HHsearch alignment for GI: 254780606 and conserved domain: PTZ00209

>PTZ00209 retrotransposon hot spot protein; Provisional.
Probab=93.35  E-value=0.26  Score=27.97  Aligned_cols=54  Identities=17%  Similarity=0.357  Sum_probs=38.4

Q ss_pred             HCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECCCCCCCC
Q ss_conf             1484699707875344799999999998568011079997234210001257752
Q gi|254780606|r  411 NMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSVYDGIPH  465 (744)
Q Consensus       411 ~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~~~~~ph  465 (744)
T Consensus       172 P~~~vLI-GTPGIGKSm~aGSyLLYqLLHyDae~L~vVay~~g~~aylf~~k~~~  225 (693)
T PTZ00209        172 PPTHIVI-GISGIGKSCGVGSFLLHSLLHFHEGMLDVVVYFTDVKAYLIYNKKGN  225 (693)
T ss_pred             CCCEEEE-CCCCCCCCCCCHHHHHHHHHHCCHHHCCEEEEEECCEEEEEEECCCC
T ss_conf             9852897-89975533342899999987135745858999966768999855898