HHsearch alignment for GI: 254780606 and conserved domain: PRK08840

>PRK08840 replicative DNA helicase; Provisional.
Probab=96.06  E-value=0.039  Score=33.61  Aligned_cols=147  Identities=16%  Similarity=0.170  Sum_probs=71.7

Q ss_pred             HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECC-------CCCCC--CEEEEEEECHHH--H
Q ss_conf             011484699707875344799999999998568011079997234210001-------25775--200004444178--7
Q gi|254780606|r  409 LANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSV-------YDGIP--HLLTPVVTNPKK--A  477 (744)
Q Consensus       409 l~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~-------~~~~p--h~~~~v~~~~~~--~  477 (744)
T Consensus       214 l~~G~LiviaaRPsmGKTalalnia~n~a~~~~---~~v~~fSlEMs~~ql~~Rlls~~s~i~~~~ir~g~l~~~e~~~i  290 (464)
T PRK08840        214 LQGSDLIIVAARPSMGKTTFAMNLCENAAMDQD---KPVLIFSLEMPAEQLMMRMLASLSRVDQTKIRTGQLDDEDWARI  290 (464)
T ss_pred             CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC---CCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHH
T ss_conf             875767999837987368999999999999659---96799767799899999999985389820111488899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCC------HHHHH
Q ss_conf             689999998667699999980778679999988642026776665432338679998445687675310------35899
Q gi|254780606|r  478 VMALKWAVREMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAG------KEIEG  551 (744)
Q Consensus       478 ~~~l~~~~~em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~------~~~e~  551 (744)
T Consensus       291 ~~a~~~~---~~~~~l~idd~~~~t~~~i~a~~r~~~~~~--------~~l--~lvvIDYLq-L~~~~~~~~~r~~~i~~  356 (464)
T PRK08840        291 SSTMGIL---MEKKNMYIDDSSGLTPTEVRSRARRVAREH--------GGL--SMIMVDYLQ-LMRVPALQDNRTLEIAE  356 (464)
T ss_pred             HHHHHHH---HHCCCEEEECCCCCCHHHHHHHHHHHHHHC--------CCC--CEEEEEHHH-HCCCCCCCCHHHHHHHH
T ss_conf             9999999---847995885699875799999999999864--------898--789961886-60678864036789999


Q ss_pred             HHHHHHHHHHCCEEEEEEEEC
Q ss_conf             999999964201358999851
Q gi|254780606|r  552 AIQRLAQMARAAGIHLIMATQ  572 (744)
Q Consensus       552 ~~~~la~~~ra~GihlilatQ  572 (744)
T Consensus       357 isr~lK~lAkel~vpVv~lsQ  377 (464)
T PRK08840        357 ISRSLKALAKELNVPVVALSQ  377 (464)
T ss_pred             HHHHHHHHHHHHCCCEEEECC
T ss_conf             999999999996998999631