HHsearch alignment for GI: 254780606 and conserved domain: PRK00411
>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=97.92 E-value=3.6e-05 Score=54.48 Aligned_cols=268 Identities=15% Similarity=0.199 Sum_probs=129.0
Q ss_pred HCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCC--EECCCCCCCCEE-EEEEECHHHHHHHHHHHHHH
Q ss_conf 148469970787534479999999999856801107999723421--000125775200-00444417876899999986
Q gi|254780606|r 411 NMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKML--ELSVYDGIPHLL-TPVVTNPKKAVMALKWAVRE 487 (744)
Q Consensus 411 ~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~--~~~~~~~~ph~~-~~v~~~~~~~~~~l~~~~~e 487 (744)
T Consensus 54 ~~~n~~I~G~pGTGKT~~vk~v~~~l~-~-~~~~~~~vyINc~~~~t~~~i~~~i~~~L~~~~~p--------------- 116 (394)
T PRK00411 54 RPSNVLILGPPGTGKTTTVKKVFEELE-E-AALKVVYVYINCQIDRTRYAILSEIARSLFGHPPP--------------- 116 (394)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHH-H-HCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC---------------
T ss_conf 998479988999989999999999999-7-46896599996966898999999999995699898---------------
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEE
Q ss_conf 67699999980778679999988642026776665432338679998445687675310358999999999642013589
Q gi|254780606|r 488 MEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAGKEIEGAIQRLAQMARAAGIHL 567 (744)
Q Consensus 488 m~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~~~~e~~~~~la~~~ra~Gihl 567 (744)
T Consensus 117 ---------~~G~s~~~~~~~l~~~l~~-----------~~~~~ivvLDEiD~L~~~~~~~vLY~L~r~~~~~~~~~~~v 176 (394)
T PRK00411 117 ---------SSGLSFDELFDKIAEYLDE-----------RDRVLIVALDDINYLVEKEGNDVLYSLLRAHEEYPGARIGV 176 (394)
T ss_pred ---------CCCCCHHHHHHHHHHHHHC-----------CCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEE
T ss_conf ---------7787899999999998616-----------69758999965540203665089999985402268873899
Q ss_pred EEEECCCC-CCCCHHHHHHCC-CCEEEEECCCHHHCCHHCCCC-------CH-----HHH----C--CCCCE------EE
Q ss_conf 99851654-444146788505-630572036811100326763-------16-----885----6--89846------86
Q gi|254780606|r 568 IMATQRPS-VDVITGTIKANF-PIRISFQVTSKIDSRTILGEH-------GA-----EQL----L--GRGDM------LY 621 (744)
Q Consensus 568 ilatQrp~-~~vi~~~ik~n~-~~ri~~~v~~~~dsr~il~~~-------ga-----e~l----~--g~gd~------l~ 621 (744)
T Consensus 177 I~IsN~~~~~~~Ldprv~S~l~~~~i~F~PY~~~qL~~IL~~R~~~af~~gv~~~~~i~~~A~~~a~~~GDaR~Aldllr 256 (394)
T PRK00411 177 IGISSDLTFLYILDPRVKSVFGPEEIVFPPYTADEIFDILKDRVEEGFYPGVVSDEVLELIADLTGREHGDARVAIDLLR 256 (394)
T ss_pred EEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 99976871776640777502786289858999899999999999841455678978999999998550475899999999
Q ss_pred ECCCCCEEEEEE-CCCCHHHHHHHHHHHHHCCCCCCCCC-------CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 468984389993-43898899999999984088753111-------1245555444456677777776603899999999
Q gi|254780606|r 622 MSGGGRIQRVHG-PLVSDIEIEKVVQHLKKQGCPEYLNT-------VTTDTDTDKDGNNFDSEEKKERSNLYAKAVDLVI 693 (744)
Q Consensus 622 ~~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (744)
T Consensus 257 ~A~--e~Ae~~g~~~Vt~~hV~~A~~~~~~~~~~~~i~~L~~~~klvL~ai~~~~-~---~~~~~~~~g~vy~~Y~~lc~ 330 (394)
T PRK00411 257 RAG--EIAEREGSRKVTEEDVRKAYEKSEPVHLEEVLRTLPLHEKLLLLAIVRLL-E---KGAPYVTTGEVYEEYKELCE 330 (394)
T ss_pred HHH--HHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHH-C---CCCCCCCHHHHHHHHHHHHH
T ss_conf 999--99997189965899999999986000088998738998999999999985-1---78876638999999999999
Q ss_pred HCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf 7498623220000010078999999999987975702
Q gi|254780606|r 694 DNQRCSTSFIQRRLQIGYNRAALLVERMEQEGLVSEA 730 (744)
Q Consensus 694 ~~~~~s~s~~qr~~~~g~~ra~~~~~~~e~~g~~~~~ 730 (744)
T Consensus 331 ~~~~~---------~ls~~~~~~~l~~L~~~giI~~~ 358 (394)
T PRK00411 331 ELGYE---------PRSHTRFYEYLNKLDMLGLINTR 358 (394)
T ss_pred HCCCC---------CCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 73998---------88799999999999867985888