HHsearch alignment for GI: 254780606 and conserved domain: TIGR02525
>TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ; InterPro: IPR013364 Proteins in this entry are predicted ATPases associated with plasmid transfer loci in bacteria. This family is most similar to the DotB ATPase (IPR013363 from INTERPRO) of a type-IV secretion-like system of the obligate intracellular pathogens Legionella pneumophila and Coxiella burnetii..
Probab=95.53 E-value=0.0068 Score=38.83 Aligned_cols=70 Identities=23% Similarity=0.310 Sum_probs=35.9
Q ss_pred HCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEE-ECCCCCEECCCCC-CC-CEEEEEEECHHHHHHHHH
Q ss_conf 148469970787534479999999999856801107999-7234210001257-75-200004444178768999
Q gi|254780606|r 411 NMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIM-VDPKMLELSVYDG-IP-HLLTPVVTNPKKAVMALK 482 (744)
Q Consensus 411 ~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~l-iD~k~~~~~~~~~-~p-h~~~~v~~~~~~~~~~l~ 482 (744)
T Consensus 148 ~~GLGLiCG~TGSGKSTl~AaiY~~-~l~t~pdR-KivT~EDPvEY~L~~~~~~l~ap~Q~~IGRDv~sFa~Glr 220 (374)
T TIGR02525 148 KAGLGLICGETGSGKSTLAAAIYRH-CLETYPDR-KIVTYEDPVEYILGSPDDLLPAPAQSEIGRDVESFAEGLR 220 (374)
T ss_pred CCCCEEECCCCCCCHHHHHHHHHHH-HCCCCCCC-EEEEEECCEEEECCCCCCHHCCCCCHHCCCCHHHHHHHHH
T ss_conf 0378022177897289999999998-50748897-0798657721231885201027630110687678862320