HHsearch alignment for GI: 254780606 and conserved domain: PRK08760
>PRK08760 replicative DNA helicase; Provisional.
Probab=96.46 E-value=0.028 Score=34.63 Aligned_cols=148 Identities=17% Similarity=0.190 Sum_probs=73.0
Q ss_pred HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECC-------CCCCCC--EEEEEEECHHHHHH
Q ss_conf 011484699707875344799999999998568011079997234210001-------257752--00004444178768
Q gi|254780606|r 409 LANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSV-------YDGIPH--LLTPVVTNPKKAVM 479 (744)
Q Consensus 409 l~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~-------~~~~ph--~~~~v~~~~~~~~~ 479 (744)
T Consensus 226 l~~G~LiViaaRPsmGKTalalnia~~~A~~~~~---~V~~fSLEMs~~ql~~Rlls~~s~v~~~~i~~g~l~~~e~--~ 300 (476)
T PRK08760 226 LQPTDLIILAARPAMGKTTFALNIAEYAAIKSKK---GVAVFSMEMSASQLAMRLISSNGRINAQRLRTGALEDEDW--A 300 (476)
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC---CEEEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHH--H
T ss_conf 9877779998778874789999999999983799---7899703699999999999983389767776489999999--9
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCC------HHHHHHH
Q ss_conf 9999998667699999980778679999988642026776665432338679998445687675310------3589999
Q gi|254780606|r 480 ALKWAVREMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAG------KEIEGAI 553 (744)
Q Consensus 480 ~l~~~~~em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~------~~~e~~~ 553 (744)
T Consensus 301 ~~~~a~~~l~~~~l~idD~~~~t~~~ir~~~R~~k~~~------~---l--~lvvIDYLq-L~~~~~~~~~r~~~v~~is 368 (476)
T PRK08760 301 RVTGAIKMLKETKIFIDDTPGVSPEVLRSKCRRLKREH------D---L--GLIVIDYLQ-LMSVPGNSENRATEISEIS 368 (476)
T ss_pred HHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHC------C---C--CEEEEEHHH-HCCCCCCCCCHHHHHHHHH
T ss_conf 99999999860881685799999999999999998727------9---9--879997076-4158888744889999999
Q ss_pred HHHHHHHHCCEEEEEEEECC
Q ss_conf 99999642013589998516
Q gi|254780606|r 554 QRLAQMARAAGIHLIMATQR 573 (744)
Q Consensus 554 ~~la~~~ra~GihlilatQr 573 (744)
T Consensus 369 r~lK~lAkel~vpVi~LsQL 388 (476)
T PRK08760 369 RSLKGLAKELNVPVIALSQL 388 (476)
T ss_pred HHHHHHHHHHCCCEEEECCC
T ss_conf 99999999979978996315