HHsearch alignment for GI: 254780606 and conserved domain: PRK11131

>PRK11131 ATP-dependent RNA helicase HrpA; Provisional.
Probab=97.59  E-value=0.00088  Score=44.93  Aligned_cols=25  Identities=32%  Similarity=0.599  Sum_probs=14.6

Q ss_pred             HHCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf             1148469970787534479999999
Q gi|254780606|r  410 ANMPHILVAGTTGSGKSVAINTMIM  434 (744)
Q Consensus       410 ~~~PH~lvaG~TgsGKS~~l~~~i~  434 (744)
T Consensus        87 ~~nqVvii~GeTGsGKTTQiPq~~l  111 (1295)
T PRK11131         87 RDHQVVIVAGETGSGKTTQLPKICL  111 (1295)
T ss_pred             HHCCEEEEECCCCCCHHHHHHHHHH
T ss_conf             9799699976899987889999999