HHsearch alignment for GI: 254780606 and conserved domain: cd01393

>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.

Probab=96.06  E-value=0.13  Score=30.16  Aligned_cols=40  Identities=18%  Similarity=0.179  Sum_probs=26.3

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHHCC--HHHEEEEEECCC
Q ss_conf             4699707875344799999999998568--011079997234
Q gi|254780606|r  414 HILVAGTTGSGKSVAINTMIMSLLYRLR--PDECRMIMVDPK  453 (744)
Q Consensus       414 H~lvaG~TgsGKS~~l~~~i~sl~~~~~--p~~~~~~liD~k  453 (744)
T Consensus        21 ItEi~G~~gsGKT~l~lqla~~~q~~~~~~~~~g~vvyIDtE   62 (226)
T cd01393          21 ITEIFGEFGSGKTQLCLQLAVEAQLPGELGGLEGKVVYIDTE   62 (226)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
T ss_conf             999999999989999999999985422116999619999557