HHsearch alignment for GI: 254780606 and conserved domain: cd03258

>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.46  E-value=0.015  Score=36.53  Aligned_cols=164  Identities=19%  Similarity=0.265  Sum_probs=78.8

Q ss_pred             EECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEE--CC---CC-----------CEECCCCCCCCEEE
Q ss_conf             2112011484699707875344799999999998568011079997--23---42-----------10001257752000
Q gi|254780606|r  405 VIADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMV--DP---KM-----------LELSVYDGIPHLLT  468 (744)
Q Consensus       405 ~~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~li--D~---k~-----------~~~~~~~~~ph~~~  468 (744)
T Consensus        24 vsl~i~~Ge~~~ivG~SGsGKSTllr-~i~gL~---~p~sG~I~~~g~~i~~~~~~~~~~~Rr~ig~VFQ~~~L~~~~--   97 (233)
T cd03258          24 VSLSVPKGEIFGIIGRSGAGKSTLIR-CINGLE---RPTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSR--   97 (233)
T ss_pred             CEEEECCCCEEEEECCCCCHHHHHHH-HHHCCC---CCCCCEEEECCEECCCCCHHHHHHHHCCCCEEECCCCCCCCC--
T ss_conf             28899999999998898058999999-996799---999808999999989799999999862587794377889988--


Q ss_pred             EEEECHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCHHH-H--------HHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHH
Q ss_conf             04444178768999999866769-99999807786799-9--------99886420267766654323386799984456
Q gi|254780606|r  469 PVVTNPKKAVMALKWAVREMEER-YRKMSHLSVRNIKS-Y--------NERISTMYGEKPQGCGDDMRPMPYIVIIVDEM  538 (744)
Q Consensus       469 ~v~~~~~~~~~~l~~~~~em~~r-~~~~~~~~~~~i~~-~--------n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~  538 (744)
T Consensus        98 tv~~nv~~~l~~~~~~~~~~~~r~~~lL~~vgL~~~~~~yP~eLSGGq~QRVaIARAL---------~~~P~l-llaDEP  167 (233)
T cd03258          98 TVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARAL---------ANNPKV-LLCDEA  167 (233)
T ss_pred             CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHH---------HCCCCE-EEECCC
T ss_conf             3999999999974999999999999999867991676269652677888999999998---------339989-996597


Q ss_pred             H-HHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEEE
Q ss_conf             8-7675310358999999999642013589998516544441467885056305720
Q gi|254780606|r  539 A-DLMMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPSVDVITGTIKANFPIRISFQ  594 (744)
Q Consensus       539 a-~l~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~~~vi~~~ik~n~~~ri~~~  594 (744)
T Consensus       168 Ts~LD~~~~~~il~---ll~~l~~e~g~t~i~vTHDl~--~~-----~~~adrv~vm  214 (233)
T cd03258         168 TSALDPETTQSILA---LLRDINRELGLTIVLITHEME--VV-----KRICDRVAVM  214 (233)
T ss_pred             CCCCCHHHHHHHHH---HHHHHHHHHCCEEEEECCCHH--HH-----HHHCCEEEEE
T ss_conf             66469889999999---999999972989999898999--99-----9869979999