HHsearch alignment for GI: 254780606 and conserved domain: cd03258
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.46 E-value=0.015 Score=36.53 Aligned_cols=164 Identities=19% Similarity=0.265 Sum_probs=78.8
Q ss_pred EECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEE--CC---CC-----------CEECCCCCCCCEEE
Q ss_conf 2112011484699707875344799999999998568011079997--23---42-----------10001257752000
Q gi|254780606|r 405 VIADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMV--DP---KM-----------LELSVYDGIPHLLT 468 (744)
Q Consensus 405 ~~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~li--D~---k~-----------~~~~~~~~~ph~~~ 468 (744)
T Consensus 24 vsl~i~~Ge~~~ivG~SGsGKSTllr-~i~gL~---~p~sG~I~~~g~~i~~~~~~~~~~~Rr~ig~VFQ~~~L~~~~-- 97 (233)
T cd03258 24 VSLSVPKGEIFGIIGRSGAGKSTLIR-CINGLE---RPTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSR-- 97 (233)
T ss_pred CEEEECCCCEEEEECCCCCHHHHHHH-HHHCCC---CCCCCEEEECCEECCCCCHHHHHHHHCCCCEEECCCCCCCCC--
T ss_conf 28899999999998898058999999-996799---999808999999989799999999862587794377889988--
Q ss_pred EEEECHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCHHH-H--------HHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHH
Q ss_conf 04444178768999999866769-99999807786799-9--------99886420267766654323386799984456
Q gi|254780606|r 469 PVVTNPKKAVMALKWAVREMEER-YRKMSHLSVRNIKS-Y--------NERISTMYGEKPQGCGDDMRPMPYIVIIVDEM 538 (744)
Q Consensus 469 ~v~~~~~~~~~~l~~~~~em~~r-~~~~~~~~~~~i~~-~--------n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~ 538 (744)
T Consensus 98 tv~~nv~~~l~~~~~~~~~~~~r~~~lL~~vgL~~~~~~yP~eLSGGq~QRVaIARAL---------~~~P~l-llaDEP 167 (233)
T cd03258 98 TVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARAL---------ANNPKV-LLCDEA 167 (233)
T ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHH---------HCCCCE-EEECCC
T ss_conf 3999999999974999999999999999867991676269652677888999999998---------339989-996597
Q ss_pred H-HHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEEE
Q ss_conf 8-7675310358999999999642013589998516544441467885056305720
Q gi|254780606|r 539 A-DLMMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPSVDVITGTIKANFPIRISFQ 594 (744)
Q Consensus 539 a-~l~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~~~vi~~~ik~n~~~ri~~~ 594 (744)
T Consensus 168 Ts~LD~~~~~~il~---ll~~l~~e~g~t~i~vTHDl~--~~-----~~~adrv~vm 214 (233)
T cd03258 168 TSALDPETTQSILA---LLRDINRELGLTIVLITHEME--VV-----KRICDRVAVM 214 (233)
T ss_pred CCCCCHHHHHHHHH---HHHHHHHHHCCEEEEECCCHH--HH-----HHHCCEEEEE
T ss_conf 66469889999999---999999972989999898999--99-----9869979999