HHsearch alignment for GI: 254780606 and conserved domain: PRK10070
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional.
Probab=95.02 E-value=0.15 Score=29.63 Aligned_cols=153 Identities=16% Similarity=0.316 Sum_probs=75.9
Q ss_pred CEEECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCC------------------CEECCCCCCC
Q ss_conf 7321120114846997078753447999999999985680110799972342------------------1000125775
Q gi|254780606|r 403 ESVIADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKM------------------LELSVYDGIP 464 (744)
Q Consensus 403 ~~~~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~------------------~~~~~~~~~p 464 (744)
T Consensus 45 ~dVsl~I~~GEi~~ivG~SGsGKSTLlr~-i~gL~---~Pt~G~I~i-~G~di~~~~~~~l~~~rrr~igmVFQ~~aL~P 119 (400)
T PRK10070 45 KDASLAIEEGEIFVIMGLSGSGKSTMVRL-LNRLI---EPTRGQVLI-DGVDIAKISDAELREVRRKKIAMVFQSFALMP 119 (400)
T ss_pred ECCEEEECCCCEEEEECCCCCHHHHHHHH-HHCCC---CCCCCEEEE-CCEECCCCCHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 74076887999999999998469999999-97599---989818999-99999989978987651465599957974143
Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCHHH-H--------HHHHHHHHCCCCCCCCCCCCCCCEEEEE
Q ss_conf 200004444178768999999866769-99999807786799-9--------9988642026776665432338679998
Q gi|254780606|r 465 HLLTPVVTNPKKAVMALKWAVREMEER-YRKMSHLSVRNIKS-Y--------NERISTMYGEKPQGCGDDMRPMPYIVII 534 (744)
Q Consensus 465 h~~~~v~~~~~~~~~~l~~~~~em~~r-~~~~~~~~~~~i~~-~--------n~~~~~~~~~~~~~~~~~~~~~p~ivvv 534 (744)
T Consensus 120 ~~T--V~eNi~~~l~~~~~~~~e~~~ra~e~L~~VgL~~~~~~yP~eLSGGqqQRVaiARA---------La~~P~iL-L 187 (400)
T PRK10070 120 HMT--VLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARA---------LAINPDIL-L 187 (400)
T ss_pred CCC--HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHCCHHHHHHHHHHHH---------HHCCCCEE-E
T ss_conf 888--88878789998499989999999999997499024218934489999999999999---------86299999-9
Q ss_pred HHH-HHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCC
Q ss_conf 445-68767531035899999999964201358999851654
Q gi|254780606|r 535 VDE-MADLMMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPS 575 (744)
Q Consensus 535 iDE-~a~l~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~ 575 (744)
T Consensus 188 ~DEP~SALDp~~r~~i~~---~l~~L~~~~~~TiifVTHDl~ 226 (400)
T PRK10070 188 MDEAFSALDPLIRTEMQD---ELVKLQAKHQRTIVFISHDLD 226 (400)
T ss_pred EECCCCCCCHHHHHHHHH---HHHHHHHHHCCEEEEECCCHH
T ss_conf 708765459899999999---999999985999999899999