RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254780605|ref|YP_003065018.1| putative aminopeptidase [Candidatus Liberibacter asiaticus str. psy62] (609 letters) >gnl|CDD|37624 KOG2413, KOG2413, KOG2413, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]. Length = 606 Score = 458 bits (1181), Expect = e-129 Identities = 223/602 (37%), Positives = 342/602 (56%), Gaps = 23/602 (3%) Query: 21 LRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTGSAGIAIVLRQKSVIFVDGR 80 LR S +DA+++P D ++ E++ ER A+LSGF+GSAG A++ +++ ++ DGR Sbjct: 15 LRELMKSPPIDAYILPSTDAHQSEYIADRDERRAFLSGFSGSAGTAVITEEEAALWTDGR 74 Query: 81 YTLQVEKEVDTALFTIK-NIAIEPLHAWISEHGFVGLRLGLDSRLHSSFEVDLLQKSLDK 139 Y Q E+++D+ +K + + W+++ G R+G+D L S L+KSL Sbjct: 75 YFQQAEQQLDSNWTLMKMGEDVPTVEEWLAKVLPEGSRVGIDPTLISFDAWKQLEKSLTS 134 Query: 140 IEGVIVDVPYNPIDSLWKDRPQRLYRKVAMQDMAYAGRESQEKIRDICKILHQKEVGAVF 199 +V +P N +D +W DRP+R V + D+ +AG +K+ ++ K L +K+ A Sbjct: 135 KGLELVPIPGNLVDEIWGDRPERPGNPVIVLDLEFAGLSVDDKVDNLRKKLKEKKCDAFV 194 Query: 200 ICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKALLSAVAI-V 258 + IAW+ N+RG DIP +P S AI+ D + +F D ++++ K L + + Sbjct: 195 VTALDEIAWLLNLRGSDIPYNPVFYSYAIITMD-EIFLFVDNSKLSDESKKHLREDGVEI 253 Query: 259 LDMDMM--DSRLVCLARTSMPILIDPKWISYRFFKVIAQKNGVMVEGSDPSCLLRATKNK 316 D + D + A I I P+ +Y ++I + + M++ S P +A KN Sbjct: 254 RPYDQIWSDIKNWASAFADKKIWISPE-TNYGIGELIGEDH-SMIDPS-PISRAKAIKND 310 Query: 317 VEIEGMQTAHIQDGVAMVYFLFWF--YSQSLETITEIDIIKKLERCREEIGCKMRNPLRD 374 E++GM+ +HI+DG A+V + W TITE D KLE R ++ Sbjct: 311 DELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFR-----SRQDHFMG 365 Query: 375 IAFNTIAAS-GPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVD 433 ++F TI++S GP+ A+IHY ++NR++ D++ L DSGAQY++GTTD+TRT+ G+ Sbjct: 366 LSFETISSSVGPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPT 425 Query: 434 YEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGADFAHGVGHGVGSFLPV 493 E+K +TLVLKG I+++ A FP+ T+G LD++AR LWK G D+ HG GHGVGSFL V Sbjct: 426 AEEKEAYTLVLKGHIALARAVFPKGTKGSVLDALARSALWKAGLDYGHGTGHGVGSFLNV 485 Query: 494 HEGPQGISR---TNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSEPETINNGECLML 550 HEGP GI ++ PL GM+ S EPGYY+ G FGIRIENV+ V + T +N L Sbjct: 486 HEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYKDGEFGIRIENVVEVVDAGTKHNFRGF-L 544 Query: 551 GFNTLTLCPIDRKLILVELLTNEEKKWCNDYHRRVYTSLAPLIE---DQEVLSWLFSVTA 607 F LTL P KLI LL+ EE W N+YH +V + + P ++ E WL + T Sbjct: 545 TFEPLTLVPYQTKLIDKSLLSEEEINWLNEYHAKVRSKIGPELQKEGRMEEYKWLINATQ 604 Query: 608 PI 609 PI Sbjct: 605 PI 606 >gnl|CDD|29970 cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.. Length = 224 Score = 297 bits (762), Expect = 6e-81 Identities = 119/229 (51%), Positives = 154/229 (67%), Gaps = 8/229 (3%) Query: 321 GMQTAHIQDGVAMVYFLFWFYSQ--SLETITEIDIIKKLERCREEIGCKMRNPLRDIAFN 378 GM+ AHI+DGVA+V FL W + ETITE+ KLE R + + ++F+ Sbjct: 1 GMRAAHIRDGVALVEFLAWLEQEVPKGETITELSAADKLEEFRRQ-----QKGYVGLSFD 55 Query: 379 TIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKY 438 TI+ GP+ AI+HY T +SNR + D L L+DSG QY++GTTDITRT+ +G+ E+K Sbjct: 56 TISGFGPNGAIVHYSPTEESNRKISPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKR 115 Query: 439 YFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGADFAHGVGHGVGSFLPVHEGPQ 