HHsearch alignment for GI: 254780606 and conserved domain: PRK12678

>PRK12678 transcription termination factor Rho; Provisional.
Probab=90.33  E-value=1.3  Score=23.11  Aligned_cols=53  Identities=11%  Similarity=0.164  Sum_probs=41.8

Q ss_pred             HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECCCC
Q ss_conf             01148469970787534479999999999856801107999723421000125
Q gi|254780606|r  409 LANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSVYD  461 (744)
Q Consensus       409 l~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~~~  461 (744)
T Consensus       408 iGkGQRgLIVapPkaGKT~ll~~ia~ai~~N~pe~~l~vlLiDERPEEVTdm~  460 (667)
T PRK12678        408 IGKGQRGLIVSPPKAGKTTILQDIANAITTNNPECHLMVVLVDERPEEVTDMQ  460 (667)
T ss_pred             CCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
T ss_conf             67884546757997872599999999998569972899997378851566766