BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= gi|254780605|ref|YP_003065018.1| putative aminopeptidase [Candidatus Liberibacter asiaticus str. psy62] (609 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >gi|254780605|ref|YP_003065018.1| putative aminopeptidase [Candidatus Liberibacter asiaticus str. psy62] Length = 609 Score = 1263 bits (3269), Expect = 0.0, Method: Compositional matrix adjust. Identities = 609/609 (100%), Positives = 609/609 (100%) Query: 1 MFQSFEMKSSPSKTFERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFT 60 MFQSFEMKSSPSKTFERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFT Sbjct: 1 MFQSFEMKSSPSKTFERVHNLRSCFDSLGMDAFLVPRVDEYRGEFVDKGSERLAWLSGFT 60 Query: 61 GSAGIAIVLRQKSVIFVDGRYTLQVEKEVDTALFTIKNIAIEPLHAWISEHGFVGLRLGL 120 GSAGIAIVLRQKSVIFVDGRYTLQVEKEVDTALFTIKNIAIEPLHAWISEHGFVGLRLGL Sbjct: 61 GSAGIAIVLRQKSVIFVDGRYTLQVEKEVDTALFTIKNIAIEPLHAWISEHGFVGLRLGL 120 Query: 121 DSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDSLWKDRPQRLYRKVAMQDMAYAGRESQ 180 DSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDSLWKDRPQRLYRKVAMQDMAYAGRESQ Sbjct: 121 DSRLHSSFEVDLLQKSLDKIEGVIVDVPYNPIDSLWKDRPQRLYRKVAMQDMAYAGRESQ 180 Query: 181 EKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFD 240 EKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFD Sbjct: 181 EKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFD 240 Query: 241 KQYINEQLKALLSAVAIVLDMDMMDSRLVCLARTSMPILIDPKWISYRFFKVIAQKNGVM 300 KQYINEQLKALLSAVAIVLDMDMMDSRLVCLARTSMPILIDPKWISYRFFKVIAQKNGVM Sbjct: 241 KQYINEQLKALLSAVAIVLDMDMMDSRLVCLARTSMPILIDPKWISYRFFKVIAQKNGVM 300 Query: 301 VEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERC 360 VEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERC Sbjct: 301 VEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERC 360 Query: 361 REEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGT 420 REEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGT Sbjct: 361 REEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGT 420 Query: 421 TDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGADFA 480 TDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGADFA Sbjct: 421 TDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGADFA 480 Query: 481 HGVGHGVGSFLPVHEGPQGISRTNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSEPE 540 HGVGHGVGSFLPVHEGPQGISRTNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSEPE Sbjct: 481 HGVGHGVGSFLPVHEGPQGISRTNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSEPE 540 Query: 541 TINNGECLMLGFNTLTLCPIDRKLILVELLTNEEKKWCNDYHRRVYTSLAPLIEDQEVLS 600 TINNGECLMLGFNTLTLCPIDRKLILVELLTNEEKKWCNDYHRRVYTSLAPLIEDQEVLS Sbjct: 541 TINNGECLMLGFNTLTLCPIDRKLILVELLTNEEKKWCNDYHRRVYTSLAPLIEDQEVLS 600 Query: 601 WLFSVTAPI 609 WLFSVTAPI Sbjct: 601 WLFSVTAPI 609 >gi|254781053|ref|YP_003065466.1| dihydrolipoamide dehydrogenase [Candidatus Liberibacter asiaticus str. psy62] Length = 466 Score = 25.0 bits (53), Expect = 3.5, Method: Compositional matrix adjust. Identities = 10/39 (25%), Positives = 18/39 (46%) Query: 513 ILSNEPGYYRCGAFGIRIENVLCVSEPETINNGECLMLG 551 ++ P Y C +++N + + E E G CL +G Sbjct: 7 VVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNIG 45 >gi|254781062|ref|YP_003065475.1| putative aminotransferase involved in iron-sulfur cluster biogenesis [Candidatus Liberibacter asiaticus str. psy62] Length = 406 Score = 25.0 bits (53), Expect = 3.7, Method: Compositional matrix adjust. Identities = 14/79 (17%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Query: 183 IRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQ 242 I++IC+I H++ + + S+ +++ DI C Y ++ LY + K+ Sbjct: 183 IKEICRIAHERNIPVLVDGSQGSVHNFVDVQ--DIDCDWYIITGHKLYGPSGIGGLYSKE 240 Query: 243 YINEQLKALLSAVAIVLDM 261 ++ + ++ D+ Sbjct: 241 SRLNEMDPFMGGSEMIADV 259 >gi|255764478|ref|YP_003065205.2| aminopeptidase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 418 Score = 25.0 bits (53), Expect = 4.0, Method: Compositional matrix adjust. Identities = 10/16 (62%), Positives = 13/16 (81%) Query: 465 DSIARIFLWKYGADFA 480 DS A + L+KYGAD+A Sbjct: 69 DSEATLMLYKYGADYA 84 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.323 0.139 0.422 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 392,134 Number of Sequences: 1233 Number of extensions: 16567 Number of successful extensions: 34 Number of sequences better than 100.0: 5 Number of HSP's better than 100.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 30 Number of HSP's gapped (non-prelim): 6 length of query: 609 length of database: 328,796 effective HSP length: 79 effective length of query: 530 effective length of database: 231,389 effective search space: 122636170 effective search space used: 122636170 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 41 (20.4 bits)