HHsearch alignment for GI: 254780606 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=96.61 E-value=0.017 Score=36.08 Aligned_cols=276 Identities=16% Similarity=0.240 Sum_probs=133.4
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHCCHH---H-EEEEEECCCCCEECCCCCCCCEEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 8469970787534479999999999856801---1-07999723421000125775200004444178768999999866
Q gi|254780606|r 413 PHILVAGTTGSGKSVAINTMIMSLLYRLRPD---E-CRMIMVDPKMLELSVYDGIPHLLTPVVTNPKKAVMALKWAVREM 488 (744)
Q Consensus 413 PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~---~-~~~~liD~k~~~~~~~~~~ph~~~~v~~~~~~~~~~l~~~~~em 488 (744)
T Consensus 44 ~Ni~iYGkTGtGKT~vt~~v~~~l~-~~~~~~d~~D~~~~~~NC~~~~T-------------------~y~~~~~L~~~l 103 (383)
T TIGR02928 44 SNIFIYGKTGTGKTAVTKYVMKELE-EAAEDRDVRDVSTVYINCQILDT-------------------SYQVLVELANQL 103 (383)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHH-HHHHCCCCCCEEEEEECCCCCCC-------------------HHHHHHHHHHHH
T ss_conf 7258878889878899999999999-98622699715899977854684-------------------699999999985
Q ss_pred H--HHHHHHHHCCCCCHHHHHHHHHHHH-CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHH-----HHHHHHHH--HH
Q ss_conf 7--6999999807786799999886420-2677666543233867999844568767531035-----89999999--99
Q gi|254780606|r 489 E--ERYRKMSHLSVRNIKSYNERISTMY-GEKPQGCGDDMRPMPYIVIIVDEMADLMMVAGKE-----IEGAIQRL--AQ 558 (744)
Q Consensus 489 ~--~r~~~~~~~~~~~i~~~n~~~~~~~-~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~~~-----~e~~~~~l--a~ 558 (744)
T Consensus 104 n~~~~~~~vP~tG~s~~~~~~~l~~~l~~~~-----------~~~~~ivLDEiD~Lv~~~~d~PAyS~~LY~L~Ra~~~~ 172 (383)
T TIGR02928 104 NRRGSGEEVPTTGLSTSEVFRELYKELNRER-----------GDSLIIVLDEIDKLVRKDDDDPAYSKLLYQLSRARENG 172 (383)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-----------CCEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 1577888898877878999999999983201-----------88799986231022158888807878853433100035
Q ss_pred HHHCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCHHHCCHHCCCCCHHHH----CCCC-CEEEECCC--CCEEEE
Q ss_conf 6420135899985165444414678850563057203681110032676316885----6898-46864689--843899
Q gi|254780606|r 559 MARAAGIHLIMATQRPSVDVITGTIKANFPIRISFQVTSKIDSRTILGEHGAEQL----LGRG-DMLYMSGG--GRIQRV 631 (744)
Q Consensus 559 ~~ra~GihlilatQrp~~~vi~~~ik~n~~~ri~~~v~~~~dsr~il~~~gae~l----~g~g-d~l~~~~~--~~~~r~ 631 (744)
T Consensus 173 ~~~~~~vgvIgISND~~-------f~~~Ld~RVkSsL~---~eei~FpPYdA~eL~~IL~~R~v~~AF~dGvl~d~VI~l 242 (383)
T TIGR02928 173 DLENAKVGVIGISNDLK-------FRENLDPRVKSSLC---EEEIVFPPYDAEELRDILENRAVEKAFYDGVLDDGVIPL 242 (383)
T ss_pred CCCCCCEEEEEEECCCH-------HHHHCCCCEECCCC---CCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 77885348999865714-------36445753013248---740040798869999999720312033688546227999
Q ss_pred EECCCCHHH--HHHHHHHHHHCCCCCCCC---CCCCCCCCCCCCCCCCCCCCC-CCCCHHH-------------HHHH-H
Q ss_conf 934389889--999999998408875311---112455554444566777777-7660389-------------9999-9
Q gi|254780606|r 632 HGPLVSDIE--IEKVVQHLKKQGCPEYLN---TVTTDTDTDKDGNNFDSEEKK-ERSNLYA-------------KAVD-L 691 (744)
Q Consensus 632 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~-~ 691 (744)
T Consensus 243 cAA~aAq~hGDAR~AiDLLR~AGe~A~~~g~~~Vt~~HV~~A-------~e~~PE~~r~~e~~~~Lp~h~k~~L~A~~~l 315 (383)
T TIGR02928 243 CAALAAQEHGDARKAIDLLRVAGEIAEREGAERVTEDHVEEA-------QEKIPEVDRVLELIRGLPTHSKLVLLAIANL 315 (383)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH-------HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 999862067878999999998768753157631008889999-------9832228899998607986799999999999
Q ss_pred HH---HCCCEEEEEEECCCC----------CCHHHHHHHHHHHHHCCCCCHHHCCCCC
Q ss_conf 99---749862322000001----------0078999999999987975702168862
Q gi|254780606|r 692 VI---DNQRCSTSFIQRRLQ----------IGYNRAALLVERMEQEGLVSEADHVGKR 736 (744)
Q Consensus 692 ~~---~~~~~s~s~~qr~~~----------~g~~ra~~~~~~~e~~g~~~~~~~~~~r 736 (744)
T Consensus 316 ~~~~~~~~~~~t~~vY~~Y~~~c~~~~~dpl~~rR~~~~l~eL~~LG~~~~~~~~~G~ 373 (383)
T TIGR02928 316 AAESPEEDPFRTGEVYEVYKELCEDIGVDPLTQRRISDLLNELDMLGLVEAEERNKGR 373 (383)
T ss_pred HHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_conf 8516788736612778999999876267766146799988767660733456774267