HHsearch alignment for GI: 254780606 and conserved domain: cd03217
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=93.32 E-value=0.48 Score=26.14 Aligned_cols=47 Identities=23% Similarity=0.369 Sum_probs=29.1
Q ss_pred CCCEEECCH----HHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEE
Q ss_conf 887321120----1148469970787534479999999999856801107999
Q gi|254780606|r 401 SGESVIADL----ANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIM 449 (744)
Q Consensus 401 ~g~~~~~dl----~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~l 449 (744)
T Consensus 11 g~~~vL~~vsl~v~~Gei~~iiGpnGaGKSTLl~~-i~G~~-~~~~~~G~I~~ 61 (200)
T cd03217 11 GGKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKT-IMGHP-KYEVTEGEILF 61 (200)
T ss_pred CCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHH-HCCCC-CCCCCCCEEEE
T ss_conf 99998855056887998999996899999999999-70777-77852007999