HHsearch alignment for GI: 254780606 and conserved domain: PRK11247
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional.
Probab=94.69 E-value=0.32 Score=27.41 Aligned_cols=147 Identities=15% Similarity=0.213 Sum_probs=66.4
Q ss_pred CCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCC-CE----E-CCCCCCCCEEEEEEECHHHHHHH
Q ss_conf 120114846997078753447999999999985680110799972342-10----0-01257752000044441787689
Q gi|254780606|r 407 ADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKM-LE----L-SVYDGIPHLLTPVVTNPKKAVMA 480 (744)
Q Consensus 407 ~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~-~~----~-~~~~~~ph~~~~v~~~~~~~~~~ 480 (744)
T Consensus 33 ~~I~~GEiv~LiG~nGaGKSTLlr~-i~Gl~---~p~~G~I~-~~~~~i~~~~~~i~~vfQ~-~~l~-~~~tV~eni~~g 105 (257)
T PRK11247 33 LHIPAGQFVAVVGRSGCGKSTLLRL-LAGLE---TPTAGDLL-AGTAPLAEAQEDTRLMFQD-ARLL-PWKKVIDNVGLG 105 (257)
T ss_pred EEECCCCEEEEECCCCCHHHHHHHH-HHCCC---CCCCCEEE-ECCEEHHHHHHCEEEEECC-CCCC-CCCCHHHHHHHH
T ss_conf 5887998999998998889999999-96589---88887089-8987554431100799325-6447-677899998632
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHH---------HHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHH-HHHHCCHHHH
Q ss_conf 9999986676999999807786799---------99988642026776665432338679998445687-6753103589
Q gi|254780606|r 481 LKWAVREMEERYRKMSHLSVRNIKS---------YNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMAD-LMMVAGKEIE 550 (744)
Q Consensus 481 l~~~~~em~~r~~~~~~~~~~~i~~---------~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~-l~~~~~~~~e 550 (744)
T Consensus 106 l~~~--~~~~~~e~l~~vgL~~~~~~~p~~LSGGqkQRvaiAraL---------~~~P~-lLlLDEPtsgLD~---~~~~ 170 (257)
T PRK11247 106 LKGQ--WRDAALQALAAVGLADRANEWPAALSGGQKQRVALARAL---------IHRPR-LLLLDEPLGALDA---LTRI 170 (257)
T ss_pred CCCC--HHHHHHHHHHHCCCCHHHHCCHHHCCHHHHHHHHHHHHH---------HCCCC-EEEEECCCCCCCH---HHHH
T ss_conf 1410--699999999985991355369444899999999999998---------45999-9998098765799---9999
Q ss_pred HHHHHHHHHHHCCEEEEEEEECCCC
Q ss_conf 9999999964201358999851654
Q gi|254780606|r 551 GAIQRLAQMARAAGIHLIMATQRPS 575 (744)
Q Consensus 551 ~~~~~la~~~ra~GihlilatQrp~ 575 (744)
T Consensus 171 ~i~~ll~~L~~e~g~TIi~vTHdl~ 195 (257)
T PRK11247 171 EMQDLIESLWQQHGFTVLLVTHDVS 195 (257)
T ss_pred HHHHHHHHHHHHHCCEEEEECCCHH
T ss_conf 9999999999960989999887999