498 +TLVLKG I+++ A+FP+ T G LD++AR LWK G D+ HG GHGVGSFL VHEGPQ Sbjct: 116 DYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYGHGTGHGVGSFLNVHEGPQ 175 Query: 499 GIS-RTNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSEPETINNGE 546 IS N PL GMILSNEPGYY+ G +GIRIEN++ V E ET G Sbjct: 176 SISPAPNNVPLKAGMILSNEPGYYKEGKYGIRIENLVLVVEAETTEFGG 224 >gnl|CDD|30356 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]. Length = 384 Score = 207 bits (527), Expect = 9e-54 Identities = 117/414 (28%), Positives = 190/414 (45%), Gaps = 47/414 (11%) Query: 171 DMAYAGRESQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILY 230 + +A E + ++ + +++ + + A+ + PS+ ++ GFD L ++ Sbjct: 2 ALRFADEEYRARLARLRELMEEAGLDALLLTSPSNFYYLT---GFDAFGF-ERLQALLVP 57 Query: 231 ADGKAEIFFDKQYIN---EQLKALLSAVAIVLD-------MDMMDSRLVCLARTSMPILI 280 A+G+ +F + E L V + D +D++ + L L I I Sbjct: 58 AEGEPVLFVRGRDEEAAKETSWIKLENVEVYEDDEDPAAPLDLLGALLEELGLAGKRIGI 117 Query: 281 DPK--WISYRFFKVI--AQKNGVMVEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYF 336 + +++ F+ + A +V+ SD LR K+ EI ++ A A+ Sbjct: 118 ESASIFLTLAAFERLQAALPRAELVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAA 177 Query: 337 LFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATV 396 L +TE +I +LE + G +F+TI ASG +AA+ HY Sbjct: 178 LEAIR----PGMTEAEIAAELEYALRKGGA------EGPSFDTIVASGENAALPHYTP-- 225 Query: 397 QSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFP 456 S+R L+ +L+L+D G Y +DITRT IG E++ + VL+ + A P Sbjct: 226 -SDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRP 284 Query: 457 QRTRGCDLDSIARIFLWK--YGADFAHGVGHGVGSFLPVHEGPQGISRTNQEPLLPGMIL 514 T G ++D+ AR L K YG F HG GHGVG L VHE PQ +S + L PGM+ Sbjct: 285 GVT-GGEVDAAARQVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLSPGSDTTLEPGMVF 343 Query: 515 SNEPGYYRCGAFGIRIENVLCVSEPETINNGECLMLGFNTLTLCPIDRKLILVE 568 S EPG Y G G+RIE+ + V+E GF LT P ++L+++E Sbjct: 344 SIEPGIYIPGGGGVRIEDTVLVTED-----------GFEVLTRVP--KELLVIE 384 Score = 29.3 bits (65), Expect = 3.2 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 23/146 (15%) Query: 30 MDAFLVPRVDEYRGE-----FVDKGSERLAWLSGFT-----GSAGIAIVLRQKSVIFVDG 79 + R+ E E + +L+GF + + + V+FV G Sbjct: 9 EYRARLARLRELMEEAGLDALLLTSPSNFYYLTGFDAFGFERLQALLVPAEGEPVLFVRG 68 Query: 80 RYTLQVEKEVDTALFTI--------KNIAIEPLHAWISEHGFVGLRLGLDSRLH--SSFE 129 R ++ L + ++ L A + E G G R+G++S + Sbjct: 69 RDEEAAKETSWIKLENVEVYEDDEDPAAPLDLLGALLEELGLAGKRIGIESASIFLTLAA 128 Query: 130 VDLLQKSLDKIEGVIVDVPYNPIDSL 155 + LQ +L + E +VD + +D L Sbjct: 129 FERLQAALPRAE--LVDAS-DLVDRL 151 >gnl|CDD|144226 pfam00557, Peptidase_M24, Metallopeptidase family M24. This family contains metallopeptidases. It also contains non-peptidase homologues such as the N terminal domain of Spt16 which is a histone H3-H4 binding module. Length = 207 Score = 161 bits (409), Expect = 6e-40 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 18/222 (8%) Query: 320 EGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNT 379 E M+ A A+ L +TE ++ +LE R R AF Sbjct: 1 ELMRKAARIAAAALEAALAAIR----PGVTERELAAELEEA-----FLARGGARGPAFPP 51 Query: 380 IAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYY 439 I ASGP+AA+ HY S+R+L+ +L+L+D GA+Y +DITRT +G E++ Sbjct: 52 IVASGPNAAVPHYIP---SDRVLKDGDLVLIDVGAEYDGYHSDITRTFVVGKPTPEQREL 