HHsearch alignment for GI: 254780606 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=93.20  E-value=0.66  Score=25.23  Aligned_cols=28  Identities=18%  Similarity=0.254  Sum_probs=20.9

Q ss_pred             HCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             1484699707875344799999999998
Q gi|254780606|r  411 NMPHILVAGTTGSGKSVAINTMIMSLLY  438 (744)
Q Consensus       411 ~~PH~lvaG~TgsGKS~~l~~~i~sl~~  438 (744)
T Consensus       100 ~~~Nvil~G~~GtGKThLA~Alg~~A~~  127 (258)
T PRK09183        100 RNENIVLLGPSGVGKTHLAIALGYEAVR  127 (258)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf             5886799899998689999999999998