HHsearch alignment for GI: 254780606 and conserved domain: TIGR02928

>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=96.61  E-value=0.017  Score=36.08  Aligned_cols=276  Identities=16%  Similarity=0.240  Sum_probs=133.4

Q ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHHHCCHH---H-EEEEEECCCCCEECCCCCCCCEEEEEEECHHHHHHHHHHHHHHH
Q ss_conf             8469970787534479999999999856801---1-07999723421000125775200004444178768999999866
Q gi|254780606|r  413 PHILVAGTTGSGKSVAINTMIMSLLYRLRPD---E-CRMIMVDPKMLELSVYDGIPHLLTPVVTNPKKAVMALKWAVREM  488 (744)
Q Consensus       413 PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~---~-~~~~liD~k~~~~~~~~~~ph~~~~v~~~~~~~~~~l~~~~~em  488 (744)
T Consensus        44 ~Ni~iYGkTGtGKT~vt~~v~~~l~-~~~~~~d~~D~~~~~~NC~~~~T-------------------~y~~~~~L~~~l  103 (383)
T TIGR02928        44 SNIFIYGKTGTGKTAVTKYVMKELE-EAAEDRDVRDVSTVYINCQILDT-------------------SYQVLVELANQL  103 (383)
T ss_pred             CCEEEECCCCCCHHHHHHHHHHHHH-HHHHCCCCCCEEEEEECCCCCCC-------------------HHHHHHHHHHHH
T ss_conf             7258878889878899999999999-98622699715899977854684-------------------699999999985


Q ss_pred             H--HHHHHHHHCCCCCHHHHHHHHHHHH-CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHH-----HHHHHHHH--HH
Q ss_conf             7--6999999807786799999886420-2677666543233867999844568767531035-----89999999--99
Q gi|254780606|r  489 E--ERYRKMSHLSVRNIKSYNERISTMY-GEKPQGCGDDMRPMPYIVIIVDEMADLMMVAGKE-----IEGAIQRL--AQ  558 (744)
Q Consensus       489 ~--~r~~~~~~~~~~~i~~~n~~~~~~~-~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~~~-----~e~~~~~l--a~  558 (744)
T Consensus       104 n~~~~~~~vP~tG~s~~~~~~~l~~~l~~~~-----------~~~~~ivLDEiD~Lv~~~~d~PAyS~~LY~L~Ra~~~~  172 (383)
T TIGR02928       104 NRRGSGEEVPTTGLSTSEVFRELYKELNRER-----------GDSLIIVLDEIDKLVRKDDDDPAYSKLLYQLSRARENG  172 (383)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-----------CCEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             1577888898877878999999999983201-----------88799986231022158888807878853433100035


Q ss_pred             HHHCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCHHHCCHHCCCCCHHHH----CCCC-CEEEECCC--CCEEEE
Q ss_conf             6420135899985165444414678850563057203681110032676316885----6898-46864689--843899
Q gi|254780606|r  559 MARAAGIHLIMATQRPSVDVITGTIKANFPIRISFQVTSKIDSRTILGEHGAEQL----LGRG-DMLYMSGG--GRIQRV  631 (744)
Q Consensus       559 ~~ra~GihlilatQrp~~~vi~~~ik~n~~~ri~~~v~~~~dsr~il~~~gae~l----~g~g-d~l~~~~~--~~~~r~  631 (744)
T Consensus       173 ~~~~~~vgvIgISND~~-------f~~~Ld~RVkSsL~---~eei~FpPYdA~eL~~IL~~R~v~~AF~dGvl~d~VI~l  242 (383)
T TIGR02928       173 DLENAKVGVIGISNDLK-------FRENLDPRVKSSLC---EEEIVFPPYDAEELRDILENRAVEKAFYDGVLDDGVIPL  242 (383)
T ss_pred             CCCCCCEEEEEEECCCH-------HHHHCCCCEECCCC---CCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf             77885348999865714-------36445753013248---740040798869999999720312033688546227999


Q ss_pred             EECCCCHHH--HHHHHHHHHHCCCCCCCC---CCCCCCCCCCCCCCCCCCCCC-CCCCHHH-------------HHHH-H
Q ss_conf             934389889--999999998408875311---112455554444566777777-7660389-------------9999-9
Q gi|254780606|r  632 HGPLVSDIE--IEKVVQHLKKQGCPEYLN---TVTTDTDTDKDGNNFDSEEKK-ERSNLYA-------------KAVD-L  691 (744)
Q Consensus       632 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~-~  691 (744)
T Consensus       243 cAA~aAq~hGDAR~AiDLLR~AGe~A~~~g~~~Vt~~HV~~A-------~e~~PE~~r~~e~~~~Lp~h~k~~L~A~~~l  315 (383)
T TIGR02928       243 CAALAAQEHGDARKAIDLLRVAGEIAEREGAERVTEDHVEEA-------QEKIPEVDRVLELIRGLPTHSKLVLLAIANL  315 (383)
T ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH-------HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             999862067878999999998768753157631008889999-------9832228899998607986799999999999


Q ss_pred             HH---HCCCEEEEEEECCCC----------CCHHHHHHHHHHHHHCCCCCHHHCCCCC
Q ss_conf             99---749862322000001----------0078999999999987975702168862
Q gi|254780606|r  692 VI---DNQRCSTSFIQRRLQ----------IGYNRAALLVERMEQEGLVSEADHVGKR  736 (744)
Q Consensus       692 ~~---~~~~~s~s~~qr~~~----------~g~~ra~~~~~~~e~~g~~~~~~~~~~r  736 (744)
T Consensus       316 ~~~~~~~~~~~t~~vY~~Y~~~c~~~~~dpl~~rR~~~~l~eL~~LG~~~~~~~~~G~  373 (383)
T TIGR02928       316 AAESPEEDPFRTGEVYEVYKELCEDIGVDPLTQRRISDLLNELDMLGLVEAEERNKGR  373 (383)
T ss_pred             HHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_conf             8516788736612778999999876267766146799988767660733456774267