108 Query: 440 FTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYG-ADFAHGVGHGVGSFLPVH-EGP 497 + VL+ + A P G D+D+ AR L + G F HG+GHG+G L VH EGP Sbjct: 109 YEAVLEAQEAAIAAVKP-GVTGGDVDAAAREVLEEGGYGVFPHGLGHGIG--LDVHDEGP 165 Query: 498 QGISRTNQEPLLPGMILSNEPGYYRC-GAFGIRIENVLCVSE 538 IS + L PGM+ + EPG Y G G+RIE+ + V+E Sbjct: 166 YIISGGSDRVLEPGMVFTIEPGIYFIPGWGGVRIEDTVLVTE 207 >gnl|CDD|29977 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.. Length = 208 Score = 137 bits (347), Expect = 7e-33 Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 15/202 (7%) Query: 339 WFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQS 398 +TE ++ +LE ++G +F+TI ASGP++A+ H S Sbjct: 17 ELLEFIKPGMTEREVAAELEYFMRKLGA------EGPSFDTIVASGPNSALPHGVP---S 67 Query: 399 NRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQR 458 +R +++ +L+L+D GA Y +DITRT+A+G+ E K + +VL+ + A P Sbjct: 68 DRKIEEGDLVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPG- 126 Query: 459 TRGCDLDSIARIFLWK--YGADFAHGVGHGVGSFLPVHEGPQGISRTNQEPLLPGMILSN 516 ++D AR + + YG F H GHGVG L VHE P IS + + L GM+ + Sbjct: 127 VTAKEVDKAARDVIEEAGYGEYFIHRTGHGVG--LEVHEAPY-ISPGSDDVLEEGMVFTI 183 Query: 517 EPGYYRCGAFGIRIENVLCVSE 538 EPG Y G G+RIE+ + V+E Sbjct: 184 EPGIYIPGKGGVRIEDDVLVTE 205 >gnl|CDD|29969 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.. Length = 207 Score = 94.8 bits (235), Expect = 7e-20 Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 20/222 (9%) Query: 319 IEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFN 378 I ++ A AM +TE ++ I +R A Sbjct: 1 IARLRKAAEIAEAAMAAAAEAIR----PGVTEAEV-------AAAIEQALRAAGGYPAGP 49 Query: 379 TIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKY 438 TI SG A+ HY+ +R LQ+ +L+L+D G Y D+TRT IG+ E++ Sbjct: 50 TIVGSGARTALPHYRPD---DRRLQEGDLVLVDLGGVYDGYHADLTRTFVIGEPSDEQRE 106 Query: 439 YFTLVLKGMISVSTARFPQRTRGCDLDSIARIFL--WKYGADFAHGVGHGVGSFLPVHEG 496 + V + + A P ++D+ AR L G +F H GHG+G L +HE Sbjct: 107 LYEAVREAQEAALAALRP-GVTAEEVDAAAREVLEEHGLGPNFGHRTGHGIG--LEIHEP 163 Query: 497 PQGISRTNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSE 538 P + + L PGM+ + EPG Y G G+RIE+ + V+E Sbjct: 164 P-VLKAGDDTVLEPGMVFAVEPGLYLPGGGGVRIEDTVLVTE 204 >gnl|CDD|29972 cd01087, Prolidase, Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.. Length = 243 Score = 79.8 bits (197), Expect = 2e-15 Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 38/202 (18%) Query: 374 DIAFNTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAI-GDV 432 +A++ I A+G +AAI+HY V +++ L+ +L+L+D+GA+Y +DITRT + G Sbjct: 45 RLAYSYIVAAGSNAAILHY---VHNDQPLKDGDLVLIDAGAEYGGYASDITRTFPVNGKF 101 Query: 433 DYEKKYYFTLVLKG----------------MISVSTARFPQRTRGCDL---DSIARIFLW 473 E++ + VL + ++ + + + D + Sbjct: 102 TDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESG 161 Query: 474 KYGADFAHGVGHGVGSFLPVH--EGPQGISRTNQEPLLPGMILSNEPGYYRCGAF----- 526 Y F HG+GH +G L VH G R + PL PGM+++ EPG Y Sbjct: 162 AYAKFFPHGLGHYLG--LDVHDVGGYLRYLRRAR-PLEPGMVITIEPGIYFIPDLLDVPE 218 Query: 527 -----GIRIENVLCVSEPETIN 543 GIRIE+ + V+E N Sbjct: 219 YFRGGGIRIEDDVLVTEDGPEN 240 >gnl|CDD|144790 pfam01321, Creatinase_N, Creatinase/Prolidase N-terminal domain. This family includes the N-terminal non-catalytic domains from creatinase and prolidase. The