HHsearch alignment for GI: 254780606 and conserved domain: cd03261
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.45 E-value=0.085 Score=31.30 Aligned_cols=152 Identities=24% Similarity=0.360 Sum_probs=73.3
Q ss_pred EECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEE--CCCC---CEE--------CCCCCCCCEEEEEE
Q ss_conf 2112011484699707875344799999999998568011079997--2342---100--------01257752000044
Q gi|254780606|r 405 VIADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMV--DPKM---LEL--------SVYDGIPHLLTPVV 471 (744)
Q Consensus 405 ~~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~li--D~k~---~~~--------~~~~~~ph~~~~v~ 471 (744)
T Consensus 19 isl~i~~Ge~~~iiG~SGsGKSTll~~-i~gL~---~p~~G~I~~~g~~i~~~~~~~~~~~r~~ig~vfQ~-~~Lf-~~l 92 (235)
T cd03261 19 VDLDVRRGEILAIIGPSGSGKSTLLRL-IVGLL---RPDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQS-GALF-DSL 92 (235)
T ss_pred EEEEECCCCEEEEECCCCCHHHHHHHH-HHCCC---CCCCCEEEECCEECCCCCHHHHHHHHCCEEEEECC-CCCC-CCC
T ss_conf 064887998999999999729999999-97599---98985899999999989988999975782997049-8658-999
Q ss_pred ECHHHHHHHHH----HHHHHHHHH-HHHHHHCCCCCHHH---------HHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHH
Q ss_conf 44178768999----999866769-99999807786799---------99988642026776665432338679998445
Q gi|254780606|r 472 TNPKKAVMALK----WAVREMEER-YRKMSHLSVRNIKS---------YNERISTMYGEKPQGCGDDMRPMPYIVIIVDE 537 (744)
Q Consensus 472 ~~~~~~~~~l~----~~~~em~~r-~~~~~~~~~~~i~~---------~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE 537 (744)
T Consensus 93 Tv~eNv~~~l~~~~~~~~~~~~~r~~~~L~~vgL~~~~~~~p~~LSGGq~QRvaIARALv---------~~P~i-lllDE 162 (235)
T cd03261 93 TVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALA---------LDPEL-LLYDE 162 (235)
T ss_pred CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---------CCCCE-EEEEC
T ss_conf 699999999999579999999999999998679925764784106999999999999985---------48998-99808
Q ss_pred -HHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCC
Q ss_conf -68767531035899999999964201358999851654
Q gi|254780606|r 538 -MADLMMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPS 575 (744)
Q Consensus 538 -~a~l~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~ 575 (744)
T Consensus 163 Pts~LDp~~~~~i~~li---~~l~~~~g~T~i~vTHd~~ 198 (235)
T cd03261 163 PTAGLDPIASGVIDDLI---RSLKKELGLTSIMVTHDLD 198 (235)
T ss_pred CCCCCCHHHHHHHHHHH---HHHHHHHCCEEEEECCCHH
T ss_conf 86647989999999999---9999972999999898989