HHsearch alignment for GI: 254780606 and conserved domain: PRK06321
>PRK06321 replicative DNA helicase; Provisional.
Probab=96.50 E-value=0.038 Score=33.70 Aligned_cols=147 Identities=16% Similarity=0.187 Sum_probs=76.5
Q ss_pred HCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCE--E-----CCCCCCCC--EEEEEEECHHHHHHHH
Q ss_conf 1484699707875344799999999998568011079997234210--0-----01257752--0000444417876899
Q gi|254780606|r 411 NMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLE--L-----SVYDGIPH--LLTPVVTNPKKAVMAL 481 (744)
Q Consensus 411 ~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~--~-----~~~~~~ph--~~~~v~~~~~~~~~~l 481 (744)
T Consensus 225 ~GdliviaaRPsmGKTalalnia~~~a~~~~---~~v~~fSLEMs~~ql~~R~ls~~s~i~~~~i~~g~l~~~e--~~~~ 299 (472)
T PRK06321 225 PSNLMILAARPAMGKTALALNIAENFCFQNR---LPVGIFSLEMTVDQLIHRIICSRSEVESKKISVGDLSGRD--FQRI 299 (472)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHCC---CCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH--HHHH
T ss_conf 6757998538999779999999999998569---9469975779999999999874037675521047999999--9999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCC---------HHHHHH
Q ss_conf 99998667699999980778679999988642026776665432338679998445687675310---------358999
Q gi|254780606|r 482 KWAVREMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAG---------KEIEGA 552 (744)
Q Consensus 482 ~~~~~em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~---------~~~e~~ 552 (744)
T Consensus 300 ~~a~~~l~~~~l~idd~~~~ti~~i~~~~r~~k~~~-----------~l~~vvIDYlq-L~~~~~~~~~~~~r~~~i~~i 367 (472)
T PRK06321 300 VSVVNEMQEHTLLIDDQPGLKITDLRARARRMKESY-----------DIQFLIIDYLQ-LLSGSGTLRNSESRQTEISEI 367 (472)
T ss_pred HHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHC-----------CCCEEEEEEHH-HCCCCCCCCCCCCHHHHHHHH
T ss_conf 999999854875786799998999999999998738-----------99879997277-416777777788899999999
Q ss_pred HHHHHHHHHCCEEEEEEEECCC
Q ss_conf 9999996420135899985165
Q gi|254780606|r 553 IQRLAQMARAAGIHLIMATQRP 574 (744)
Q Consensus 553 ~~~la~~~ra~GihlilatQrp 574 (744)
T Consensus 368 sr~lK~lAkel~vpvi~LsQLn 389 (472)
T PRK06321 368 SRMLKNLARELNIPILCLSQLS 389 (472)
T ss_pred HHHHHHHHHHHCCCEEEECCCC
T ss_conf 9999999999799799972268