HHsearch alignment for GI: 254780606 and conserved domain: PRK08006

>PRK08006 replicative DNA helicase; Provisional.
Probab=95.57  E-value=0.14  Score=29.73  Aligned_cols=150  Identities=16%  Similarity=0.190  Sum_probs=71.5

Q ss_pred             HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCE--E-----CCCCCCCC--EEEEEEECHHHHHH
Q ss_conf             011484699707875344799999999998568011079997234210--0-----01257752--00004444178768
Q gi|254780606|r  409 LANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLE--L-----SVYDGIPH--LLTPVVTNPKKAVM  479 (744)
Q Consensus       409 l~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~--~-----~~~~~~ph--~~~~v~~~~~~~~~  479 (744)
T Consensus       221 l~~G~LiviaaRPsmGKTalalnia~~~a~~~---~~~V~~fSlEMs~~ql~~Rlla~~s~v~~~~i~~g~l~~~e~~-~  296 (471)
T PRK08006        221 LQPSDLIIVAARPSMGKTTFAMNLCENAAMLQ---DKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWA-R  296 (471)
T ss_pred             CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHC---CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH-H
T ss_conf             82173899994699876999999999999866---9957998167999999999999744777554536887999999-9


Q ss_pred             HHHHHHH-HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCC------HHHHHH
Q ss_conf             9999998-667699999980778679999988642026776665432338679998445687675310------358999
Q gi|254780606|r  480 ALKWAVR-EMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAG------KEIEGA  552 (744)
Q Consensus       480 ~l~~~~~-em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~------~~~e~~  552 (744)
T Consensus       297 -l~~~~~~~~~~~~l~idd~~~~t~~~i~a~~r~~~~~~-----~---gl--~lvvIDYLq-L~~~~~~~~~r~~ei~~i  364 (471)
T PRK08006        297 -ISGTMGILLEKRNMYIDDSSGLTPTEVRSRARRIFREH-----G---GL--SLIMIDYLQ-LMRVPSLSDNRTLEIAEI  364 (471)
T ss_pred             -HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHC-----C---CC--CEEEEEHHH-HCCCCCCCCCHHHHHHHH
T ss_conf             -99999999751885773689998999999999999864-----8---98--689963886-616787441066899999


Q ss_pred             HHHHHHHHHCCEEEEEEEECCC
Q ss_conf             9999996420135899985165
Q gi|254780606|r  553 IQRLAQMARAAGIHLIMATQRP  574 (744)
Q Consensus       553 ~~~la~~~ra~GihlilatQrp  574 (744)
T Consensus       365 sr~lK~lAkel~ipVi~LsQLn  386 (471)
T PRK08006        365 SRSLKALAKELQVPVVALSQLN  386 (471)
T ss_pred             HHHHHHHHHHHCCCEEEECCCC
T ss_conf             9999999999699689970168