HHsearch alignment for GI: 254780606 and conserved domain: PRK07399
>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=94.26 E-value=0.17 Score=29.21 Aligned_cols=183 Identities=19% Similarity=0.280 Sum_probs=84.4
Q ss_pred ECCCCCEEECCH-------HHCCC-EEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECCCCCCC--CEE
Q ss_conf 057887321120-------11484-69970787534479999999999856801107999723421000125775--200
Q gi|254780606|r 398 KTISGESVIADL-------ANMPH-ILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSVYDGIP--HLL 467 (744)
Q Consensus 398 ~~~~g~~~~~dl-------~~~PH-~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~~~~~p--h~~ 467 (744)
T Consensus 4 ~~iiGq~~~~~~L~~ai~~~rl~hAyLF~Gp~G~GK~~~A~~fa~~Ll~~~~~~~~~----~~ri~~~----nHPDl~~i 75 (314)
T PRK07399 4 ANLIGQPLAIELLTAAIEQNRIAPAYLFAGPEGVGRKLAALRFIEGLLSQGSPSKNI----RRRLEEG----NHPDLLWV 75 (314)
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCH----HHHHHCC----CCCCEEEE
T ss_conf 312594999999999998599674487789998329999999999985789999766----5587518----99977886
Q ss_pred EEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCH
Q ss_conf 00444417876899999986676999999807786799999886420267766654323386799984456876753103
Q gi|254780606|r 468 TPVVTNPKKAVMALKWAVREMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAGK 547 (744)
Q Consensus 468 ~~v~~~~~~~~~~l~~~~~em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~~ 547 (744)
T Consensus 76 ~P~~~~~g~~~~~~~~~~~~~~~~~--~~~I~idqIR~l~~~l~~~p----------~~-~~~kVvII~~ae-~m~~~-- 139 (314)
T PRK07399 76 EPTYQHQGKLITASEAEEAGLKRKS--PPQIRLEQIREIKRFLSRPP----------LE-APRKVVVIEDAE-TMNEA-- 139 (314)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHCCCC----------CC-CCCEEEEECCHH-HCCHH--
T ss_conf 0562003454557789876530268--77787999999999973188----------56-884799988978-71999--
Q ss_pred HHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCHHHCCHHCCCCCH
Q ss_conf 589999999996420135899985165444414678850563057203681110032676316
Q gi|254780606|r 548 EIEGAIQRLAQMARAAGIHLIMATQRPSVDVITGTIKANFPIRISFQVTSKIDSRTILGEHGA 610 (744)
Q Consensus 548 ~~e~~~~~la~~~ra~GihlilatQrp~~~vi~~~ik~n~~~ri~~~v~~~~dsr~il~~~ga 610 (744)
T Consensus 140 -AaNaLLKtLEE-P~~~~-fILit~~~~-~lLpT-I~SRC-Q~i~F~~l~~~~i~~~L~~~~~ 196 (314)
T PRK07399 140 -AANALLKTLEE-PGNGT-LILIAPSPE-SLLPT-IVSRC-QIIPFYRLSDEQLEQVLKRLGD 196 (314)
T ss_pred -HHHHHHHHHCC-CCCCE-EEEEECCHH-HCCHH-HHCCC-EEEECCCCCHHHHHHHHHHCCC
T ss_conf -99999986147-87856-999979936-49146-64187-5633899899999999997166