HHsearch alignment for GI: 254780606 and conserved domain: COG1125
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].
Probab=93.01 E-value=0.37 Score=26.91 Aligned_cols=155 Identities=21% Similarity=0.390 Sum_probs=77.2
Q ss_pred HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCC------CEEC---CC-----CCCCCEEEEEEECH
Q ss_conf 0114846997078753447999999999985680110799972342------1000---12-----57752000044441
Q gi|254780606|r 409 LANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKM------LELS---VY-----DGIPHLLTPVVTNP 474 (744)
Q Consensus 409 l~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~------~~~~---~~-----~~~ph~~~~v~~~~ 474 (744)
T Consensus 24 I~~gef~vliGpSGsGKTTtLk-MINrLi---ept~G~-I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~T--v~eNI 96 (309)
T COG1125 24 IEEGEFLVLIGPSGSGKTTTLK-MINRLI---EPTSGE-ILIDGEDISDLDPVELRRKIGYVIQQIGLFPHLT--VAENI 96 (309)
T ss_pred ECCCEEEEEECCCCCCHHHHHH-HHHCCC---CCCCCE-EEECCEECCCCCHHHHHHHHHHHHHHCCCCCCCC--HHHHH
T ss_conf 6597289998789975787999-996055---888853-8989904465888999875335422215677635--98778
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHCCCCCHHHHHHHHHHHHCCCCCCCC---CCCCCCCEEEEEHHH-HHHHHHHCCHHH
Q ss_conf 787689999998667699-999980778679999988642026776665---432338679998445-687675310358
Q gi|254780606|r 475 KKAVMALKWAVREMEERY-RKMSHLSVRNIKSYNERISTMYGEKPQGCG---DDMRPMPYIVIIVDE-MADLMMVAGKEI 549 (744)
Q Consensus 475 ~~~~~~l~~~~~em~~r~-~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~---~~~~~~p~ivvviDE-~a~l~~~~~~~~ 549 (744)
T Consensus 97 a~VP~L~~w~k~~i~~r~~ELl~lvgL~-p~~~~~RyP~eLSGGQQQRVGv~RALAadP~il-LMDEPFgALDpI~R~~l 174 (309)
T COG1125 97 ATVPKLLGWDKERIKKRADELLDLVGLD-PSEYADRYPHELSGGQQQRVGVARALAADPPIL-LMDEPFGALDPITRKQL 174 (309)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHCCC-HHHHHHCCCHHCCCCHHHHHHHHHHHHCCCCEE-EECCCCCCCCHHHHHHH
T ss_conf 7615541779899999999999984989-789732092221862135888999974198868-63488554476549999
Q ss_pred HHHHHHHHHHHHCCEEEEEEEECCCC
Q ss_conf 99999999964201358999851654
Q gi|254780606|r 550 EGAIQRLAQMARAAGIHLIMATQRPS 575 (744)
Q Consensus 550 e~~~~~la~~~ra~GihlilatQrp~ 575 (744)
T Consensus 175 Q~e---~~~lq~~l~kTivfVTHDid 197 (309)
T COG1125 175 QEE---IKELQKELGKTIVFVTHDID 197 (309)
T ss_pred HHH---HHHHHHHHCCEEEEEECCHH
T ss_conf 999---99999985987999935788