HHsearch alignment for GI: 254780606 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=91.62 E-value=0.21 Score=28.56 Aligned_cols=42 Identities=26% Similarity=0.371 Sum_probs=30.4
Q ss_pred EEECCCCCEEECCH----HHCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 42057887321120----11484699707875344799999999998
Q gi|254780606|r 396 LGKTISGESVIADL----ANMPHILVAGTTGSGKSVAINTMIMSLLY 438 (744)
Q Consensus 396 ~g~~~~g~~~~~dl----~~~PH~lvaG~TgsGKS~~l~~~i~sl~~ 438 (744)
T Consensus 6 ls~~~g~~~il~~vs~~i~~Ge~~~l~G~NGsGKSTLlk~-i~Gl~~ 51 (201)
T cd03231 6 LTCERDGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRI-LAGLSP 51 (201)
T ss_pred EEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHH-HHCCCC
T ss_conf 9999999999953078887995999999999999999999-966778