HHsearch alignment for GI: 254780606 and conserved domain: PRK08506
>PRK08506 replicative DNA helicase; Provisional.
Probab=95.91 E-value=0.074 Score=31.74 Aligned_cols=148 Identities=19% Similarity=0.234 Sum_probs=77.3
Q ss_pred HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEE-------CCCCCCC--CEEEEEEECHHHHHH
Q ss_conf 0114846997078753447999999999985680110799972342100-------0125775--200004444178768
Q gi|254780606|r 409 LANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLEL-------SVYDGIP--HLLTPVVTNPKKAVM 479 (744)
Q Consensus 409 l~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~-------~~~~~~p--h~~~~v~~~~~~~~~ 479 (744)
T Consensus 190 l~~gdLiIIAARPsmGKTAfAlniA~~~a~~~~----~V~~FSLEMs~~ql~~Rlls~~s~V~~~~lr~g~l~~~e--~~ 263 (473)
T PRK08506 190 FNKGDLIIIAARPSMGKTTLVLNMVLKALNQGK----GVAFFSLEMPAEQLMLRMLSAKTSIPLQNLRTGDLDDDE--WE 263 (473)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC----CEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH--HH
T ss_conf 985627999507998678999999999996599----658982247999999999997288783100068999999--99
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCC------HHHHHHH
Q ss_conf 9999998667699999980778679999988642026776665432338679998445687675310------3589999
Q gi|254780606|r 480 ALKWAVREMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAG------KEIEGAI 553 (744)
Q Consensus 480 ~l~~~~~em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~------~~~e~~~ 553 (744)
T Consensus 264 ~~~~a~~~l~~~~l~IdD~~~lti~~Ira~~Rr~k~~~~--------~l~--livIDYLQ-Lm~~~~~~~~R~~ev~~IS 332 (473)
T PRK08506 264 NLSDACDELSQKKLFVYDSGYVNIHQVRAQLRKLKSQHP--------EIG--LAVIDYLQ-LMSGSKNFKDRHLQISEIS 332 (473)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCC--------CCC--EEEEEHHH-HCCCCCCCCCHHHHHHHHH
T ss_conf 999999998659889988999999999999999999769--------987--89963675-5468887530889999999
Q ss_pred HHHHHHHHCCEEEEEEEECC
Q ss_conf 99999642013589998516
Q gi|254780606|r 554 QRLAQMARAAGIHLIMATQR 573 (744)
Q Consensus 554 ~~la~~~ra~GihlilatQr 573 (744)
T Consensus 333 r~LK~lAkEl~vPViaLSQL 352 (473)
T PRK08506 333 RGLKLLARELDIPIIALSQL 352 (473)
T ss_pred HHHHHHHHHHCCCEEEECCC
T ss_conf 99999999969979997036