HHsearch alignment for GI: 254780606 and conserved domain: cd01131
>cd01131 PilT Pilus retraction ATPase PilT. PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.
Probab=96.79 E-value=0.0031 Score=41.21 Aligned_cols=37 Identities=35% Similarity=0.546 Sum_probs=25.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEE-ECCCC
Q ss_conf 69970787534479999999999856801107999-72342
Q gi|254780606|r 415 ILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIM-VDPKM 454 (744)
Q Consensus 415 ~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~l-iD~k~ 454 (744)
T Consensus 4 iLitG~TGSGKTTtl~all~~i---~~~~~~~IiTiEDPiE 41 (198)
T cd01131 4 VLVTGPTGSGKSTTLAAMIDYI---NKNKTHHILTIEDPIE 41 (198)
T ss_pred EEEECCCCCCHHHHHHHHHHHH---CCCCCCEEEEECCCHH
T ss_conf 9998999997999999999853---6378836999647377