HHsearch alignment for GI: 254780606 and conserved domain: TIGR02533
>TIGR02533 type_II_gspE general secretory pathway protein E; InterPro: IPR013369 GspE, the E protein of the type II secretion system, is also referred to as the main terminal branch of the general secretion pathway. ; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015628 protein secretion by the type II secretion system, 0015627 type II protein secretion system complex.
Probab=95.85 E-value=0.0029 Score=41.34 Aligned_cols=228 Identities=25% Similarity=0.398 Sum_probs=119.3
Q ss_pred EE-EEECCCCEEEE---ECCCCCCCEEEHHHHHCCHHHCCCCCCEEEEEEECCCCCEEECCHHHCCCE--EEEECCCCCH
Q ss_conf 27-75189834544---268888870765875128121146783689842057887321120114846--9970787534
Q gi|254780606|r 352 RV-AVIPKRNAIGI---ELPNETRETVYLRQIIESRSFSHSKANLALCLGKTISGESVIADLANMPHI--LVAGTTGSGK 425 (744)
Q Consensus 352 ~~-~~~pg~~~~~~---~~p~~~~~~v~~~~~~~~~~~~~~~~~l~~~~g~~~~g~~~~~dl~~~PH~--lvaG~TgsGK 425 (744)
T Consensus 185 RI~Lrv~Gr~-~DiRVSt~Pt~fGERvVMR-LLDK~~~~---l~L~-~LGm~~~~l~~~~~li~rpHGIiLVTGPTGSGK 258 (495)
T TIGR02533 185 RISLRVAGRD-IDIRVSTVPTSFGERVVMR-LLDKDAVR---LDLE-ALGMSPELLSSLERLIKRPHGIILVTGPTGSGK 258 (495)
T ss_pred CEEEEECCEE-EEEEEEECCCCCCCEEEHH-HHCHHHHH---HHHH-HCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCH
T ss_conf 2666673744-6678853058997100000-11204777---7588-648888899999999718896188417789852
Q ss_pred HHHHHHHHHHHHHHCCHHHEEEEEE-CCCCCEECCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 4799999999998568011079997-234210001257752000044441787689999998667699999980778679
Q gi|254780606|r 426 SVAINTMIMSLLYRLRPDECRMIMV-DPKMLELSVYDGIPHLLTPVVTNPKKAVMALKWAVREMEERYRKMSHLSVRNIK 504 (744)
Q Consensus 426 S~~l~~~i~sl~~~~~p~~~~~~li-D~k~~~~~~~~~~ph~~~~v~~~~~~~~~~l~~~~~em~~r~~~~~~~~~~~i~ 504 (744)
T Consensus 259 tTTLYaaL~~---LN~~-~~NIlTvEDP--VEY~i-~GIgQ~Qvn~kIglTFA-~GLRaI----LR-------------- 312 (495)
T TIGR02533 259 TTTLYAALSR---LNTP-ERNILTVEDP--VEYQI-EGIGQIQVNPKIGLTFA-AGLRAI----LR-------------- 312 (495)
T ss_pred HHHHHHHHHH---HCCC-CCCEEEEECC--EEEEE-CCCCEEEECCCCCHHHH-HHHHHH----HC--------------
T ss_conf 5889999986---3589-9715686578--24762-48763651465430388-887886----42--------------
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCC--CC-----
Q ss_conf 99998864202677666543233867999844568767531035899999999964201358999851654--44-----
Q gi|254780606|r 505 SYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPS--VD----- 577 (744)
Q Consensus 505 ~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~--~~----- 577 (744)
T Consensus 313 -------Q-----------D----P-DiiMvGEIRD~-ETA---------~IAiQASLTG-HLVLSTLHTNDAAgAvtRL 358 (495)
T TIGR02533 313 -------Q-----------D----P-DIIMVGEIRDL-ETA---------QIAIQASLTG-HLVLSTLHTNDAAGAVTRL 358 (495)
T ss_pred -------C-----------C----C-CEEEEECCCCH-HHH---------HHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf -------7-----------9----9-88998231606-899---------9999876432-5765565540154466555
Q ss_pred ------------CCHHHHHHCCCCEEEEECCCHHHC----CHHCCCCCHHHHCCCC-CEEEECCC-CCE--------EEE
Q ss_conf ------------414678850563057203681110----0326763168856898-46864689-843--------899
Q gi|254780606|r 578 ------------VITGTIKANFPIRISFQVTSKIDS----RTILGEHGAEQLLGRG-DMLYMSGG-GRI--------QRV 631 (744)
Q Consensus 578 ------------vi~~~ik~n~~~ri~~~v~~~~ds----r~il~~~gae~l~g~g-d~l~~~~~-~~~--------~r~ 631 (744)
T Consensus 359 ~DMGvEPFL~aSsl~GVLAQRLVRrlCp~Cke~y~a~~~~~~~~G~~~~~~~~~nGv~~lyr~~GC~~C~~~GY~GRtGI 438 (495)
T TIGR02533 359 IDMGVEPFLLASSLLGVLAQRLVRRLCPHCKEPYEATDEELALLGISKKEPKKDNGVIILYRPVGCPACNHTGYRGRTGI 438 (495)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCCEEEEECCCCCHHHCCCCCCCCEEE
T ss_conf 32586404899999999986334331514688899897999854884021035776489977876421278888355036
Q ss_pred EECCCCHHHHHHHH
Q ss_conf 93438988999999
Q gi|254780606|r 632 HGPLVSDIEIEKVV 645 (744)
Q Consensus 632 ~~~~~~~~~~~~~~ 645 (744)
T Consensus 439 yElL~vDD~lr~lI 452 (495)
T TIGR02533 439 YELLLVDDDLRSLI 452 (495)
T ss_pred EEEEEECHHHHHHH
T ss_conf 88674355899876