HHsearch alignment for GI: 254780606 and conserved domain: TIGR01967
>TIGR01967 DEAH_box_HrpA ATP-dependent helicase HrpA; InterPro: IPR010222 This entry represents HrpA, one of two related but uncharacterised DEAH-box ATP-dependent helicases in many Proteobacteria and a few high-GC Gram-positive bacteria. HrpA is about 1300 amino acids long, while its paralog HrpB, also uncharacterised, is about 800 amino acids long. Related characterised eukaryotic proteins are RNA helicases associated with pre-mRNA processing.; GO: 0005524 ATP binding, 0008026 ATP-dependent helicase activity.
Probab=90.75 E-value=0.13 Score=30.13 Aligned_cols=22 Identities=32% Similarity=0.678 Sum_probs=16.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHH
Q ss_conf 4699707875344799999999
Q gi|254780606|r 414 HILVAGTTGSGKSVAINTMIMS 435 (744)
Q Consensus 414 H~lvaG~TgsGKS~~l~~~i~s 435 (744)
T Consensus 86 VviiAGETGSGKTTQLPKICLE 107 (1320)
T TIGR01967 86 VVIIAGETGSGKTTQLPKICLE 107 (1320)
T ss_pred EEEEECCCCCCCCCCCHHHHHH
T ss_conf 8999724487620232167775