exact function of this domain is uncertain. Length = 127 Score = 68.1 bits (167), Expect = 6e-12 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 18/133 (13%) Query: 17 RVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFTGSAGIAIVL-RQKSVI 75 R+ LR G+DA L+ E + +L+GFTGS G+A+V+ + + Sbjct: 1 RLERLRELMAEAGLDALLLTS------------PENIRYLTGFTGSRGLALVVTADGATL 48 Query: 76 FVD-GRYTLQVEKEVDTALFTIKNIAIEPLHAWISEHGFVGLRLGLDSRLHSSFEVDLLQ 134 D RYT E+ +D + + E L + E G RLG + + E + L+ Sbjct: 49 LTDALRYTEAAEESLDEEIIEYDD--AEALADLLKELGLELKRLGFEGDHLTVAEYERLK 106 Query: 135 KSLDKIEGVIVDV 147 ++L E +VD Sbjct: 107 EALPDAE--LVDA 117 >gnl|CDD|37948 KOG2737, KOG2737, KOG2737, Putative metallopeptidase [General function prediction only]. Length = 492 Score = 67.7 bits (165), Expect = 9e-12 Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 37/190 (19%) Query: 366 CKMRNPLRDIAFNTIAASGPHAAIIHY-QATVQSNRLLQKDELLLLDSGAQYVNGTTDIT 424 R +++ I ASG ++A++HY A ++R +Q +L L D GA+Y +DIT Sbjct: 229 SYSYGGCRHLSYTCICASGDNSAVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDIT 288 Query: 425 RTI-AIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIA--------------- 468 + G ++K + VL +V A P D+ +A Sbjct: 289 CSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPG-VWWVDMHKLAEKVLLEHLAQMGILK 347 Query: 469 ----RIFLWKYGADF-AHGVGHGVGSFLPVHE---GPQGISRTNQ---------EPLLPG 511 + + GA F HG+GH +G L VH+ P+G+ R ++ L G Sbjct: 348 GDVDEMVEARLGAVFMPHGLGHFLG--LDVHDVGGYPEGVERPDEPGLRSLRTARHLKEG 405 Query: 512 MILSNEPGYY 521 M+++ EPG Y Sbjct: 406 MVITVEPGCY 415 >gnl|CDD|37625 KOG2414, KOG2414, KOG2414, Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]. Length = 488 Score = 61.9 bits (150), Expect = 5e-10 Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 37/204 (18%) Query: 363 EIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTD 422 E C+ R R A+ + A G +A IHY V++N+LL+ DE++L+D+G + +D Sbjct: 269 EYECRRRGADRL-AYPPVVAGGKNANTIHY---VRNNQLLKDDEMVLVDAGCELGGYVSD 324 Query: 423 ITRTIAIGDV--DYEKKYYFTLV-----------------LKGMISVSTARFPQRTRGCD 463 ITRT I D ++ Y ++ L + S Q + Sbjct: 325 ITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELG 384 Query: 464 LDSIARIFLWKYGADFAHGVGHGVGSFLPVHEGPQGISRTNQEPLLPGMILSNEPGYY-- 521 + R + + H VGH +G + VH+ P +SR PL PGM+++ EPG Y Sbjct: 385 IRKTDREEMIQAEKLCPHHVGHYLG--MDVHDCPT-VSRD--IPLQPGMVITIEPGVYIP 439 Query: 522 -------RCGAFGIRIENVLCVSE 538 GIRIE+ + + E Sbjct: 440 EDDDPPEEFRGIGIRIEDDVAIGE 463 >gnl|CDD|30374 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]. Length = 255 Score = 45.2 bits (107), Expect = 5e-05 Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 17/179 (9%) Query: 347 TITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDE 406 T E+D I + E RE+ + F S + + H ++L++ + Sbjct: 37 TTLELDEIAE-EFIREKGAYPAFLGYKGFPF-PTCIS-VNEVVAHG--IPGDKKVLKEGD 91 Query: 407 LLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKG--MISVSTARFPQRTR--GC 462 ++ +D GA D T +G+V E K + + R G Sbjct: 92 IVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGR 151 Query: 463 DLDSIARIFLWKYGADFAHGVGHGVGSFLPVHEGPQ--GISRTNQEPLL-PGMILSNEP 518 + A + + GHG+G L HE P + L GM+ + EP Sbjct: 152 AIQEYAESRGFSVVRNL---TGHGIGREL--HEEPSIPNYGKDGTGVRLKEGMVFAIEP 205 >gnl|CDD|29973 