HHsearch alignment for GI: 254780606 and conserved domain: PRK00091
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.
Probab=93.62 E-value=0.33 Score=27.30 Aligned_cols=67 Identities=27% Similarity=0.433 Sum_probs=39.4
Q ss_pred HHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCC----CCEE-------CCCCCCCCEEEEEEECHHHHH
Q ss_conf 11484699707875344799999999998568011079997234----2100-------012577520000444417876
Q gi|254780606|r 410 ANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPK----MLEL-------SVYDGIPHLLTPVVTNPKKAV 478 (744)
Q Consensus 410 ~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k----~~~~-------~~~~~~ph~~~~v~~~~~~~~ 478 (744)
T Consensus 2 ~~~~ii~i~GpTasGKs~la~----~la~~~---~~eIIsaDS~QvYk~l~IgTakps~~e~~~i~Hhli~~~~-~~e~~ 73 (304)
T PRK00091 2 MKPKLIVLVGPTASGKTALAI----ELAKRL---NGEIISVDSMQVYRGMDIGTAKPTAEELAGVPHHLIDILD-PTESY 73 (304)
T ss_pred CCCCEEEEECCCCCCHHHHHH----HHHHHC---CCEEEEECHHHHHCCCCEEECCCCHHHHCCCCCEEEEEEC-CCCCE
T ss_conf 999779998988658999999----999987---9989941268874999868899999998189812434565-88754
Q ss_pred HHHHHH
Q ss_conf 899999
Q gi|254780606|r 479 MALKWA 484 (744)
Q Consensus 479 ~~l~~~ 484 (744)
T Consensus 74 sv~~f~ 79 (304)
T PRK00091 74 SAADFQ 79 (304)
T ss_pred EHHHHH
T ss_conf 499999