HHsearch alignment for GI: 254780606 and conserved domain: cd03260

>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=91.50  E-value=0.33  Score=27.25  Aligned_cols=151  Identities=18%  Similarity=0.258  Sum_probs=71.9

Q ss_pred             CCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHH--CCHHHEEEEEE--CCCCCE---------ECCCCCCCCEEEEEEEC
Q ss_conf             120114846997078753447999999999985--68011079997--234210---------00125775200004444
Q gi|254780606|r  407 ADLANMPHILVAGTTGSGKSVAINTMIMSLLYR--LRPDECRMIMV--DPKMLE---------LSVYDGIPHLLTPVVTN  473 (744)
Q Consensus       407 ~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~--~~p~~~~~~li--D~k~~~---------~~~~~~~ph~~~~v~~~  473 (744)
T Consensus        21 l~i~~Ge~~~iiG~SGsGKSTll~-~i~gL~~~~~~~p~~G~I~~~g~~i~~~~~~~~~~R~~ig~VfQ~~~lf~--~TV   97 (227)
T cd03260          21 LDIPKGEITALIGPSGCGKSTLLR-LLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPNPFP--GSI   97 (227)
T ss_pred             EEECCCCEEEEECCCCCCHHHHHH-HHHHHHHCCCCCCCCEEEEECCEECCCCCCCHHHHHHCCEEECCCCCCCC--CCH
T ss_conf             788799899999999981999999-99744502689981469999999998899587889628268764776677--809


Q ss_pred             HHHHHHHHHH----HHHHHHHH-HHHHHHCCCCC----------HH-HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHH
Q ss_conf             1787689999----99866769-99999807786----------79-999988642026776665432338679998445
Q gi|254780606|r  474 PKKAVMALKW----AVREMEER-YRKMSHLSVRN----------IK-SYNERISTMYGEKPQGCGDDMRPMPYIVIIVDE  537 (744)
Q Consensus       474 ~~~~~~~l~~----~~~em~~r-~~~~~~~~~~~----------i~-~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE  537 (744)
T Consensus        98 ~eNi~~~l~~~~~~~~~~~~~~v~~~L~~vgL~~~~~~~~~p~~LSGGq~QRvaIArAL---------~~~P~i-LllDE  167 (227)
T cd03260          98 YDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLARAL---------ANEPEV-LLLDE  167 (227)
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHH---------HCCCCE-EEECC
T ss_conf             99999999983899999999999999987799758844568022899999999999998---------359999-99689


Q ss_pred             H-HHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCC
Q ss_conf             6-8767531035899999999964201358999851654
Q gi|254780606|r  538 M-ADLMMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPS  575 (744)
Q Consensus       538 ~-a~l~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~  575 (744)
T Consensus       168 PTs~LD~~~~~~i~~li~~l~~~-----~Tii~vTHdl~  201 (227)
T cd03260         168 PTSALDPISTAKIEELIAELKKE-----YTIVIVTHNMQ  201 (227)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHC-----CEEEEEECCHH
T ss_conf             87657989999999999999668-----88999936999