HHsearch alignment for GI: 254780606 and conserved domain: PRK08058
>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=94.45 E-value=0.29 Score=27.62 Aligned_cols=152 Identities=14% Similarity=0.167 Sum_probs=70.1
Q ss_pred HHCCCE-EEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEE--CCCCCCCCEEEEEEECHHHHHHHHHHHHH
Q ss_conf 114846-997078753447999999999985680110799972342100--01257752000044441787689999998
Q gi|254780606|r 410 ANMPHI-LVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLEL--SVYDGIPHLLTPVVTNPKKAVMALKWAVR 486 (744)
Q Consensus 410 ~~~PH~-lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~--~~~~~~ph~~~~v~~~~~~~~~~l~~~~~ 486 (744)
T Consensus 25 ~rl~HA~Lf~Gp~G~GK~~~A~~~A~~LlC~~-~~~~-----~~Cg~C~~C~~~~~~~HPD~~~i-~p~~~~--i--~id 93 (329)
T PRK08058 25 NRLAHAYLFEGAKGTGKKATALWLAKSLFCLE-RNGV-----EPCGTCTNCKRIESGNHPDVHLV-APDGQS--I--KKD 93 (329)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC-CCCC-----CCCCCCHHHHHHHCCCCCCEEEE-CCCCCC--C--CHH
T ss_conf 99661565578999889999999999973999-9999-----98878889999876999976774-566140--7--799
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEE
Q ss_conf 66769999998077867999998864202677666543233867999844568767531035899999999964201358
Q gi|254780606|r 487 EMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAGKEIEGAIQRLAQMARAAGIH 566 (744)
Q Consensus 487 em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~~~~e~~~~~la~~~ra~Gih 566 (744)
T Consensus 94 qiR---~L~------------~~~~~---~p~~--------g~~KV~II~~Ae~m~~~A----aNALLKtLE-EPp~~t~ 142 (329)
T PRK08058 94 QIR---YLK------------EEFSK---SGVE--------SNKKVYIIEHADKMTASA----ANSLLKFLE-EPSGDTT 142 (329)
T ss_pred HHH---HHH------------HHHCC---CCCC--------CCCEEEEEECHHHHCHHH----HHHHHHHHH-CCCCCCE
T ss_conf 999---999------------99643---8757--------886799973477629999----999999864-6897867
Q ss_pred EEEEECCCCCCCCHHHHHHCCCCEEEEECCCHHHCCHHCC
Q ss_conf 9998516544441467885056305720368111003267
Q gi|254780606|r 567 LIMATQRPSVDVITGTIKANFPIRISFQVTSKIDSRTILG 606 (744)
Q Consensus 567 lilatQrp~~~vi~~~ik~n~~~ri~~~v~~~~dsr~il~ 606 (744)
T Consensus 143 fIL~t~~~~-~lLpT-I~SRC-q~i~f~~~~~~~i~~~L~ 179 (329)
T PRK08058 143 AILLTENKH-QILPT-ILSRC-QVVEFRPLPPESLIQRLQ 179 (329)
T ss_pred EEEEECCHH-HHHHH-HHHCC-EEEECCCCCHHHHHHHHH
T ss_conf 998729966-64368-86314-256588999999999999