RPSBLAST alignment of GI: 254780605 and protein with PDBid: 3cb6

>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H3/H4 chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444

 Score =  155 bits (393), Expect = 3e-38
 Identities = 38/301 (12%), Positives = 93/301 (30%), Gaps = 46/301 (15%)

Query: 300 MVEGSDPSCLLRATKNKVEIEGMQTA-HIQDGVAMVYFLFWF--YSQSLETITEIDIIKK 356
           +V+ S       A K++ E+  ++ A  +   V   YF+     Y    + IT      +
Sbjct: 164 LVDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQ 223

Query: 357 LERCREEIGCKMRNPLR---------DIAFNTIAASGPHAAIIHYQATVQSNRLLQKDEL 407
           +E   +         L+         +  +  I  SG    +        ++      ++
Sbjct: 224 MESLIDNEAFFQTKSLKLGDIDLDQLEWCYTPIIQSGGSYDLKPS---AITDDRNLHGDV 280

Query: 408 LLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSI 467
           +L   G +Y +  +++ RT        E++  ++ ++     +            D+ + 
Sbjct: 281 VLCSLGFRYKSYCSNVGRTYLFDPDS-EQQKNYSFLVALQKKLFEYCRD-GAVIGDIYTK 338

Query: 468 ARIFLWK----YGADFAHGVGHGVGSFLPVHEGPQGISRTNQEPLLPGMILSNEPG---- 519
               +         +F   +G G+G  +   E    ++  N   L  GM L+   G    
Sbjct: 339 ILGLIRAKRPDLEPNFVRNLGAGIG--IEFRESSLLVNAKNPRVLQAGMTLNLSIGFGNL 396

Query: 520 ------YYRCGAFGIRIENVLCVSEPETINNGECLMLGFNTLTLCPIDRKLILVELLTNE 573
                   +   + + + + + ++                  T  P  +    +     E
Sbjct: 397 INPHPKNSQSKEYALLLIDTIQITRS-----------DPIVFTDSP--KAQGDISYFFGE 443

Query: 574 E 574
           +
Sbjct: 444 D 444