HHsearch alignment for GI: 254780606 and conserved domain: PRK08181
>PRK08181 transposase; Validated.
Probab=94.27 E-value=0.43 Score=26.48 Aligned_cols=44 Identities=14% Similarity=0.308 Sum_probs=26.7
Q ss_pred EEEEEHHHHHHHHHHCCHHHHHHHHHHHHH-HHCCEEEEEEEECCCCCC
Q ss_conf 799984456876753103589999999996-420135899985165444
Q gi|254780606|r 530 YIVIIVDEMADLMMVAGKEIEGAIQRLAQM-ARAAGIHLIMATQRPSVD 577 (744)
Q Consensus 530 ~ivvviDE~a~l~~~~~~~~e~~~~~la~~-~ra~GihlilatQrp~~~ 577 (744)
T Consensus 168 ~dLLIiDe~G~~~~-~~~~~~~lf~lI~~Rye~~---S~IITSn~~~~~ 212 (269)
T PRK08181 168 FDLLILDDLAYVTK-DQAETSVLFELISARYERR---SILITANQPFGE 212 (269)
T ss_pred CCEEEEHHCCCCCC-CHHHHHHHHHHHHHHHCCC---CEEEECCCCHHH
T ss_conf 46012201056679-9899999999999985788---889988999778