHHHTSTTCCEEEEEC-----------CSSSHHHHHHHHHHHC-C-CSSCEEEECCSS
T ss_pred HCCHHHHHHHHHHHHHHHCCCCCCEEEEEC-----------CCCHHHHHHHHHHHHH-C-CCCCEEEECCCC
T ss_conf 589999999999999984058988699977-----------8617999999999986-4-799779968997
No 71
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=20.80 E-value=33 Score=12.96 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=14.5
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCCCHHCHHHHHHCC
Q ss_conf 999999749979996088874786066710610044146
Q gi|254780605|r 21 LRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGF 59 (609)
Q Consensus 21 LR~~m~~~~idayiip~~D~h~sEyv~~~~~rl~~isGF 59 (609)
|.+.++++|++++..|--+. ++++.-+..+..+..|
T Consensus 16 l~~~L~~~G~~~~~~Pli~i---~~~~~~~~~l~~l~~~ 51 (240)
T 3mw8_A 16 MASALDALAIPYLVEPLLSV---EAAAVTQAQLDELSRA 51 (240)
T ss_dssp HHHHHHHHTCCEEECCSCEE---EECCCCHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEECCEEE---EECCCHHHHHHHHCCC
T ss_conf 99999988995999477666---7240309998520248
No 72
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural protein; 1.90A {Thermoplasma acidophilum dsm 1728} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=20.66 E-value=33 Score=12.94 Aligned_cols=20 Identities=30% Similarity=0.361 Sum_probs=13.7
Q ss_pred ECCCCEEEEECCCCEECCCCCCEE
Q ss_conf 038987998303201056122214
Q gi|254780605|r 402 LQKDELLLLDSGAQYVNGTTDITR 425 (609)
Q Consensus 402 i~~~~~~LiDsG~qY~~GtTDiTR 425 (609)
.+++.+++||.|| ||||++-
T Consensus 187 ~~~~~~lviDiG~----gTtdv~v 206 (346)
T 2fsj_A 187 QQPGYGVVIDVGS----RTTDVLT 206 (346)
T ss_dssp CCSSEEEEEEECS----SCEEEEE
T ss_pred CCCCCEEEEEECC----CEEEEEE
T ss_conf 5777389999089----9189999
Done!