cd01088, MetAP2, Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.. Length = 291 Score = 30.9 bits (70), Expect = 0.94 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 10/72 (13%) Query: 348 ITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDEL 407 +T ++I + +E E+G P+ +++ N AA HY + +L++ ++ Sbjct: 26 MTLLEIAEFVENRIRELGAGPAFPV-NLSINECAA--------HYTPNAGDDTVLKEGDV 76 Query: 408 LLLDSGAQYVNG 419 + LD GA V+G Sbjct: 77 VKLDFGAH-VDG 87 >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 Score = 30.9 bits (70), Expect = 0.97 Identities = 11/22 (50%), Positives = 18/22 (81%) Query: 167 VAMQDMAYAGRESQEKIRDICK 188 VA++ M+Y+G++S EK +DI K Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIK 64 >gnl|CDD|35797 KOG0577, KOG0577, KOG0577, Serine/threonine protein kinase [Signal transduction mechanisms]. Length = 948 Score = 30.4 bits (68), Expect = 1.5 Identities = 11/22 (50%), Positives = 18/22 (81%) Query: 167 VAMQDMAYAGRESQEKIRDICK 188 VA++ M+Y+G++S EK +DI K Sbjct: 54 VAIKKMSYSGKQSNEKWQDILK 75 >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 Score = 28.9 bits (64), Expect = 4.2 Identities = 13/30 (43%), Positives = 20/30 (66%) Query: 159 RPQRLYRKVAMQDMAYAGRESQEKIRDICK 188 R R VA++ M+Y+G++S EK +DI K Sbjct: 45 RDVRTNEVVAIKKMSYSGKQSNEKWQDIIK 74 >gnl|CDD|144590 pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme. This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor. Length = 381 Score = 28.7 bits (65), Expect = 4.5 Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 31/85 (36%) Query: 286 SYRFFKVIAQKNGV---MVEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYS 342 +YR F+ + + G+ V+ SD L A I+ V+ Sbjct: 104 TYRLFEKVLPRFGIEVTFVDPSDLDAL--------------EAAIKPNTKAVFL------ 143 Query: 343 QSLETIT-----EIDIIKKLERCRE 362 ET T +DI + ++ Sbjct: 144 ---ETPTNPLLKVVDIEAIAKIAKK 165 >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 Score = 28.5 bits (63), Expect = 6.3 Identities = 11/22 (50%), Positives = 18/22 (81%) Query: 167 VAMQDMAYAGRESQEKIRDICK 188 VA++ M+Y+G++S EK +DI K Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIK 64 >gnl|CDD|32270 COG2087, CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase [Coenzyme metabolism]. Length = 175 Score = 28.3 bits (63), Expect = 6.6 Identities = 19/101 (18%), Positives = 42/101 (41%), Gaps = 14/101 (13%) Query: 81 YTLQVEKEVDTALFTIKN----IAIEPLHAWISEHGFVGLRLGLDSRLHSSFEVDLLQKS 136 T++ ++ T L + + ++ L W++ F G + + E++ L + Sbjct: 57 RTVEAPLDLATLLEALIEPGDVVLVDCLTLWVTNLLFAGEKDWSAEAAIEA-EIEALLAA 115 Query: 137 LDKIEGVIV---------DVPYNPIDSLWKDRPQRLYRKVA 168 L + G +V VP + L++D RL +++A Sbjct: 116 LSRAPGTVVLVSNEVGLGIVPEYRLGRLFRDIAGRLNQQLA 156 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.323 0.139 0.422 Gapped Lambda K H 0.267 0.0745 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 7,605,885 Number of extensions: 415868 Number of successful extensions: 822 Number of sequences better than 10.0: 1 Number of HSP's gapped: 789 Number of HSP's successfully gapped: 27 Length of query: 609 Length of database: 6,263,737 Length adjustment: 99 Effective length of query: 510 Effective length of database: 4,124,446 Effective search space: 2103467460 Effective search space used: 2103467460 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 60 (26.9 bits)