HHsearch alignment for GI: 254780606 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=95.45 E-value=0.026 Score=34.87 Aligned_cols=58 Identities=17% Similarity=0.265 Sum_probs=34.4
Q ss_pred EEECCCCCEEECCH----HHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCC
Q ss_conf 42057887321120----1148469970787534479999999999856801107999723421
Q gi|254780606|r 396 LGKTISGESVIADL----ANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKML 455 (744)
Q Consensus 396 ~g~~~~g~~~~~dl----~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~ 455 (744)
T Consensus 10 f~Y~~~~~~~L~~isl~i~~G~~v~ivG~sGsGKSTLl~l-l~gl-~~p~~G~I~i~g~~~~~~ 71 (220)
T cd03245 10 FSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKL-LAGL-YKPTSGSVLLDGTDIRQL 71 (220)
T ss_pred EEECCCCCCCEECEEEEECCCCEEEEECCCCCHHHHHHHH-HHCC-CCCCCCEEEECCEEHHHH
T ss_conf 9969899851534599987999999999999859999999-9672-547865899999995772