HHsearch alignment for GI: 254780606 and conserved domain: PRK08006
>PRK08006 replicative DNA helicase; Provisional.
Probab=95.57 E-value=0.14 Score=29.73 Aligned_cols=150 Identities=16% Similarity=0.190 Sum_probs=71.5
Q ss_pred HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCE--E-----CCCCCCCC--EEEEEEECHHHHHH
Q ss_conf 011484699707875344799999999998568011079997234210--0-----01257752--00004444178768
Q gi|254780606|r 409 LANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLE--L-----SVYDGIPH--LLTPVVTNPKKAVM 479 (744)
Q Consensus 409 l~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~--~-----~~~~~~ph--~~~~v~~~~~~~~~ 479 (744)
T Consensus 221 l~~G~LiviaaRPsmGKTalalnia~~~a~~~---~~~V~~fSlEMs~~ql~~Rlla~~s~v~~~~i~~g~l~~~e~~-~ 296 (471)
T PRK08006 221 LQPSDLIIVAARPSMGKTTFAMNLCENAAMLQ---DKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWA-R 296 (471)
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHC---CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH-H
T ss_conf 82173899994699876999999999999866---9957998167999999999999744777554536887999999-9
Q ss_pred HHHHHHH-HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCC------HHHHHH
Q ss_conf 9999998-667699999980778679999988642026776665432338679998445687675310------358999
Q gi|254780606|r 480 ALKWAVR-EMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAG------KEIEGA 552 (744)
Q Consensus 480 ~l~~~~~-em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~------~~~e~~ 552 (744)
T Consensus 297 -l~~~~~~~~~~~~l~idd~~~~t~~~i~a~~r~~~~~~-----~---gl--~lvvIDYLq-L~~~~~~~~~r~~ei~~i 364 (471)
T PRK08006 297 -ISGTMGILLEKRNMYIDDSSGLTPTEVRSRARRIFREH-----G---GL--SLIMIDYLQ-LMRVPSLSDNRTLEIAEI 364 (471)
T ss_pred -HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHC-----C---CC--CEEEEEHHH-HCCCCCCCCCHHHHHHHH
T ss_conf -99999999751885773689998999999999999864-----8---98--689963886-616787441066899999
Q ss_pred HHHHHHHHHCCEEEEEEEECCC
Q ss_conf 9999996420135899985165
Q gi|254780606|r 553 IQRLAQMARAAGIHLIMATQRP 574 (744)
Q Consensus 553 ~~~la~~~ra~GihlilatQrp 574 (744)
T Consensus 365 sr~lK~lAkel~ipVi~LsQLn 386 (471)
T PRK08006 365 SRSLKALAKELQVPVVALSQLN 386 (471)
T ss_pred HHHHHHHHHHHCCCEEEECCCC
T ss_conf 9999999999699689970168