HHsearch alignment for GI: 254780606 and conserved domain: TIGR02746
>TIGR02746 TraC-F-type type-IV secretion system protein TraC; InterPro: IPR014117 The proteins in this entry are found in the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The proteins contain the Walker A and B motifs and so are putative nucleotide triphosphatases..
Probab=96.81 E-value=0.0017 Score=43.03 Aligned_cols=107 Identities=23% Similarity=0.239 Sum_probs=72.6
Q ss_pred CEEEEEHHHHHHHHH-HCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCHHHCCHHCCC
Q ss_conf 679998445687675-3103589999999996420135899985165444414678850563057203681110032676
Q gi|254780606|r 529 PYIVIIVDEMADLMM-VAGKEIEGAIQRLAQMARAAGIHLIMATQRPSVDVITGTIKANFPIRISFQVTSKIDSRTILGE 607 (744)
Q Consensus 529 p~ivvviDE~a~l~~-~~~~~~e~~~~~la~~~ra~GihlilatQrp~~~vi~~~ik~n~~~ri~~~v~~~~dsr~il~~ 607 (744)
T Consensus 734 ~rK~~~iDEAW~Ll~~g~~~~~~~FIE~gyRr~RK~~Ga~~tiTQ~~~-D~~~--dka~~~arA~yaNS---~~~iiL~Q 807 (900)
T TIGR02746 734 RRKILIIDEAWSLLDDGANPQAANFIETGYRRARKYGGAFITITQGIE-DFYS--DKASPEARAAYANS---DWKIILRQ 807 (900)
T ss_pred CCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCEEEEECCEE-HHHC--CCCCHHHHHHHHCC---CEEEEECC
T ss_conf 551676442489874278513589888763201111643689964400-1000--34798899988453---30041278
Q ss_pred C--CHHHHCCCCCEEEECCCCC----EEEEEECCCCHHHH
Q ss_conf 3--1688568984686468984----38999343898899
Q gi|254780606|r 608 H--GAEQLLGRGDMLYMSGGGR----IQRVHGPLVSDIEI 641 (744)
Q Consensus 608 ~--gae~l~g~gd~l~~~~~~~----~~r~~~~~~~~~~~ 641 (744)
T Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~i~sl~~~~~~GfSe~~I 847 (900)
T TIGR02746 808 SAESIEKLKAENPLQFSPFEKRLIKSLRTAKGAGFSELLI 847 (900)
T ss_pred CHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 8647899996389888988999997225356630676676