HHsearch alignment for GI: 254780606 and conserved domain: cd03255

>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=95.78  E-value=0.028  Score=34.64  Aligned_cols=163  Identities=20%  Similarity=0.307  Sum_probs=76.4

Q ss_pred             EECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEE-------------C-CCCCCCCEEE--
Q ss_conf             21120114846997078753447999999999985680110799972342100-------------0-1257752000--
Q gi|254780606|r  405 VIADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLEL-------------S-VYDGIPHLLT--  468 (744)
Q Consensus       405 ~~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~-------------~-~~~~~ph~~~--  468 (744)
T Consensus        23 isl~i~~Ge~~~iiG~sGsGKTTll~-~i~Gl~---~p~~G~I~~~g~~i~~~~~~~~~~~rr~~Ig~v~Q~-~~L~~~l   97 (218)
T cd03255          23 VSLSIEKGEFVAIVGPSGSGKSTLLN-ILGGLD---RPTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQS-FNLLPDL   97 (218)
T ss_pred             EEEEECCCCEEEEECCCCCHHHHHHH-HHHCCC---CCCCEEEEECCEECCCCCHHHHHHHHHCCEEEECCC-CCCCCCC
T ss_conf             28998699899999999986999999-996699---999649999999988799899999865047898667-5215564


Q ss_pred             EEEECHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCHHH---------HHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHH
Q ss_conf             04444178768999999866769-99999807786799---------999886420267766654323386799984456
Q gi|254780606|r  469 PVVTNPKKAVMALKWAVREMEER-YRKMSHLSVRNIKS---------YNERISTMYGEKPQGCGDDMRPMPYIVIIVDEM  538 (744)
Q Consensus       469 ~v~~~~~~~~~~l~~~~~em~~r-~~~~~~~~~~~i~~---------~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~  538 (744)
T Consensus        98 tV~eni~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~LSGG~kQRv~iAraL---------~~~P~-llllDEP  167 (218)
T cd03255          98 TALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARAL---------ANDPK-IILADEP  167 (218)
T ss_pred             CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHH---------HCCCC-EEEEECC
T ss_conf             3999999999984999899999999876767937887388763899999999999998---------55999-9998188


Q ss_pred             HH-HHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEE
Q ss_conf             87-67531035899999999964201358999851654444146788505630572
Q gi|254780606|r  539 AD-LMMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPSVDVITGTIKANFPIRISF  593 (744)
Q Consensus       539 a~-l~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~~~vi~~~ik~n~~~ri~~  593 (744)
T Consensus       168 Ts~LD~~~---~~~i~~~l~~l~~~~~~tii~itHd~~--~~------~~aDrv~~  212 (218)
T cd03255         168 TGNLDSET---GKEVMELLRELNKEAGTTIVVVTHDPE--LA------EYADRIIE  212 (218)
T ss_pred             CCCCCHHH---HHHHHHHHHHHHHHCCCEEEEECCCHH--HH------HHCCEEEE
T ss_conf             87689999---999999999999962989999896889--99------86998999