HHsearch alignment for GI: 254780606 and conserved domain: PRK05595
>PRK05595 replicative DNA helicase; Provisional.
Probab=96.66 E-value=0.033 Score=34.16 Aligned_cols=150 Identities=13% Similarity=0.113 Sum_probs=76.3
Q ss_pred CHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECC-------CCCCCC--EEEEEEECHHHHH
Q ss_conf 2011484699707875344799999999998568011079997234210001-------257752--0000444417876
Q gi|254780606|r 408 DLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSV-------YDGIPH--LLTPVVTNPKKAV 478 (744)
Q Consensus 408 dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~-------~~~~ph--~~~~v~~~~~~~~ 478 (744)
T Consensus 197 Gl~~GdLiiiaaRP~mGKTa~alnia~~~a~~~---g~~V~~fSlEMs~~ql~~R~ls~~s~i~~~~i~~g~l~~~--~~ 271 (444)
T PRK05595 197 GFQKGDMILIAARPSMGKTTFALNIAEYAALRE---GKSVVIFSLEMSKEQLAYKLLCSEANVDMLRLRTGNLEDK--DW 271 (444)
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC---CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH--HH
T ss_conf 998577799985798980799999999999866---9937999588999999999999646988442326897999--99
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCC------HHHHHH
Q ss_conf 89999998667699999980778679999988642026776665432338679998445687675310------358999
Q gi|254780606|r 479 MALKWAVREMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAG------KEIEGA 552 (744)
Q Consensus 479 ~~l~~~~~em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~------~~~e~~ 552 (744)
T Consensus 272 ~~~~~a~~~l~~~~l~i~d~~~~ti~~i~~~~r~~~~~~---------~~--~liiiDYlq-Li~~~~~~~~r~~ev~~i 339 (444)
T PRK05595 272 ENIARASGPLAAAKIYIDDTAGVSVMEMRSKCRRLKIEH---------GI--DLILIDYLQ-LMSGGKSSESRQQEVSEI 339 (444)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC---------CC--CEEEEEHHH-HCCCCCCCCCHHHHHHHH
T ss_conf 999999999854897054899964899999999999873---------99--989982376-357898888899999999
Q ss_pred HHHHHHHHHCCEEEEEEEECCC
Q ss_conf 9999996420135899985165
Q gi|254780606|r 553 IQRLAQMARAAGIHLIMATQRP 574 (744)
Q Consensus 553 ~~~la~~~ra~GihlilatQrp 574 (744)
T Consensus 340 sr~LK~lAkel~ipvi~lsQLn 361 (444)
T PRK05595 340 SRSIKALAKEMECPVIALSQLS 361 (444)
T ss_pred HHHHHHHHHHHCCCEEEECCCC
T ss_conf 9999999999699799970268