>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=95.31  E-value=0.068  Score=31.99  Aligned_cols=40  Identities=20%  Similarity=0.446  Sum_probs=27.0

Q ss_pred             ECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEE
Q ss_conf             11201148469970787534479999999999856801107999
Q gi|254780606|r  406 IADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIM  449 (744)
Q Consensus       406 ~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~l  449 (744)
T Consensus        22 sl~i~~Ge~i~ivG~sGsGKSTLl~l-l~gl~---~p~~G~I~i   61 (171)
T cd03228          22 SLTIKPGEKVAIVGPSGSGKSTLLKL-LLRLY---DPTSGEILI   61 (171)
T ss_pred             EEEECCCCEEEEECCCCCHHHHHHHH-HHCCC---CCCCCEEEE
T ss_conf             89985998999999999839999999-97677---589748999