HHsearch alignment for GI: 254780606 and conserved domain: PRK11331
>PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional.
Probab=91.09 E-value=1.1 Score=23.56 Aligned_cols=51 Identities=20% Similarity=0.361 Sum_probs=38.9
Q ss_pred CEEECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCC
Q ss_conf 732112011484699707875344799999999998568011079997234
Q gi|254780606|r 403 ESVIADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPK 453 (744)
Q Consensus 403 ~~~~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k 453 (744)
T Consensus 185 ~~~~~sLktKknvIL~G~pGtGKT~lAk~lA~~l~g~~~~~rv~~Vqfhps 235 (459)
T PRK11331 185 ETILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQS 235 (459)
T ss_pred HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCC
T ss_conf 999998545882796589998878999999999707887784689983588