HHsearch alignment for GI: 254780606 and conserved domain: PRK09183
>PRK09183 transposase/IS protein; Provisional.
Probab=93.20 E-value=0.66 Score=25.23 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=20.9
Q ss_pred HCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 1484699707875344799999999998
Q gi|254780606|r 411 NMPHILVAGTTGSGKSVAINTMIMSLLY 438 (744)
Q Consensus 411 ~~PH~lvaG~TgsGKS~~l~~~i~sl~~ 438 (744)
T Consensus 100 ~~~Nvil~G~~GtGKThLA~Alg~~A~~ 127 (258)
T PRK09183 100 RNENIVLLGPSGVGKTHLAIALGYEAVR 127 (258)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 5886799899998689999999999998