HHsearch alignment for GI: 254780606 and conserved domain: cd01129
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP). It is responsible for the export the majority of Gram-negative bacterial exoenzymes and toxins. PulE is a cytoplasmic protein of the GSP, which contains an ATP binding site and a tetracysteine motif. This subgroup also includes PillB and HofB.
Probab=95.20 E-value=0.034 Score=34.07 Aligned_cols=56 Identities=34% Similarity=0.554 Sum_probs=33.0
Q ss_pred EEECCCCCEEECCHHHCCC--EEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEE-EECCCCC
Q ss_conf 4205788732112011484--6997078753447999999999985680110799-9723421
Q gi|254780606|r 396 LGKTISGESVIADLANMPH--ILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMI-MVDPKML 455 (744)
Q Consensus 396 ~g~~~~g~~~~~dl~~~PH--~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~-liD~k~~ 455 (744)
T Consensus 62 LG~~~~~~~~l~~~~~~~~GlilitGptGSGKtTtl~a~l~~~---~~~~-~~i~tiEdPvE~ 120 (264)
T cd01129 62 LGLKPENLEIFRKLLEKPHGIILVTGPTGSGKTTTLYSALSEL---NTPE-KNIITVEDPVEY 120 (264)
T ss_pred HCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH---CCCC-CEEEEEECCCCC
T ss_conf 5799999999999970899889997899997799999999864---3688-508998676314