HHsearch alignment for GI: 254780606 and conserved domain: PRK06871
>PRK06871 DNA polymerase III subunit delta'; Validated.
Probab=93.71 E-value=0.55 Score=25.77 Aligned_cols=191 Identities=15% Similarity=0.181 Sum_probs=90.4
Q ss_pred HHCCC-EEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEEC-CCCCEECCCCCCCCEEEEEEECH-HHHHHHHHHHHH
Q ss_conf 11484-6997078753447999999999985680110799972-34210001257752000044441-787689999998
Q gi|254780606|r 410 ANMPH-ILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVD-PKMLELSVYDGIPHLLTPVVTNP-KKAVMALKWAVR 486 (744)
Q Consensus 410 ~~~PH-~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD-~k~~~~~~~~~~ph~~~~v~~~~-~~~~~~l~~~~~ 486 (744)
T Consensus 20 ~r~~HA~L~~G~~G~Gk~~la~~~a~~llC-~~~~~~~--~Cg~C~sC~l~~~g~HPD~~--~i~~~~~k~--------- 85 (324)
T PRK06871 20 GRGHHALLFKADSGLGTEQLIRALAQWLMC-QAPGDEQ--PCGQCHSCHLFQAGNHPDFH--ILEPIDGKD--------- 85 (324)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHC-CCCCCCC--CCCCCHHHHHHHCCCCCCEE--EEECCCCCC---------
T ss_conf 995437876899997899999999999828-9999999--88889899999738999879--984678887---------
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEE
Q ss_conf 66769999998077867999998864202677666543233867999844568767531035899999999964201358
Q gi|254780606|r 487 EMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAGKEIEGAIQRLAQMARAAGIH 566 (744)
Q Consensus 487 em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~~~~e~~~~~la~~~ra~Gih 566 (744)
T Consensus 86 -----------I~vd~IR~l~~~~~~~~~---~--------g~~KV~iI~~-ae~m~~~A---aNALLKtLE-EPp~~~~ 138 (324)
T PRK06871 86 -----------IGVDQVREINEKVSQFAQ---Q--------GGNKVVYIQG-AERLTEAA---ANALLKTLE-EPRPNTY 138 (324)
T ss_pred -----------CCHHHHHHHHHHHHHCCC---C--------CCCEEEEECC-HHHHHHHH---HHHHHHHHC-CCCCCEE
T ss_conf -----------889999999999864622---0--------5966999758-88857999---999999833-8987838
Q ss_pred EEEEECCCCCCCCHHHHHHCCCCEEEEECCCHHHCCHHCCCCCHHHHCCC-CCE--EEECCCCCEEEEEECCCCHHHHHH
Q ss_conf 99985165444414678850563057203681110032676316885689-846--864689843899934389889999
Q gi|254780606|r 567 LIMATQRPSVDVITGTIKANFPIRISFQVTSKIDSRTILGEHGAEQLLGR-GDM--LYMSGGGRIQRVHGPLVSDIEIEK 643 (744)
Q Consensus 567 lilatQrp~~~vi~~~ik~n~~~ri~~~v~~~~dsr~il~~~gae~l~g~-gd~--l~~~~~~~~~r~~~~~~~~~~~~~ 643 (744)
T Consensus 139 fiL~t~~~~-~ll~-TI~SRCq-~~~~~~p~~~~~~~wL~~~~----~~~~~~~~~al~~~~g~pl~A~-~~~~~~~~~~ 210 (324)
T PRK06871 139 FLLQADLSA-SLLA-TIYSRCQ-TWLIHVPEEQIALDWLQAQS----SGEIQEIQTALRINYGRPLLAL-TFLEQGLLEQ 210 (324)
T ss_pred EEEEECCCC-CCCC-HHHHCCC-CEECCCCCHHHHHHHHHHHC----CCCHHHHHHHHHHCCCCHHHHH-HHHCCCHHHH
T ss_conf 999878701-0324-0862661-20089949999999999746----8872999999997699879999-9868779999
Q ss_pred HHHHHH
Q ss_conf 999998
Q gi|254780606|r 644 VVQHLK 649 (744)
Q Consensus 644 ~~~~~~ 649 (744)
T Consensus 211 r~~~~~ 216 (324)
T PRK06871 211 RKTFLR 216 (324)
T ss_pred HHHHHH
T ss_conf 999999