HHsearch alignment for GI: 254780606 and conserved domain: PRK11247

>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional.
Probab=94.69  E-value=0.32  Score=27.41  Aligned_cols=147  Identities=15%  Similarity=0.213  Sum_probs=66.4

Q ss_pred             CCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCC-CE----E-CCCCCCCCEEEEEEECHHHHHHH
Q ss_conf             120114846997078753447999999999985680110799972342-10----0-01257752000044441787689
Q gi|254780606|r  407 ADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKM-LE----L-SVYDGIPHLLTPVVTNPKKAVMA  480 (744)
Q Consensus       407 ~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~-~~----~-~~~~~~ph~~~~v~~~~~~~~~~  480 (744)
T Consensus        33 ~~I~~GEiv~LiG~nGaGKSTLlr~-i~Gl~---~p~~G~I~-~~~~~i~~~~~~i~~vfQ~-~~l~-~~~tV~eni~~g  105 (257)
T PRK11247         33 LHIPAGQFVAVVGRSGCGKSTLLRL-LAGLE---TPTAGDLL-AGTAPLAEAQEDTRLMFQD-ARLL-PWKKVIDNVGLG  105 (257)
T ss_pred             EEECCCCEEEEECCCCCHHHHHHHH-HHCCC---CCCCCEEE-ECCEEHHHHHHCEEEEECC-CCCC-CCCCHHHHHHHH
T ss_conf             5887998999998998889999999-96589---88887089-8987554431100799325-6447-677899998632


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCHHH---------HHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHH-HHHHCCHHHH
Q ss_conf             9999986676999999807786799---------99988642026776665432338679998445687-6753103589
Q gi|254780606|r  481 LKWAVREMEERYRKMSHLSVRNIKS---------YNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMAD-LMMVAGKEIE  550 (744)
Q Consensus       481 l~~~~~em~~r~~~~~~~~~~~i~~---------~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~-l~~~~~~~~e  550 (744)
T Consensus       106 l~~~--~~~~~~e~l~~vgL~~~~~~~p~~LSGGqkQRvaiAraL---------~~~P~-lLlLDEPtsgLD~---~~~~  170 (257)
T PRK11247        106 LKGQ--WRDAALQALAAVGLADRANEWPAALSGGQKQRVALARAL---------IHRPR-LLLLDEPLGALDA---LTRI  170 (257)
T ss_pred             CCCC--HHHHHHHHHHHCCCCHHHHCCHHHCCHHHHHHHHHHHHH---------HCCCC-EEEEECCCCCCCH---HHHH
T ss_conf             1410--699999999985991355369444899999999999998---------45999-9998098765799---9999


Q ss_pred             HHHHHHHHHHHCCEEEEEEEECCCC
Q ss_conf             9999999964201358999851654
Q gi|254780606|r  551 GAIQRLAQMARAAGIHLIMATQRPS  575 (744)
Q Consensus       551 ~~~~~la~~~ra~GihlilatQrp~  575 (744)
T Consensus       171 ~i~~ll~~L~~e~g~TIi~vTHdl~  195 (257)
T PRK11247        171 EMQDLIESLWQQHGFTVLLVTHDVS  195 (257)
T ss_pred             HHHHHHHHHHHHHCCEEEEECCCHH
T ss_conf             9999999999960989999887999