HHsearch alignment for GI: 254780606 and conserved domain: COG1474

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=96.92  E-value=0.0012  Score=44.07  Aligned_cols=158  Identities=16%  Similarity=0.270  Sum_probs=69.3

Q ss_pred             CC-CEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             48-46997078753447999999999985680110799972342100012577520000444417876899999986676
Q gi|254780606|r  412 MP-HILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSVYDGIPHLLTPVVTNPKKAVMALKWAVREMEE  490 (744)
Q Consensus       412 ~P-H~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~~~~~ph~~~~v~~~~~~~~~~l~~~~~em~~  490 (744)
T Consensus        41 ~p~n~~iyG~~GTGKT~~~~~v~~~l-~~~~~~~~-~~yINc~----------------~~~t~~~i~~~i~---~~~~-   98 (366)
T COG1474          41 RPSNIIIYGPTGTGKTATVKFVMEEL-EESSANVE-VVYINCL----------------ELRTPYQVLSKIL---NKLG-   98 (366)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH-HHHCCCCC-EEEEEEE----------------ECCCHHHHHHHHH---HHHC-
T ss_conf             98607998899987328999999999-73315675-7999513----------------0787879999999---9826-


Q ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEE
Q ss_conf             99999980778679999988642026776665432338679998445687675310358999999999642013589998
Q gi|254780606|r  491 RYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAGKEIEGAIQRLAQMARAAGIHLIMA  570 (744)
Q Consensus       491 r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~~~~e~~~~~la~~~ra~Gihlila  570 (744)
T Consensus        99 ---~~p~~g~~~~~~~~~l~~~~~~-----------~~~~~IvvLDEid~L~~~~~-~~LY~L~r~~~~~-~~~v~vi~i  162 (366)
T COG1474          99 ---KVPLTGDSSLEILKRLYDNLSK-----------KGKTVIVILDEVDALVDKDG-EVLYSLLRAPGEN-KVKVSIIAV  162 (366)
T ss_pred             ---CCCCCCCCHHHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHCCCC-CHHHHEECCCCCC-CEEEEEEEE
T ss_conf             ---8997676326899999997774-----------18759999764765415464-1455111247767-537999997


Q ss_pred             ECCCC-CCCCHHHHHHCCC-CEEEEECCCHHHCCHHCCC
Q ss_conf             51654-4441467885056-3057203681110032676
Q gi|254780606|r  571 TQRPS-VDVITGTIKANFP-IRISFQVTSKIDSRTILGE  607 (744)
Q Consensus       571 tQrp~-~~vi~~~ik~n~~-~ri~~~v~~~~dsr~il~~  607 (744)
T Consensus       163 ~n~~~~~~~ld~rv~s~l~~~~I~F~pY~a~el~~Il~~  201 (366)
T COG1474         163 SNDDKFLDYLDPRVKSSLGPSEIVFPPYTAEELYDILRE  201 (366)
T ss_pred             ECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH
T ss_conf             354889998756676506876355289898999999999